RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 SAMD3Q8N6K7 520 aa7.55□□□□□ -1.2
CDK12-202ENST00000447079 MAP3K20Q9NYL2 800 aaKnown RBP7.55□□□□□ -1.2
CDK12-202ENST00000447079 LGALS16A8MUM7 142 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 F5H6K3 240 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 KLRC3Q07444 240 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 KNOP1Q1ED39 458 aaKnown RBP7.54□□□□□ -1.2
CDK12-202ENST00000447079 BSPRYQ5W0U4 402 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 CATSPER4Q7RTX7 472 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 SPON1Q9HCB6 807 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 CYP26B1Q9NR63 512 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 GSTA1P08263 222 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 GSTA2P09210 222 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 PEX3P56589 373 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 IRX5P78411 483 aaPredicted RBP7.54□□□□□ -1.2
CDK12-202ENST00000447079 MXD4Q14582 209 aaPredicted RBP7.54□□□□□ -1.2
CDK12-202ENST00000447079 ZNF699Q32M78 642 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 LRRC8CQ8TDW0 803 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 SCYL1Q96KG9 808 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 CAMTA2O94983 1202 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 GGPS1O95749 300 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 RPLP2P05387 115 aaKnown RBP7.54□□□□□ -1.2
CDK12-202ENST00000447079 UBXN2AP68543 259 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 IRX1P78414 480 aaPredicted RBP7.54□□□□□ -1.2
CDK12-202ENST00000447079 DYNC1I2Q13409 638 aaKnown RBP7.54□□□□□ -1.2
CDK12-202ENST00000447079 KLC3Q6P597 504 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 C7orf31Q8N865 590 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 HEXIM2Q96MH2 286 aaKnown RBP7.54□□□□□ -1.2
CDK12-202ENST00000447079 TDRD3Q9H7E2 651 aaKnown RBP7.54□□□□□ -1.2
CDK12-202ENST00000447079 JPH1Q9HDC5 661 aaPredicted RBP7.54□□□□□ -1.2
CDK12-202ENST00000447079 SKIP12755 728 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 C16orf86Q6ZW13 317 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 CYB5R4Q7L1T6 521 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 FRMD5Q7Z6J6 570 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 FAM133AQ8N9E0 248 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 EDEM3Q9BZQ6 932 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 SPTLC3Q9NUV7 552 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 MEIS1O00470 390 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 SLC16A3O15427 465 aaKnown RBP7.54□□□□□ -1.2
CDK12-202ENST00000447079 SORBS3O60504 671 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 GPC3P51654 580 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 GUF1Q8N442 669 aaKnown RBP7.54□□□□□ -1.2
CDK12-202ENST00000447079 TBC1D16Q8TBP0 767 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 GDAP1L1Q96MZ0 367 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 FLT1P17948 1338 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 HUS1O60921 280 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 GFPT2O94808 682 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 MYL3P08590 195 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 GUCY2CP25092 1073 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 GUCY2FP51841 1108 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 DSTYKQ6XUX3 929 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 CLEC17AQ6ZS10 378 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 ERICH1Q86X53 443 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 MRRFQ96E11 262 aaKnown RBP7.54□□□□□ -1.2
CDK12-202ENST00000447079 ASNSD1Q9NWL6 643 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 CLIC2O15247 247 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 NR1H3Q13133 447 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 KRT31Q15323 416 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 E2F5Q15329 346 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 ZNF568Q3ZCX4 644 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 TBC1D10BQ4KMP7 808 aaPredicted RBP7.54□□□□□ -1.2
CDK12-202ENST00000447079 RSBN1LQ6PCB5 846 aaPredicted RBP7.54□□□□□ -1.2
CDK12-202ENST00000447079 TMEM35BQ8NCS4 154 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 ARMC2Q8NEN0 867 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 GCOM2Q9BZD3 368 aaPredicted RBP7.54□□□□□ -1.2
CDK12-202ENST00000447079 EPS15L1Q9UBC2 864 aa7.54□□□□□ -1.2
CDK12-202ENST00000447079 SPDYE16A6NNV3 312 aaPredicted RBP7.53□□□□□ -1.2
CDK12-202ENST00000447079 GUCY2DQ02846 1103 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 SNAPC2Q13487 334 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 COG2Q14746 738 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 SPDYE2Q495Y8 402 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 FBXO41Q8TF61 875 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 CCDC88AQ3V6T2 1871 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 NBPF26B4DH59 902 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 RWDD2BP57060 319 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 NBPF10Q6P3W6 841 aaKnown RBP7.53□□□□□ -1.2
CDK12-202ENST00000447079 FBXO38Q6PIJ6 1188 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 C11orf57Q6ZUT1 292 aaPredicted RBP7.53□□□□□ -1.2
CDK12-202ENST00000447079 ATG9AQ7Z3C6 839 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 NBPF15Q8N660 670 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 FAM149B1Q96BN6 582 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 ZNF560Q96MR9 790 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 PARK7Q99497 189 aaKnown RBP7.53□□□□□ -1.2
CDK12-202ENST00000447079 TEX13BQ9BXU2 312 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 RNF181Q9P0P0 153 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 TNS2Q63HR2 1409 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 SLC25A27O95847 323 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 AGBL3Q8NEM8 1001 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 CENPKQ9BS16 269 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.53□□□□□ -1.2
CDK12-202ENST00000447079 PCDHA10Q9Y5I2 948 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 MAD1L1Q9Y6D9 718 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 DENND3A2RUS2 1198 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 MFAP3LO75121 409 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 KRT7P08729 469 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 ZFXP17010 805 aaPredicted RBP7.53□□□□□ -1.2
CDK12-202ENST00000447079 COASYQ13057 564 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 DARS2Q6PI48 645 aaKnown RBP7.53□□□□□ -1.2
CDK12-202ENST00000447079 PPP1R2P1Q96PQ5 205 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 FMO2Q99518 471 aa7.53□□□□□ -1.2
CDK12-202ENST00000447079 DDX50Q9BQ39 737 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms