RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 ZBTB12Q9Y330 459 aaPredicted RBP17.32■□□□□ 0.36
CNOT3-204ENST00000447684 A0A1B0GVG6 124 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 RFC5P40937 340 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 PLS1Q14651 629 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 RNF220Q5VTB9 566 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 INTS8Q75QN2 995 aaKnown RBP17.31■□□□□ 0.36
CNOT3-204ENST00000447684 ASRGL1Q7L266 308 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 TBC1D16Q8TBP0 767 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 RAD54LQ92698 747 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 TGS1Q96RS0 853 aaKnown RBP17.31■□□□□ 0.36
CNOT3-204ENST00000447684 PYGLP06737 847 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 RBM5P52756 815 aaKnown RBP eCLIP17.31■□□□□ 0.36
CNOT3-204ENST00000447684 MRPS35P82673 323 aaKnown RBP17.31■□□□□ 0.36
CNOT3-204ENST00000447684 PDCD2Q16342 344 aaPredicted RBP17.31■□□□□ 0.36
CNOT3-204ENST00000447684 TMEM266Q2M3C6 531 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 SLC35G1Q2M3R5 365 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 KRT25Q7Z3Z0 450 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 RNPEPL1Q9HAU8 725 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 TMEM260Q9NX78 707 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 STK17AQ9UEE5 414 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 ASAP1Q9ULH1 1129 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 STXBP5LQ9Y2K9 1186 aa17.31■□□□□ 0.36
CNOT3-204ENST00000447684 USP17L3A6NCW0 530 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 USP17L4A6NCW7 530 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 KIAA0391O15091 583 aaKnown RBP17.3■□□□□ 0.36
CNOT3-204ENST00000447684 TARSP26639 723 aaKnown RBP17.3■□□□□ 0.36
CNOT3-204ENST00000447684 STX2P32856 288 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 RANBP1P43487 201 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 RPL21P46778 160 aaKnown RBP17.3■□□□□ 0.36
CNOT3-204ENST00000447684 GALCP54803 685 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 MUM1Q2TAK8 710 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 DCAF12L1Q5VU92 463 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 KRT79Q5XKE5 535 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 GJB7Q6PEY0 223 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 USP17L1Q7RTZ2 530 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 GJA10Q969M2 543 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 HES6Q96HZ4 224 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 MARCH6O60337 910 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 IL2RBP14784 551 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 CALB2P22676 271 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 IGHMBP2P38935 993 aaKnown RBP17.3■□□□□ 0.36
CNOT3-204ENST00000447684 KLC1Q07866 573 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 LLGL1Q15334 1064 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 HERC4Q5GLZ8 1057 aaPredicted RBP17.3■□□□□ 0.36
CNOT3-204ENST00000447684 SPTY2D1Q68D10 685 aaPredicted RBP17.3■□□□□ 0.36
CNOT3-204ENST00000447684 ZNF449Q6P9G9 518 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 SEPT14Q6ZU15 432 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 RPUSD2Q8IZ73 545 aaKnown RBP17.3■□□□□ 0.36
CNOT3-204ENST00000447684 RBM46Q8TBY0 533 aaKnown RBP17.3■□□□□ 0.36
CNOT3-204ENST00000447684 UTP4Q969X6 686 aaKnown RBP17.3■□□□□ 0.36
CNOT3-204ENST00000447684 DNAJC17Q9NVM6 304 aaKnown RBP17.3■□□□□ 0.36
CNOT3-204ENST00000447684 CTNNAL1Q9UBT7 734 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 HDAC9Q9UKV0 1011 aa17.3■□□□□ 0.36
CNOT3-204ENST00000447684 G3BP2Q9UN86 482 aaKnown RBP17.3■□□□□ 0.36
CNOT3-204ENST00000447684 NPHP3-ACAD11A0A0J9YXS1 232 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 RIPK2O43353 540 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 GFPT2O94808 682 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 MAPK7Q13164 816 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 TNIP1Q15025 636 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 EXOC3L4Q17RC7 722 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 SPDYCQ5MJ68 293 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 GALNT17Q6IS24 598 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 MARCH10Q8NA82 808 aaPredicted RBP17.29■□□□□ 0.36
CNOT3-204ENST00000447684 PIGOQ8TEQ8 1089 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 MOV10L1Q9BXT6 1211 aaKnown RBP17.29■□□□□ 0.36
CNOT3-204ENST00000447684 ARPP21Q9UBL0 812 aaPredicted RBP17.29■□□□□ 0.36
CNOT3-204ENST00000447684 MAD2L2Q9UI95 211 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 HAO1Q9UJM8 370 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 SLIT2O94813 1529 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 LAMB1P07942 1786 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 TMEM110-MUSTN1A8MSY1 372 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 UNC5CO95185 931 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 TSNAXIP1Q2TAA8 658 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 ZCWPW2Q504Y3 356 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 SLC35G2Q8TBE7 412 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 MCM9Q9NXL9 1143 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 ARMCX3Q9UH62 379 aaPredicted RBP17.29■□□□□ 0.36
CNOT3-204ENST00000447684 TBK1Q9UHD2 729 aa17.29■□□□□ 0.36
CNOT3-204ENST00000447684 BZW2Q9Y6E2 419 aaKnown RBP17.29■□□□□ 0.36
CNOT3-204ENST00000447684 ATP6V1C1P21283 382 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 NR2F2P24468 414 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 CCNG1P51959 295 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 MGAT5Q09328 741 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 DIXDC1Q155Q3 683 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 SLFN11Q7Z7L1 901 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 GALNT15Q8N3T1 639 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 B4GALNT2Q8NHY0 566 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 ERP27Q96DN0 273 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 DCP1AQ9NPI6 582 aaPredicted RBP17.28■□□□□ 0.36
CNOT3-204ENST00000447684 DDX3XO00571 662 aaKnown RBP eCLIP17.28■□□□□ 0.36
CNOT3-204ENST00000447684 CETN3O15182 167 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 GJB6O95452 261 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 TDP2O95551 362 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 GNA14O95837 355 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 GNAZP19086 355 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 ALDH3A1P30838 453 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 CHRNDQ07001 517 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 ECHDC2Q86YB7 292 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 STK32AQ8WU08 396 aa17.28■□□□□ 0.36
CNOT3-204ENST00000447684 DYNLL2Q96FJ2 89 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms