RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 LINC00116Q8NCU8 138 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 PARVGQ9HBI0 331 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 RPS6KA4O75676 772 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 MDH1P40925 334 aaKnown RBP8.32□□□□□ -1.08
RIF1-206ENST00000453091 RPS6KA2Q15349 733 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 PDZD8Q8NEN9 1154 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 ACSF2Q96CM8 615 aaPredicted RBP8.32□□□□□ -1.08
RIF1-206ENST00000453091 FAM213AQ9BRX8 229 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 ISCA1Q9BUE6 129 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 TSR3Q9UJK0 312 aaKnown RBP8.32□□□□□ -1.08
RIF1-206ENST00000453091 PNMA6FA0A0J9YX94 578 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 CFAP69A5D8W1 941 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 ZBBXA8MT70 800 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 DIAPH2O60879 1101 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 RNF8O76064 485 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 SOX11P35716 441 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 CCDC93Q567U6 631 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 C4orf33Q8N1A6 199 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 ZNF579Q8NAF0 562 aaKnown RBP8.32□□□□□ -1.08
RIF1-206ENST00000453091 ZNF564Q8TBZ8 553 aaPredicted RBP8.32□□□□□ -1.08
RIF1-206ENST00000453091 PHF20Q9BVI0 1012 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 CNOT10Q9H9A5 744 aaKnown RBP8.32□□□□□ -1.08
RIF1-206ENST00000453091 LCMT1Q9UIC8 334 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 HABP4Q5JVS0 413 aaKnown RBP8.32□□□□□ -1.08
RIF1-206ENST00000453091 C4orf50Q6ZRC1 276 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 ZBED8Q8IZ13 594 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 ADSSL1Q8N142 457 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 STK24Q9Y6E0 443 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 PPP1R3GB7ZBB8 358 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 MYBP10242 640 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 NUMBP49757 651 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 LRRC63Q05C16 580 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 C6orf118Q5T5N4 469 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 ARL6IP4Q66PJ3 421 aaKnown RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 PYROXD1Q8WU10 500 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 DEPDC1BQ8WUY9 529 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 FAF2Q96CS3 445 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 FAM161BQ96MY7 647 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 BRIP1Q9BX63 1249 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 TAF1DQ9H5J8 278 aaPredicted RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 COL15A1P39059 1388 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 WTIPA6NIX2 430 aaPredicted RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 SEMA3EO15041 775 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 CYP26A1O43174 497 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 RXRBP28702 533 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 SYT2Q8N9I0 419 aaPredicted RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 NCOA3Q9Y6Q9 1424 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 CCDC78A2IDD5 438 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 PPP1R12AO14974 1030 aaPredicted RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 CHUKO15111 745 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 EVI5O60447 810 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 LUC7L3O95232 432 aaKnown RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 GAP43P17677 238 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 ATP2C1P98194 919 aaPredicted RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 PPP6R3Q5H9R7 873 aaPredicted RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 BBOF1Q8ND07 529 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 CEP70Q8NHQ1 597 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 ATXN7L3BQ96GX2 97 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 CFAP57Q96MR6 1250 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 RUNDC3BQ96NL0 473 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 FUT8Q9BYC5 575 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 NACA2Q9H009 215 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 FAM49AQ9H0Q0 323 aaPredicted RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 PRDM4Q9UKN5 801 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 STK36Q9NRP7 1315 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 CUL1Q13616 776 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 MAP7Q14244 749 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 MYLK4Q86YV6 388 aaPredicted RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 ZBTB8OSQ8IWT0 167 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 C9orf72Q96LT7 481 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 SCOCQ9UIL1 159 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 ZNF18P17022 549 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 KCNJ1P48048 391 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 TMPRSS15P98073 1019 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 GRM4Q14833 912 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 TMEM259Q4ZIN3 620 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 C2CD6Q53TS8 623 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 CHMP6Q96FZ7 201 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 BTBD6Q96KE9 485 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 HEXIM2Q96MH2 286 aaKnown RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 TSC22D3Q99576 134 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.31□□□□□ -1.086e-7■■■□□ 16.7
RIF1-206ENST00000453091 ARHGEF40Q8TER5 1519 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 MYMKA6NI61 221 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 A6NJR5 290 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 TCP11X1B4DZS4 312 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 ADCY2Q08462 1091 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 PDIA2Q13087 525 aaKnown RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 CYFIP1Q7L576 1253 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 EPM2AIP1Q7L775 607 aaPredicted RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 ATP2A3Q93084 1043 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 CCT8L2Q96SF2 557 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 ALDH8A1Q9H2A2 487 aaPredicted RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 TXLNGQ9NUQ3 528 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 TRPM1Q7Z4N2 1603 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 ERVV-1B6SEH8 477 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 EIF3HO15372 352 aaKnown RBP eCLIP8.31□□□□□ -1.082e-6■■■□□ 15.4
RIF1-206ENST00000453091 DNAJC6O75061 913 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 SKAP2O75563 359 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms