RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 HAUS3Q68CZ6 603 aa23.15■■□□□ 1.3
VARS-218ENST00000459667 CATSPER3Q86XQ3 398 aa23.15■■□□□ 1.3
VARS-218ENST00000459667 RHPN2Q8IUC4 686 aa23.15■■□□□ 1.3
VARS-218ENST00000459667 GAS2L1Q99501 681 aaPredicted RBP23.15■■□□□ 1.3
VARS-218ENST00000459667 POLR3CQ9BUI4 534 aaPredicted RBP23.15■■□□□ 1.3
VARS-218ENST00000459667 FOXD4L1Q9NU39 408 aa23.15■■□□□ 1.3
VARS-218ENST00000459667 MYO9BQ13459 2157 aa23.14■■□□□ 1.3
VARS-218ENST00000459667 DENND3A2RUS2 1198 aa23.14■■□□□ 1.29
VARS-218ENST00000459667 LINC01553A4QN01 128 aa23.14■■□□□ 1.29
VARS-218ENST00000459667 GAS2O43903 313 aaKnown RBP23.14■■□□□ 1.29
VARS-218ENST00000459667 MGEA5O60502 916 aa23.14■■□□□ 1.29
VARS-218ENST00000459667 DARSP14868 501 aaKnown RBP23.14■■□□□ 1.29
VARS-218ENST00000459667 ZNF410Q86VK4 478 aa23.14■■□□□ 1.29
VARS-218ENST00000459667 SP7Q8TDD2 431 aaPredicted RBP23.14■■□□□ 1.29
VARS-218ENST00000459667 PIGOQ8TEQ8 1089 aa23.14■■□□□ 1.29
VARS-218ENST00000459667 TMEM143Q96AN5 459 aa23.14■■□□□ 1.29
VARS-218ENST00000459667 MTRQ99707 1265 aa23.14■■□□□ 1.29
VARS-218ENST00000459667 GCOM2Q9BZD3 368 aaPredicted RBP23.14■■□□□ 1.29
VARS-218ENST00000459667 RAB34Q9BZG1 259 aa23.14■■□□□ 1.29
VARS-218ENST00000459667 LRWD1Q9UFC0 647 aa23.14■■□□□ 1.29
VARS-218ENST00000459667 COL4A6Q14031 1691 aa23.13■■□□□ 1.29
VARS-218ENST00000459667 A0A087WZ62 844 aa23.13■■□□□ 1.29
VARS-218ENST00000459667 RPA1P27694 616 aa23.13■■□□□ 1.29
VARS-218ENST00000459667 PRPHP41219 470 aa23.13■■□□□ 1.29
VARS-218ENST00000459667 RARRES1P49788 294 aa23.13■■□□□ 1.29
VARS-218ENST00000459667 BRAPQ7Z569 592 aa23.13■■□□□ 1.29
VARS-218ENST00000459667 SPRED2Q7Z698 418 aa23.13■■□□□ 1.29
VARS-218ENST00000459667 PSPC1Q8WXF1 523 aaKnown RBP23.13■■□□□ 1.29
VARS-218ENST00000459667 ARNTL2Q8WYA1 636 aa23.13■■□□□ 1.29
VARS-218ENST00000459667 NLRP4Q96MN2 994 aa23.13■■□□□ 1.29
VARS-218ENST00000459667 ADAM2Q99965 735 aa23.13■■□□□ 1.29
VARS-218ENST00000459667 FDXACB1Q9BRP7 624 aaPredicted RBP23.13■■□□□ 1.29
VARS-218ENST00000459667 COL4A3BPQ9Y5P4 624 aa23.13■■□□□ 1.29
VARS-218ENST00000459667 CDH23Q9H251 3354 aa23.12■■□□□ 1.29
VARS-218ENST00000459667 DGAT1O75907 488 aa23.12■■□□□ 1.29
VARS-218ENST00000459667 XRCC6P12956 609 aaKnown RBP eCLIP23.12■■□□□ 1.29
VARS-218ENST00000459667 ATP2C1P98194 919 aaPredicted RBP23.12■■□□□ 1.29
VARS-218ENST00000459667 PDIA5Q14554 519 aa23.12■■□□□ 1.29
VARS-218ENST00000459667 POTEGQ6S5H5 508 aa23.12■■□□□ 1.29
VARS-218ENST00000459667 FERMT3Q86UX7 667 aa23.12■■□□□ 1.29
VARS-218ENST00000459667 NPAS4Q8IUM7 802 aa23.12■■□□□ 1.29
VARS-218ENST00000459667 KSR1Q8IVT5 923 aa23.12■■□□□ 1.29
VARS-218ENST00000459667 IGSF22Q8N9C0 903 aa23.12■■□□□ 1.29
VARS-218ENST00000459667 TCP11Q8WWU5 503 aa23.12■■□□□ 1.29
VARS-218ENST00000459667 ATP6V0A4Q9HBG4 840 aa23.12■■□□□ 1.29
VARS-218ENST00000459667 XPNPEP1Q9NQW7 623 aa23.12■■□□□ 1.29
VARS-218ENST00000459667 RGS18Q9NS28 235 aa23.12■■□□□ 1.29
VARS-218ENST00000459667 C1orf112Q9NSG2 853 aa23.12■■□□□ 1.29
VARS-218ENST00000459667 A0A087WWV3 80 aa23.11■■□□□ 1.29
VARS-218ENST00000459667 STAG3L1P0CL83 205 aa23.11■■□□□ 1.29
VARS-218ENST00000459667 SYT1P21579 422 aa23.11■■□□□ 1.29
VARS-218ENST00000459667 IBSPP21815 317 aaPredicted RBP23.11■■□□□ 1.29
VARS-218ENST00000459667 FGFR4P22455 802 aa23.11■■□□□ 1.29
VARS-218ENST00000459667 CCT6AP40227 531 aaKnown RBP23.11■■□□□ 1.29
VARS-218ENST00000459667 DTHD1Q6ZMT9 781 aa23.11■■□□□ 1.29
VARS-218ENST00000459667 PRPF31Q8WWY3 499 aaKnown RBP23.11■■□□□ 1.29
VARS-218ENST00000459667 NACC1Q96RE7 527 aa23.11■■□□□ 1.29
VARS-218ENST00000459667 TGS1Q96RS0 853 aaKnown RBP23.11■■□□□ 1.29
VARS-218ENST00000459667 STK24Q9Y6E0 443 aa23.11■■□□□ 1.29
VARS-218ENST00000459667 EPOPA6NHQ4 379 aa23.1■■□□□ 1.29
VARS-218ENST00000459667 CSDE1O75534 798 aaKnown RBP23.1■■□□□ 1.29
VARS-218ENST00000459667 MUTP22033 750 aa23.1■■□□□ 1.29
VARS-218ENST00000459667 SFPQP23246 707 aaKnown RBP eCLIP23.1■■□□□ 1.29
VARS-218ENST00000459667 SARSP49591 514 aaKnown RBP23.1■■□□□ 1.29
VARS-218ENST00000459667 ADGRE1Q14246 886 aa23.1■■□□□ 1.29
VARS-218ENST00000459667 DSC3Q14574 896 aa23.1■■□□□ 1.29
VARS-218ENST00000459667 IL17AQ16552 155 aa23.1■■□□□ 1.29
VARS-218ENST00000459667 MAFAQ8NHW3 353 aaPredicted RBP23.1■■□□□ 1.29
VARS-218ENST00000459667 SNX29Q8TEQ0 813 aa23.1■■□□□ 1.29
VARS-218ENST00000459667 INO80BQ9C086 356 aaPredicted RBP23.1■■□□□ 1.29
VARS-218ENST00000459667 RC3H2Q9HBD1 1191 aaKnown RBP23.1■■□□□ 1.29
VARS-218ENST00000459667 DBR1Q9UK59 544 aaKnown RBP23.1■■□□□ 1.29
VARS-218ENST00000459667 MTUS1Q9ULD2 1270 aa23.1■■□□□ 1.29
VARS-218ENST00000459667 LRFN2Q9ULH4 789 aa23.1■■□□□ 1.29
VARS-218ENST00000459667 COL4A4P53420 1690 aaPredicted RBP23.09■■□□□ 1.29
VARS-218ENST00000459667 ADGRA3Q8IWK6 1321 aa23.09■■□□□ 1.29
VARS-218ENST00000459667 RFXAPO00287 272 aa23.09■■□□□ 1.29
VARS-218ENST00000459667 USO1O60763 962 aaKnown RBP23.09■■□□□ 1.29
VARS-218ENST00000459667 ZSCAN20P17040 1043 aaPredicted RBP23.09■■□□□ 1.29
VARS-218ENST00000459667 ERVK-21P61565 698 aa23.09■■□□□ 1.29
VARS-218ENST00000459667 LAMTOR4Q0VGL1 99 aa23.09■■□□□ 1.29
VARS-218ENST00000459667 SLC24A5Q71RS6 500 aa23.09■■□□□ 1.29
VARS-218ENST00000459667 CRIPAKQ8N1N5 446 aa23.09■■□□□ 1.29
VARS-218ENST00000459667 CHD7Q9P2D1 2997 aa23.09■■□□□ 1.29
VARS-218ENST00000459667 C9IYK1 514 aa23.08■■□□□ 1.29
VARS-218ENST00000459667 ASAP2O43150 1006 aa23.08■■□□□ 1.29
VARS-218ENST00000459667 DGKIO75912 1065 aa23.08■■□□□ 1.29
VARS-218ENST00000459667 HSP90AA1P07900 732 aaKnown RBP23.08■■□□□ 1.29
VARS-218ENST00000459667 SRGAP2CP0DJJ0 459 aa23.08■■□□□ 1.29
VARS-218ENST00000459667 IGFBP4P22692 258 aa23.08■■□□□ 1.29
VARS-218ENST00000459667 KRT79Q5XKE5 535 aa23.08■■□□□ 1.29
VARS-218ENST00000459667 FIBCD1Q8N539 461 aa23.08■■□□□ 1.29
VARS-218ENST00000459667 ZNF689Q96CS4 500 aaPredicted RBP23.08■■□□□ 1.29
VARS-218ENST00000459667 C17orf80Q9BSJ5 609 aa23.08■■□□□ 1.29
VARS-218ENST00000459667 IFT122Q9HBG6 1241 aa23.08■■□□□ 1.29
VARS-218ENST00000459667 RNF216Q9NWF9 866 aaPredicted RBP23.08■■□□□ 1.29
VARS-218ENST00000459667 PCDHB7Q9Y5E2 793 aa23.08■■□□□ 1.29
VARS-218ENST00000459667 NLRC5Q86WI3 1866 aa23.07■■□□□ 1.28
VARS-218ENST00000459667 PP2D1A8MPX8 630 aa23.07■■□□□ 1.28
VARS-218ENST00000459667 MXD4Q14582 209 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms