RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 FAM228AQ86W67 206 aa18.15■□□□□ 0.5
SMPD4-214ENST00000455548 ZNF579Q8NAF0 562 aaKnown RBP18.15■□□□□ 0.5
SMPD4-214ENST00000455548 SP7Q8TDD2 431 aaPredicted RBP18.15■□□□□ 0.5
SMPD4-214ENST00000455548 SNX21Q969T3 373 aa18.15■□□□□ 0.5
SMPD4-214ENST00000455548 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.15■□□□□ 0.5
SMPD4-214ENST00000455548 STK24Q9Y6E0 443 aa18.15■□□□□ 0.5
SMPD4-214ENST00000455548 COL4A6Q14031 1691 aa18.15■□□□□ 0.5
SMPD4-214ENST00000455548 DENND3A2RUS2 1198 aa18.14■□□□□ 0.49
SMPD4-214ENST00000455548 LINC01553A4QN01 128 aa18.14■□□□□ 0.49
SMPD4-214ENST00000455548 ZBTB39O15060 712 aa18.14■□□□□ 0.49
SMPD4-214ENST00000455548 ARHGEF15O94989 841 aa18.14■□□□□ 0.49
SMPD4-214ENST00000455548 STAG3L1P0CL83 205 aa18.14■□□□□ 0.49
SMPD4-214ENST00000455548 SPATA31C1P0DKV0 1188 aa18.14■□□□□ 0.49
SMPD4-214ENST00000455548 MUTP22033 750 aa18.14■□□□□ 0.49
SMPD4-214ENST00000455548 RPA1P27694 616 aa18.14■□□□□ 0.49
SMPD4-214ENST00000455548 EMC2Q15006 297 aa18.14■□□□□ 0.49
SMPD4-214ENST00000455548 HAUS3Q68CZ6 603 aa18.14■□□□□ 0.49
SMPD4-214ENST00000455548 RTN4RL1Q86UN2 441 aaPredicted RBP18.14■□□□□ 0.49
SMPD4-214ENST00000455548 RHPN2Q8IUC4 686 aa18.14■□□□□ 0.49
SMPD4-214ENST00000455548 NPAS4Q8IUM7 802 aa18.14■□□□□ 0.49
SMPD4-214ENST00000455548 TCP11Q8WWU5 503 aa18.14■□□□□ 0.49
SMPD4-214ENST00000455548 PSPC1Q8WXF1 523 aaKnown RBP18.14■□□□□ 0.49
SMPD4-214ENST00000455548 TGS1Q96RS0 853 aaKnown RBP18.14■□□□□ 0.49
SMPD4-214ENST00000455548 GCOM2Q9BZD3 368 aaPredicted RBP18.14■□□□□ 0.49
SMPD4-214ENST00000455548 INO80BQ9C086 356 aaPredicted RBP18.14■□□□□ 0.49
SMPD4-214ENST00000455548 TMX1Q9H3N1 280 aa18.14■□□□□ 0.49
SMPD4-214ENST00000455548 LRWD1Q9UFC0 647 aa18.14■□□□□ 0.49
SMPD4-214ENST00000455548 VPS37CA5D8V6 355 aaPredicted RBP18.13■□□□□ 0.49
SMPD4-214ENST00000455548 CATSPER3Q86XQ3 398 aa18.13■□□□□ 0.49
SMPD4-214ENST00000455548 IGSF22Q8N9C0 903 aa18.13■□□□□ 0.49
SMPD4-214ENST00000455548 ZNF668Q96K58 619 aaPredicted RBP18.13■□□□□ 0.49
SMPD4-214ENST00000455548 NACC1Q96RE7 527 aa18.13■□□□□ 0.49
SMPD4-214ENST00000455548 ADAM2Q99965 735 aa18.13■□□□□ 0.49
SMPD4-214ENST00000455548 C1orf112Q9NSG2 853 aa18.13■□□□□ 0.49
SMPD4-214ENST00000455548 COL4A3BPQ9Y5P4 624 aa18.13■□□□□ 0.49
SMPD4-214ENST00000455548 ASAP2O43150 1006 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 MGEA5O60502 916 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 MED24O75448 989 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 DGAT1O75907 488 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 SARSP49591 514 aaKnown RBP18.12■□□□□ 0.49
SMPD4-214ENST00000455548 RARRES1P49788 294 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 ERVK-21P61565 698 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 DTHD1Q6ZMT9 781 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 SLC24A5Q71RS6 500 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 MAFAQ8NHW3 353 aaPredicted RBP18.12■□□□□ 0.49
SMPD4-214ENST00000455548 PIGOQ8TEQ8 1089 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 ARNTL2Q8WYA1 636 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 TMEM143Q96AN5 459 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 SAMD11Q96NU1 681 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 MTRQ99707 1265 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 CERS4Q9HA82 394 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 RGS18Q9NS28 235 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 DBR1Q9UK59 544 aaKnown RBP18.12■□□□□ 0.49
SMPD4-214ENST00000455548 LRFN2Q9ULH4 789 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 NLRC5Q86WI3 1866 aa18.12■□□□□ 0.49
SMPD4-214ENST00000455548 A0A087WZ62 844 aa18.11■□□□□ 0.49
SMPD4-214ENST00000455548 ZSCAN20P17040 1043 aaPredicted RBP18.11■□□□□ 0.49
SMPD4-214ENST00000455548 SFPQP23246 707 aaKnown RBP eCLIP18.11■□□□□ 0.49
SMPD4-214ENST00000455548 CCT6AP40227 531 aaKnown RBP18.11■□□□□ 0.49
SMPD4-214ENST00000455548 ATP2C1P98194 919 aaPredicted RBP18.11■□□□□ 0.49
SMPD4-214ENST00000455548 DSC3Q14574 896 aa18.11■□□□□ 0.49
SMPD4-214ENST00000455548 HSCBQ8IWL3 235 aa18.11■□□□□ 0.49
SMPD4-214ENST00000455548 CRIPAKQ8N1N5 446 aa18.11■□□□□ 0.49
SMPD4-214ENST00000455548 PRPF31Q8WWY3 499 aaKnown RBP18.11■□□□□ 0.49
SMPD4-214ENST00000455548 NLRP4Q96MN2 994 aa18.11■□□□□ 0.49
SMPD4-214ENST00000455548 FDXACB1Q9BRP7 624 aaPredicted RBP18.11■□□□□ 0.49
SMPD4-214ENST00000455548 ATP6V0A4Q9HBG4 840 aa18.11■□□□□ 0.49
SMPD4-214ENST00000455548 BMP2KQ9NSY1 1161 aaPredicted RBP18.11■□□□□ 0.49
SMPD4-214ENST00000455548 RALGAPA2Q2PPJ7 1873 aa18.11■□□□□ 0.49
SMPD4-214ENST00000455548 ADGRA3Q8IWK6 1321 aa18.1■□□□□ 0.49
SMPD4-214ENST00000455548 C9IYK1 514 aa18.1■□□□□ 0.49
SMPD4-214ENST00000455548 DGKIO75912 1065 aa18.1■□□□□ 0.49
SMPD4-214ENST00000455548 BMP15O95972 392 aa18.1■□□□□ 0.49
SMPD4-214ENST00000455548 SYT1P21579 422 aa18.1■□□□□ 0.49
SMPD4-214ENST00000455548 IGFBP4P22692 258 aa18.1■□□□□ 0.49
SMPD4-214ENST00000455548 LAMTOR4Q0VGL1 99 aa18.1■□□□□ 0.49
SMPD4-214ENST00000455548 ADGRE1Q14246 886 aa18.1■□□□□ 0.49
SMPD4-214ENST00000455548 MXD4Q14582 209 aaPredicted RBP18.1■□□□□ 0.49
SMPD4-214ENST00000455548 ARL6IP4Q66PJ3 421 aaKnown RBP18.1■□□□□ 0.49
SMPD4-214ENST00000455548 POTEGQ6S5H5 508 aa18.1■□□□□ 0.49
SMPD4-214ENST00000455548 FIBCD1Q8N539 461 aa18.1■□□□□ 0.49
SMPD4-214ENST00000455548 ZNF689Q96CS4 500 aaPredicted RBP18.1■□□□□ 0.49
SMPD4-214ENST00000455548 RC3H2Q9HBD1 1191 aaKnown RBP18.1■□□□□ 0.49
SMPD4-214ENST00000455548 XPNPEP1Q9NQW7 623 aa18.1■□□□□ 0.49
SMPD4-214ENST00000455548 PCDHB7Q9Y5E2 793 aa18.1■□□□□ 0.49
SMPD4-214ENST00000455548 COL4A4P53420 1690 aaPredicted RBP18.09■□□□□ 0.49
SMPD4-214ENST00000455548 GTPBP6O43824 516 aaPredicted RBP18.09■□□□□ 0.49
SMPD4-214ENST00000455548 FAM189BP81408 668 aa18.09■□□□□ 0.49
SMPD4-214ENST00000455548 KRT79Q5XKE5 535 aa18.09■□□□□ 0.49
SMPD4-214ENST00000455548 SPRED2Q7Z698 418 aa18.09■□□□□ 0.49
SMPD4-214ENST00000455548 SRGAP1Q7Z6B7 1085 aa18.09■□□□□ 0.49
SMPD4-214ENST00000455548 FERMT3Q86UX7 667 aa18.09■□□□□ 0.49
SMPD4-214ENST00000455548 KSR1Q8IVT5 923 aa18.09■□□□□ 0.49
SMPD4-214ENST00000455548 MCPH1Q8NEM0 835 aa18.09■□□□□ 0.49
SMPD4-214ENST00000455548 FBXO22Q8NEZ5 403 aa18.09■□□□□ 0.49
SMPD4-214ENST00000455548 SNX29Q8TEQ0 813 aa18.09■□□□□ 0.49
SMPD4-214ENST00000455548 IFT122Q9HBG6 1241 aa18.09■□□□□ 0.49
SMPD4-214ENST00000455548 CHST12Q9NRB3 414 aa18.09■□□□□ 0.49
SMPD4-214ENST00000455548 DACT1Q9NYF0 836 aa18.09■□□□□ 0.49
SMPD4-214ENST00000455548 MTUS1Q9ULD2 1270 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms