RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 SOCS4Q8WXH5 440 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 SUCLG2Q96I99 432 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 LBHD1Q9BQE6 289 aaPredicted RBP4.6□□□□□ -1.67
RBM39-220ENST00000455343 ASCC2Q9H1I8 757 aaPredicted RBP4.6□□□□□ -1.67
RBM39-220ENST00000455343 MRS2Q9HD23 443 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 USP40Q9NVE5 1235 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.6□□□□□ -1.67
RBM39-220ENST00000455343 LRRFIP2Q9Y608 721 aaKnown RBP4.6□□□□□ -1.67
RBM39-220ENST00000455343 GAKO14976 1311 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 SALL1Q9NSC2 1324 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.67
RBM39-220ENST00000455343 IFIT1P09914 478 aaKnown RBP4.59□□□□□ -1.67
RBM39-220ENST00000455343 NBPF7P0C2Y1 421 aaPredicted RBP4.59□□□□□ -1.67
RBM39-220ENST00000455343 FOSL2P15408 326 aa4.59□□□□□ -1.67
RBM39-220ENST00000455343 CCND3P30281 292 aaPredicted RBP4.59□□□□□ -1.67
RBM39-220ENST00000455343 SPP2Q13103 211 aa4.59□□□□□ -1.67
RBM39-220ENST00000455343 PABPC4Q13310 644 aaKnown RBP eCLIP4.59□□□□□ -1.67
RBM39-220ENST00000455343 IL16Q14005 1332 aa4.59□□□□□ -1.67
RBM39-220ENST00000455343 RRP1BQ14684 758 aaKnown RBP4.59□□□□□ -1.67
RBM39-220ENST00000455343 SNX17Q15036 470 aa4.59□□□□□ -1.67
RBM39-220ENST00000455343 PUM3Q15397 648 aaKnown RBP4.59□□□□□ -1.67
RBM39-220ENST00000455343 METTL24Q5JXM2 366 aa4.59□□□□□ -1.67
RBM39-220ENST00000455343 ANKRD44Q8N8A2 993 aa4.59□□□□□ -1.67
RBM39-220ENST00000455343 USP38Q8NB14 1042 aa4.59□□□□□ -1.67
RBM39-220ENST00000455343 FBXO27Q8NI29 283 aa4.59□□□□□ -1.67
RBM39-220ENST00000455343 VWCEQ96DN2 955 aa4.59□□□□□ -1.67
RBM39-220ENST00000455343 P2RX7Q99572 595 aaKnown RBP4.59□□□□□ -1.67
RBM39-220ENST00000455343 KIF2CQ99661 725 aa4.59□□□□□ -1.67
RBM39-220ENST00000455343 SENP6Q9GZR1 1112 aaPredicted RBP4.59□□□□□ -1.67
RBM39-220ENST00000455343 OSBPL5Q9H0X9 879 aaPredicted RBP4.59□□□□□ -1.67
RBM39-220ENST00000455343 SLC6A17Q9H1V8 727 aa4.59□□□□□ -1.67
RBM39-220ENST00000455343 CWC22Q9HCG8 908 aaKnown RBP4.59□□□□□ -1.67
RBM39-220ENST00000455343 TXNRD2Q9NNW7 524 aa4.59□□□□□ -1.67
RBM39-220ENST00000455343 DDX4Q9NQI0 724 aaKnown RBP4.59□□□□□ -1.67
RBM39-220ENST00000455343 RBPJLQ9UBG7 517 aa4.59□□□□□ -1.67
RBM39-220ENST00000455343 ALPK3Q96L96 1907 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 MINDY4BA8MYZ0 360 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 DNM1LO00429 736 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 PEX10O60683 326 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 HOXC6P09630 235 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 ZKSCAN1P17029 563 aaPredicted RBP4.58□□□□□ -1.68
RBM39-220ENST00000455343 MAPK4P31152 587 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 RFX5P48382 616 aaPredicted RBP4.58□□□□□ -1.68
RBM39-220ENST00000455343 HMGCS2P54868 508 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 RHBDL3P58872 404 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 CHRNEQ04844 493 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 DUSP4Q13115 394 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 CCL14Q16627 93 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 CLEC16AQ2KHT3 1053 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 ERMP1Q7Z2K6 904 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 ANKS4BQ8N8V4 417 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 GPRC5AQ8NFJ5 357 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 KLHDC4Q8TBB5 520 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 ATXN2LQ8WWM7 1075 aaKnown RBP4.58□□□□□ -1.68
RBM39-220ENST00000455343 LPIN2Q92539 896 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 LPAR1Q92633 364 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 FAM122AQ96E09 287 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 INTS4Q96HW7 963 aaKnown RBP4.58□□□□□ -1.68
RBM39-220ENST00000455343 G6PC3Q9BUM1 346 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 LRRC3Q9BY71 257 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 PORCNQ9H237 461 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 BICC1Q9H694 974 aaKnown RBP4.58□□□□□ -1.68
RBM39-220ENST00000455343 KBTBD4Q9NVX7 518 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 C9orf78Q9NZ63 289 aaPredicted RBP4.58□□□□□ -1.68
RBM39-220ENST00000455343 EBF1Q9UH73 591 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 DDX20Q9UHI6 824 aaKnown RBP4.58□□□□□ -1.68
RBM39-220ENST00000455343 SMG5Q9UPR3 1016 aaKnown RBP4.58□□□□□ -1.68
RBM39-220ENST00000455343 YBX2Q9Y2T7 364 aaKnown RBP4.58□□□□□ -1.68
RBM39-220ENST00000455343 ZNF281Q9Y2X9 895 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 CHD9Q3L8U1 2897 aa4.58□□□□□ -1.68
RBM39-220ENST00000455343 FANCIQ9NVI1 1328 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 MYH3P11055 1940 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 GPR75-ASB3A0A0A6YYF3 556 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 TRIM43BA6NCK2 446 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 EYA2O00167 538 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 RGS13O14921 159 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 TLR3O15455 904 aaKnown RBP4.57□□□□□ -1.68
RBM39-220ENST00000455343 MSCO60682 206 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 UBOX5O94941 541 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 PDIA4P13667 645 aaKnown RBP4.57□□□□□ -1.68
RBM39-220ENST00000455343 ITGB8P26012 769 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 GBP1P32455 592 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 RGS2P41220 211 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 BACE1P56817 501 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 RTP1P59025 263 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 LINC00310P59036 64 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 HERVK_113P62684 666 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 RNF4P78317 190 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 MAP3K12Q12852 859 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 NMIQ13287 307 aaPredicted RBP4.57□□□□□ -1.68
RBM39-220ENST00000455343 SLC39A5Q6ZMH5 540 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 ATG9AQ7Z3C6 839 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 GPR142Q7Z601 462 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 METTL16Q86W50 562 aaKnown RBP4.57□□□□□ -1.68
RBM39-220ENST00000455343 SPPL2CQ8IUH8 684 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 ENOX1Q8TC92 643 aaKnown RBP4.57□□□□□ -1.68
RBM39-220ENST00000455343 SYTL5Q8TDW5 730 aaPredicted RBP4.57□□□□□ -1.68
RBM39-220ENST00000455343 ZNF384Q8TF68 577 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 BADQ92934 168 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 KCNN1Q92952 543 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms