RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ERVK-5Q9HDB9 667 aa17.76■□□□□ 0.43
CHCHD3-204ENST00000457942 NRBP2Q9NSY0 501 aa17.76■□□□□ 0.43
CHCHD3-204ENST00000457942 RNF216Q9NWF9 866 aaPredicted RBP17.76■□□□□ 0.43
CHCHD3-204ENST00000457942 PCDHB7Q9Y5E2 793 aa17.76■□□□□ 0.43
CHCHD3-204ENST00000457942 MYO15AQ9UKN7 3530 aa17.76■□□□□ 0.43
CHCHD3-204ENST00000457942 PLXNA4Q9HCM2 1894 aa17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 LOC730098B7Z3J9 87 aa17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 TDP2O95551 362 aa17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 SARSP49591 514 aaKnown RBP17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 CRYBB1P53674 252 aaPredicted RBP17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 NONOQ15233 471 aaKnown RBP eCLIP17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 BMP8AQ7Z5Y6 402 aa17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 LRRC71Q8N4P6 559 aa17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 POF1BQ8WVV4 589 aa17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 TMEM40Q8WWA1 233 aa17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 SLC5A5Q92911 643 aa17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 AIFM3Q96NN9 605 aa17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 ADAM2Q99965 735 aa17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 PLVAPQ9BX97 442 aa17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 SLKQ9H2G2 1235 aaPredicted RBP17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 SEPT9Q9UHD8 586 aaPredicted RBP17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 ST3GAL5Q9UNP4 418 aa17.75■□□□□ 0.43
CHCHD3-204ENST00000457942 CCDC194A0A1B0GVG4 234 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 PER2O15055 1255 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 EYA4O95677 639 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 XBP1P17861 261 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 TBC1D8BQ0IIM8 1120 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 Q4G0T1 1027 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 GALNT17Q6IS24 598 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 EFCAB12Q6NXP0 572 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 KRT25Q7Z3Z0 450 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 FAM228AQ86W67 206 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 EFHBQ8N7U6 833 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 DAGLBQ8NCG7 672 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 SPPL3Q8TCT6 385 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 ATOH1Q92858 354 aaPredicted RBP17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 APOL5Q9BWW9 433 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 C1orf112Q9NSG2 853 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 KCNJ14Q9UNX9 436 aa17.74■□□□□ 0.43
CHCHD3-204ENST00000457942 ZDBF2Q9HCK1 2354 aa17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 TBKBP1A7MCY6 615 aa17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 H0Y858 1186 aa17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 ZNF862O60290 1169 aa17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 MGEA5O60502 916 aa17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 PDGFBP01127 241 aaPredicted RBP17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 NLRP11P59045 1033 aaKnown RBP17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 SCRN1Q12765 414 aa17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 UGCGQ16739 394 aa17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 INF2Q27J81 1249 aa17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 LETM2Q2VYF4 491 aa17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 FAM177A1Q8N128 213 aaPredicted RBP17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 ZNF668Q96K58 619 aaPredicted RBP17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 TLR9Q9NR96 1032 aa17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 DDX25Q9UHL0 483 aaKnown RBP17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 FNDC1Q4ZHG4 1894 aaPredicted RBP17.73■□□□□ 0.43
CHCHD3-204ENST00000457942 EDIL3O43854 480 aa17.72■□□□□ 0.43
CHCHD3-204ENST00000457942 GPR32O75388 356 aa17.72■□□□□ 0.43
CHCHD3-204ENST00000457942 SIGLEC14Q08ET2 396 aa17.72■□□□□ 0.43
CHCHD3-204ENST00000457942 COASYQ13057 564 aa17.72■□□□□ 0.43
CHCHD3-204ENST00000457942 MTERF2Q49AM1 385 aa17.72■□□□□ 0.43
CHCHD3-204ENST00000457942 SLC24A5Q71RS6 500 aa17.72■□□□□ 0.43
CHCHD3-204ENST00000457942 ZBTB33Q86T24 672 aa17.72■□□□□ 0.43
CHCHD3-204ENST00000457942 RDM1Q8NG50 284 aa17.72■□□□□ 0.43
CHCHD3-204ENST00000457942 MICAL1Q8TDZ2 1067 aa17.72■□□□□ 0.43
CHCHD3-204ENST00000457942 P2RX5Q93086 422 aa17.72■□□□□ 0.43
CHCHD3-204ENST00000457942 ATP6V0A4Q9HBG4 840 aa17.72■□□□□ 0.43
CHCHD3-204ENST00000457942 RGS18Q9NS28 235 aa17.72■□□□□ 0.43
CHCHD3-204ENST00000457942 HCSTQ9UBK5 93 aa17.72■□□□□ 0.43
CHCHD3-204ENST00000457942 MARCH6O60337 910 aa17.71■□□□□ 0.43
CHCHD3-204ENST00000457942 PSMD10O75832 226 aa17.71■□□□□ 0.43
CHCHD3-204ENST00000457942 ZSCAN20P17040 1043 aaPredicted RBP17.71■□□□□ 0.43
CHCHD3-204ENST00000457942 ANKRD1Q15327 319 aa17.71■□□□□ 0.43
CHCHD3-204ENST00000457942 FAM43BQ6ZT52 329 aaPredicted RBP17.71■□□□□ 0.43
CHCHD3-204ENST00000457942 CRIPAKQ8N1N5 446 aa17.71■□□□□ 0.43
CHCHD3-204ENST00000457942 VN1R2Q8NFZ6 395 aa17.71■□□□□ 0.43
CHCHD3-204ENST00000457942 NLRP7Q8WX94 980 aa17.71■□□□□ 0.43
CHCHD3-204ENST00000457942 ASIC4Q96FT7 647 aa17.71■□□□□ 0.43
CHCHD3-204ENST00000457942 PRRX2Q99811 253 aa17.71■□□□□ 0.43
CHCHD3-204ENST00000457942 PHF7Q9BWX1 381 aaPredicted RBP17.71■□□□□ 0.43
CHCHD3-204ENST00000457942 TLE6Q9H808 572 aa17.71■□□□□ 0.43
CHCHD3-204ENST00000457942 AAASQ9NRG9 546 aa17.71■□□□□ 0.43
CHCHD3-204ENST00000457942 TPCN1Q9ULQ1 816 aa17.71■□□□□ 0.43
CHCHD3-204ENST00000457942 PCDHB12Q9Y5F1 795 aa17.71■□□□□ 0.43
CHCHD3-204ENST00000457942 STK36Q9NRP7 1315 aa17.71■□□□□ 0.42
CHCHD3-204ENST00000457942 CYP3A7-CYP3A51PA0A087WV96 503 aa17.7■□□□□ 0.42
CHCHD3-204ENST00000457942 M0R2N6 131 aa17.7■□□□□ 0.42
CHCHD3-204ENST00000457942 DTNBO60941 627 aa17.7■□□□□ 0.42
CHCHD3-204ENST00000457942 CYP3A7P24462 503 aa17.7■□□□□ 0.42
CHCHD3-204ENST00000457942 CBX2Q14781 532 aaPredicted RBP17.7■□□□□ 0.42
CHCHD3-204ENST00000457942 NAALADL2Q58DX5 795 aa17.7■□□□□ 0.42
CHCHD3-204ENST00000457942 XKR3Q5GH77 459 aa17.7■□□□□ 0.42
CHCHD3-204ENST00000457942 MOXD1Q6UVY6 613 aa17.7■□□□□ 0.42
CHCHD3-204ENST00000457942 TSHZ2Q9NRE2 1034 aa17.7■□□□□ 0.42
CHCHD3-204ENST00000457942 PLXNA3P51805 1871 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 C9IYK1 514 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 SLC37A4O43826 429 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 PFKFB2O60825 505 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 FGFR1P11362 822 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 AVPR2P30518 371 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 AK2P54819 239 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms