RNA–Protein interactions for RNA: ENST00000447368.6

UBP1-204, Transcript of upstream binding protein 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBP1, Length 3,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-204ENST00000447368 BCAS3Q9H6U6 928 aa13.74□□□□□ -0.21
UBP1-204ENST00000447368 GDF3Q9NR23 364 aa13.74□□□□□ -0.21
UBP1-204ENST00000447368 DOCK2Q92608 1830 aa13.73□□□□□ -0.21
UBP1-204ENST00000447368 ADCY1Q08828 1119 aa13.73□□□□□ -0.21
UBP1-204ENST00000447368 KCNA1Q09470 495 aa13.73□□□□□ -0.21
UBP1-204ENST00000447368 CTTNQ14247 550 aaKnown RBP13.73□□□□□ -0.21
UBP1-204ENST00000447368 KNOP1Q1ED39 458 aaKnown RBP13.73□□□□□ -0.21
UBP1-204ENST00000447368 ASTE1Q2TB18 679 aaPredicted RBP13.73□□□□□ -0.21
UBP1-204ENST00000447368 NBPF9Q3BBW0 867 aa13.73□□□□□ -0.21
UBP1-204ENST00000447368 SLFN13Q68D06 897 aa13.73□□□□□ -0.21
UBP1-204ENST00000447368 ZNF513Q8N8E2 541 aaPredicted RBP13.73□□□□□ -0.21
UBP1-204ENST00000447368 MYH14Q7Z406 1995 aaKnown RBP13.73□□□□□ -0.21
UBP1-204ENST00000447368 BCORQ6W2J9 1755 aa13.73□□□□□ -0.21
UBP1-204ENST00000447368 PPP1R11O60927 126 aaPredicted RBP13.73□□□□□ -0.21
UBP1-204ENST00000447368 NR3C1P04150 777 aa13.73□□□□□ -0.21
UBP1-204ENST00000447368 ATP2B4P23634 1241 aa13.73□□□□□ -0.21
UBP1-204ENST00000447368 TM4SF1P30408 202 aa13.73□□□□□ -0.21
UBP1-204ENST00000447368 TMEM119Q4V9L6 283 aa13.73□□□□□ -0.21
UBP1-204ENST00000447368 INPP4AQ96PE3 977 aaPredicted RBP13.73□□□□□ -0.21
UBP1-204ENST00000447368 PICK1Q9NRD5 415 aa13.73□□□□□ -0.21
UBP1-204ENST00000447368 DDX39AO00148 427 aaKnown RBP13.72□□□□□ -0.21
UBP1-204ENST00000447368 TRIM37O94972 964 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 GDF11O95390 407 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 LCA5LO95447 670 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 KIAA0825Q8IV33 1275 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 PBKQ96KB5 322 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 OSGEPQ9NPF4 335 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 ANKRD36CQ5JPF3 1778 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 CFBP00751 764 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 PYGLP06737 847 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 TRIM49P0CI25 452 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 TRIM49CP0CI26 452 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 CTCFP49711 727 aaPredicted RBP13.72□□□□□ -0.21
UBP1-204ENST00000447368 ARHGAP4P98171 946 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 SEPT2Q15019 361 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 GPATCH4Q5T3I0 446 aaKnown RBP13.72□□□□□ -0.21
UBP1-204ENST00000447368 HS2ST1Q7LGA3 356 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 CATSPER3Q86XQ3 398 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.72□□□□□ -0.213e-8■□□□□ 10.1
UBP1-204ENST00000447368 CTTNBP2NLQ9P2B4 639 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 A8MUI8 341 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 AKAP3O75969 853 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 FLT3P36888 993 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 USP11P51784 963 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 RHBDL3P58872 404 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 HOOK2Q96ED9 719 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 C15orf41Q9Y2V0 281 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 SNX24Q9Y343 169 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 ABCB11O95342 1321 aa13.72□□□□□ -0.21
UBP1-204ENST00000447368 DCDC2CA8MYV0 355 aa13.71□□□□□ -0.21
UBP1-204ENST00000447368 hCG_1984214I3L0E3 225 aa13.71□□□□□ -0.21
UBP1-204ENST00000447368 PON1P27169 355 aa13.71□□□□□ -0.21
UBP1-204ENST00000447368 NMT1P30419 496 aaKnown RBP13.71□□□□□ -0.21
UBP1-204ENST00000447368 GALCP54803 685 aa13.71□□□□□ -0.21
UBP1-204ENST00000447368 SHROOM1Q2M3G4 852 aaPredicted RBP13.71□□□□□ -0.21
UBP1-204ENST00000447368 ZC2HC1CQ53FD0 456 aaPredicted RBP13.71□□□□□ -0.21
UBP1-204ENST00000447368 PPP4R3AQ6IN85 833 aa13.71□□□□□ -0.21
UBP1-204ENST00000447368 FAM186BQ8IYM0 893 aa13.71□□□□□ -0.21
UBP1-204ENST00000447368 ZNF713Q8N859 430 aaPredicted RBP13.71□□□□□ -0.21
UBP1-204ENST00000447368 DDX4Q9NQI0 724 aaKnown RBP13.71□□□□□ -0.21
UBP1-204ENST00000447368 TMOD4Q9NZQ9 345 aa13.71□□□□□ -0.21
UBP1-204ENST00000447368 ZBTB21Q9ULJ3 1066 aa13.71□□□□□ -0.21
UBP1-204ENST00000447368 RABGAP1Q9Y3P9 1069 aa13.71□□□□□ -0.21
UBP1-204ENST00000447368 PCDHGC5Q9Y5F6 944 aa13.71□□□□□ -0.21
UBP1-204ENST00000447368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.71□□□□□ -0.21
UBP1-204ENST00000447368 LACTBP83111 547 aaPredicted RBP13.71□□□□□ -0.21
UBP1-204ENST00000447368 ORC2Q13416 577 aaPredicted RBP13.71□□□□□ -0.21
UBP1-204ENST00000447368 CHADLQ6NUI6 762 aa13.71□□□□□ -0.21
UBP1-204ENST00000447368 RUBCNQ92622 972 aa13.71□□□□□ -0.21
UBP1-204ENST00000447368 RBM17Q96I25 401 aaKnown RBP13.71□□□□□ -0.21
UBP1-204ENST00000447368 ISCUQ9H1K1 167 aa13.71□□□□□ -0.21
UBP1-204ENST00000447368 BZW2Q9Y6E2 419 aaKnown RBP13.71□□□□□ -0.21
UBP1-204ENST00000447368 hCG_2014768A0A024R1R8 64 aa13.71□□□□□ -0.22
UBP1-204ENST00000447368 LRRD1A4D1F6 860 aa13.71□□□□□ -0.22
UBP1-204ENST00000447368 RTN2O75298 545 aa13.71□□□□□ -0.22
UBP1-204ENST00000447368 KCNJ2P63252 427 aa13.71□□□□□ -0.22
UBP1-204ENST00000447368 LRRC14Q15048 493 aa13.71□□□□□ -0.22
UBP1-204ENST00000447368 GLG1Q92896 1179 aa13.71□□□□□ -0.22
UBP1-204ENST00000447368 PAIP2Q9BPZ3 127 aaKnown RBP13.71□□□□□ -0.22
UBP1-204ENST00000447368 PNMA2Q9UL42 364 aa13.71□□□□□ -0.22
UBP1-204ENST00000447368 PTPN22Q9Y2R2 807 aa13.71□□□□□ -0.22
UBP1-204ENST00000447368 EXOC3O60645 756 aa13.7□□□□□ -0.22
UBP1-204ENST00000447368 PPP2R2AP63151 447 aa13.7□□□□□ -0.22
UBP1-204ENST00000447368 CUL1Q13616 776 aa13.7□□□□□ -0.22
UBP1-204ENST00000447368 ZYXQ15942 572 aaKnown RBP13.7□□□□□ -0.22
UBP1-204ENST00000447368 ZCWPW2Q504Y3 356 aa13.7□□□□□ -0.22
UBP1-204ENST00000447368 SLFN12Q8IYM2 578 aa13.7□□□□□ -0.22
UBP1-204ENST00000447368 SYCE1Q8N0S2 351 aa13.7□□□□□ -0.22
UBP1-204ENST00000447368 TPCN2Q8NHX9 752 aa13.7□□□□□ -0.22
UBP1-204ENST00000447368 CYP2W1Q8TAV3 490 aa13.7□□□□□ -0.22
UBP1-204ENST00000447368 SYN2Q92777 582 aaPredicted RBP13.7□□□□□ -0.22
UBP1-204ENST00000447368 FMO2Q99518 471 aa13.7□□□□□ -0.22
UBP1-204ENST00000447368 TRIM4Q9C037 500 aa13.7□□□□□ -0.22
UBP1-204ENST00000447368 POLLQ9UGP5 575 aa13.7□□□□□ -0.22
UBP1-204ENST00000447368 PLCH1Q4KWH8 1693 aa13.7□□□□□ -0.22
UBP1-204ENST00000447368 EEF2P13639 858 aaKnown RBP13.7□□□□□ -0.22
UBP1-204ENST00000447368 ATP11AP98196 1134 aa13.7□□□□□ -0.22
UBP1-204ENST00000447368 GRIK3Q13003 919 aa13.7□□□□□ -0.22
UBP1-204ENST00000447368 CCDC38Q502W7 563 aa13.7□□□□□ -0.22
UBP1-204ENST00000447368 ZNF746Q6NUN9 644 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms