RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 KCND1Q9NSA2 647 aa16.05■□□□□ 0.16
LINC00299-202ENST00000442956 CPA4Q9UI42 421 aa16.05■□□□□ 0.16
LINC00299-202ENST00000442956 FAM184BQ9ULE4 1060 aa16.05■□□□□ 0.16
LINC00299-202ENST00000442956 EPB41P11171 864 aaKnown RBP16.04■□□□□ 0.16
LINC00299-202ENST00000442956 MAPK4P31152 587 aa16.04■□□□□ 0.16
LINC00299-202ENST00000442956 SMTNP53814 917 aa16.04■□□□□ 0.16
LINC00299-202ENST00000442956 GTF2BQ00403 316 aa16.04■□□□□ 0.16
LINC00299-202ENST00000442956 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.04■□□□□ 0.16
LINC00299-202ENST00000442956 PLEKHH3Q7Z736 793 aa16.04■□□□□ 0.16
LINC00299-202ENST00000442956 DPP9Q86TI2 863 aa16.04■□□□□ 0.16
LINC00299-202ENST00000442956 CCDC155Q8N6L0 562 aa16.04■□□□□ 0.16
LINC00299-202ENST00000442956 SLC17A8Q8NDX2 589 aa16.04■□□□□ 0.16
LINC00299-202ENST00000442956 BSNDQ8WZ55 320 aa16.04■□□□□ 0.16
LINC00299-202ENST00000442956 COPS5Q92905 334 aa16.04■□□□□ 0.16
LINC00299-202ENST00000442956 SPATA33Q96N06 139 aa16.04■□□□□ 0.16
LINC00299-202ENST00000442956 NAA15Q9BXJ9 866 aaKnown RBP16.04■□□□□ 0.16
LINC00299-202ENST00000442956 AZI2Q9H6S1 392 aa16.04■□□□□ 0.16
LINC00299-202ENST00000442956 C17orf75Q9HAS0 396 aa16.04■□□□□ 0.16
LINC00299-202ENST00000442956 POLGP54098 1239 aaPredicted RBP16.03■□□□□ 0.16
LINC00299-202ENST00000442956 ZNF467Q7Z7K2 595 aaPredicted RBP16.03■□□□□ 0.16
LINC00299-202ENST00000442956 TMEM161BQ8NDZ6 487 aa16.03■□□□□ 0.16
LINC00299-202ENST00000442956 C16orf45Q96MC5 204 aaPredicted RBP16.03■□□□□ 0.16
LINC00299-202ENST00000442956 KIFC3Q9BVG8 833 aa16.03■□□□□ 0.16
LINC00299-202ENST00000442956 NIFKQ9BYG3 293 aaKnown RBP16.03■□□□□ 0.16
LINC00299-202ENST00000442956 MMRN2Q9H8L6 949 aa16.03■□□□□ 0.16
LINC00299-202ENST00000442956 METTL14Q9HCE5 456 aaKnown RBP16.03■□□□□ 0.16
LINC00299-202ENST00000442956 PASKQ96RG2 1323 aa16.03■□□□□ 0.16
LINC00299-202ENST00000442956 FECHP22830 423 aa16.03■□□□□ 0.16
LINC00299-202ENST00000442956 CYP2J2P51589 502 aa16.03■□□□□ 0.16
LINC00299-202ENST00000442956 EMC2Q15006 297 aa16.03■□□□□ 0.16
LINC00299-202ENST00000442956 FIGNQ5HY92 759 aa16.03■□□□□ 0.16
LINC00299-202ENST00000442956 OR8K1Q8NGG5 319 aa16.03■□□□□ 0.16
LINC00299-202ENST00000442956 SPIRE2Q8WWL2 714 aa16.03■□□□□ 0.16
LINC00299-202ENST00000442956 GLG1Q92896 1179 aa16.03■□□□□ 0.16
LINC00299-202ENST00000442956 VTA1Q9NP79 307 aa16.03■□□□□ 0.16
LINC00299-202ENST00000442956 FAM207AQ9NSI2 230 aaPredicted RBP16.03■□□□□ 0.16
LINC00299-202ENST00000442956 NRBP2Q9NSY0 501 aa16.03■□□□□ 0.16
LINC00299-202ENST00000442956 DMAC2Q9NW81 257 aa16.03■□□□□ 0.16
LINC00299-202ENST00000442956 DIS3Q9Y2L1 958 aaKnown RBP16.03■□□□□ 0.16
LINC00299-202ENST00000442956 SOWAHDA6NJG2 315 aa16.02■□□□□ 0.16
LINC00299-202ENST00000442956 XRCC5P13010 732 aaKnown RBP16.02■□□□□ 0.16
LINC00299-202ENST00000442956 PSMC2P35998 433 aaKnown RBP16.02■□□□□ 0.16
LINC00299-202ENST00000442956 RTP1P59025 263 aa16.02■□□□□ 0.16
LINC00299-202ENST00000442956 KCNH2Q12809 1159 aa16.02■□□□□ 0.16
LINC00299-202ENST00000442956 TAF1CQ15572 869 aaPredicted RBP16.02■□□□□ 0.16
LINC00299-202ENST00000442956 TAPT1Q6NXT6 567 aa16.02■□□□□ 0.16
LINC00299-202ENST00000442956 TRIM50Q86XT4 487 aa16.02■□□□□ 0.16
LINC00299-202ENST00000442956 FAM186BQ8IYM0 893 aa16.02■□□□□ 0.16
LINC00299-202ENST00000442956 DNAJC7Q99615 494 aa16.02■□□□□ 0.16
LINC00299-202ENST00000442956 NTPCRQ9BSD7 190 aaKnown RBP16.02■□□□□ 0.16
LINC00299-202ENST00000442956 POLR3FQ9H1D9 316 aaPredicted RBP16.02■□□□□ 0.16
LINC00299-202ENST00000442956 ZCCHC17Q9NP64 241 aaKnown RBP16.02■□□□□ 0.16
LINC00299-202ENST00000442956 KMT5AQ9NQR1 393 aa16.02■□□□□ 0.16
LINC00299-202ENST00000442956 AGPAT5Q9NUQ2 364 aa16.02■□□□□ 0.16
LINC00299-202ENST00000442956 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.02■□□□□ 0.16
LINC00299-202ENST00000442956 ADGRA2Q96PE1 1338 aa16.02■□□□□ 0.16
LINC00299-202ENST00000442956 SLC10A3P09131 477 aa16.02■□□□□ 0.15
LINC00299-202ENST00000442956 PPP2R3AQ06190 1150 aa16.02■□□□□ 0.15
LINC00299-202ENST00000442956 MTF1Q14872 753 aa16.02■□□□□ 0.15
LINC00299-202ENST00000442956 DCAF17Q5H9S7 520 aaPredicted RBP16.02■□□□□ 0.15
LINC00299-202ENST00000442956 TOGARAM2Q6ZUX3 1019 aa16.02■□□□□ 0.15
LINC00299-202ENST00000442956 SLC9A9Q8IVB4 645 aa16.02■□□□□ 0.15
LINC00299-202ENST00000442956 SLC7A3Q8WY07 619 aa16.02■□□□□ 0.15
LINC00299-202ENST00000442956 IQCDQ96DY2 449 aa16.02■□□□□ 0.15
LINC00299-202ENST00000442956 PPP1R13BQ96KQ4 1090 aa16.02■□□□□ 0.15
LINC00299-202ENST00000442956 DHX33Q9H6R0 707 aaKnown RBP16.02■□□□□ 0.15
LINC00299-202ENST00000442956 TISP43B9A030 160 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 EPHB6O15197 1021 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 LGR5O75473 907 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 ECM2O94769 699 aaPredicted RBP16.01■□□□□ 0.15
LINC00299-202ENST00000442956 ZBED6P86452 979 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 TARBP2Q15633 366 aaKnown RBP16.01■□□□□ 0.15
LINC00299-202ENST00000442956 MAMDC4Q6UXC1 1216 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 TMEM143Q96AN5 459 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 BORCS6Q96GS4 357 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 MAML3Q96JK9 1138 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 IFT74Q96LB3 600 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 CEP89Q96ST8 783 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 MKNK1Q9BUB5 465 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 TBX20Q9UMR3 447 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 FRMD4BQ9Y2L6 1034 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 TRPM7Q96QT4 1865 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 A0A1W2PQJ5 194 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 DENND3A2RUS2 1198 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 MARK3P27448 753 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 KCNMA1Q12791 1236 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 MYBPC2Q14324 1141 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 TSR1Q2NL82 804 aaKnown RBP16.01■□□□□ 0.15
LINC00299-202ENST00000442956 TCERG1LQ5VWI1 586 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 RAD9BQ6WBX8 426 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 TMTC1Q8IUR5 882 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 ZNF397Q8NF99 534 aaPredicted RBP16.01■□□□□ 0.15
LINC00299-202ENST00000442956 FAM167AQ96KS9 214 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 CRACR2AQ9BSW2 395 aa16.01■□□□□ 0.15
LINC00299-202ENST00000442956 ADGRA3Q8IWK6 1321 aa16■□□□□ 0.15
LINC00299-202ENST00000442956 ZNFX1Q9P2E3 1918 aaKnown RBP16■□□□□ 0.15
LINC00299-202ENST00000442956 SLC15A5A6NIM6 579 aa16■□□□□ 0.15
LINC00299-202ENST00000442956 EXOC3O60645 756 aa16■□□□□ 0.15
LINC00299-202ENST00000442956 SNAI1O95863 264 aaPredicted RBP16■□□□□ 0.15
LINC00299-202ENST00000442956 AFPP02771 609 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms