RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 KCNK18Q7Z418 384 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 RHPN2Q8IUC4 686 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 KCTD17Q8N5Z5 321 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 USP38Q8NB14 1042 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 RASSF8Q8NHQ8 419 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 KCNG4Q8TDN1 519 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 TCP11Q8WWU5 503 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 PRPF31Q8WWY3 499 aaKnown RBP13.72□□□□□ -0.21
USP1-203ENST00000442679 NLRP7Q8WX94 980 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 PSPC1Q8WXF1 523 aaKnown RBP13.72□□□□□ -0.21
USP1-203ENST00000442679 EPSTI1Q96J88 318 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 ZNF668Q96K58 619 aaPredicted RBP13.72□□□□□ -0.21
USP1-203ENST00000442679 SCLT1Q96NL6 688 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 OSMRQ99650 979 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 IFIH1Q9BYX4 1025 aaKnown RBP13.72□□□□□ -0.21
USP1-203ENST00000442679 MTIF3Q9H2K0 278 aaKnown RBP13.72□□□□□ -0.21
USP1-203ENST00000442679 SQORQ9Y6N5 450 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 KAT6AQ92794 2004 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 CD52P31358 61 aa13.71□□□□□ -0.21
USP1-203ENST00000442679 LAMTOR4Q0VGL1 99 aa13.71□□□□□ -0.21
USP1-203ENST00000442679 TMEM119Q4V9L6 283 aa13.71□□□□□ -0.21
USP1-203ENST00000442679 RASIP1Q5U651 963 aa13.71□□□□□ -0.21
USP1-203ENST00000442679 MAEAQ7L5Y9 396 aa13.71□□□□□ -0.21
USP1-203ENST00000442679 KSR1Q8IVT5 923 aa13.71□□□□□ -0.21
USP1-203ENST00000442679 SYMPKQ92797 1274 aaKnown RBP13.71□□□□□ -0.21
USP1-203ENST00000442679 APBB2Q92870 758 aa13.71□□□□□ -0.21
USP1-203ENST00000442679 CHAMP1Q96JM3 812 aa13.71□□□□□ -0.21
USP1-203ENST00000442679 CCSER1Q9C0I3 900 aa13.71□□□□□ -0.21
USP1-203ENST00000442679 AGO3Q9H9G7 860 aaKnown RBP13.71□□□□□ -0.21
USP1-203ENST00000442679 XPNPEP1Q9NQW7 623 aa13.71□□□□□ -0.21
USP1-203ENST00000442679 CXXC1Q9P0U4 656 aaPredicted RBP13.71□□□□□ -0.21
USP1-203ENST00000442679 RCOR1Q9UKL0 485 aa13.71□□□□□ -0.21
USP1-203ENST00000442679 NOC2LQ9Y3T9 749 aaKnown RBP13.71□□□□□ -0.21
USP1-203ENST00000442679 COL4A3BPQ9Y5P4 624 aa13.71□□□□□ -0.21
USP1-203ENST00000442679 WDR81Q562E7 1941 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 A0A087WZ62 844 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 ABHD14A-ACY1A0A1B0GW23 586 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 ASAP2O43150 1006 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 CUTAO60888 179 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 RPS6KA5O75582 802 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 BAIAP3O94812 1187 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 SSBP05455 408 aaKnown RBP eCLIP13.7□□□□□ -0.22
USP1-203ENST00000442679 SRGAP2CP0DJJ0 459 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 CYP11B2P19099 503 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 ARL2P36404 184 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 TXLNAP40222 546 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 ME1P48163 572 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 KRT85P78386 507 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 PAK2Q13177 524 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 KARSQ15046 597 aaKnown RBP13.7□□□□□ -0.22
USP1-203ENST00000442679 HABP4Q5JVS0 413 aaKnown RBP13.7□□□□□ -0.22
USP1-203ENST00000442679 FAM102BQ5T8I3 360 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 MCPH1Q8NEM0 835 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 TMEM40Q8WWA1 233 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 NLRP4Q96MN2 994 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 FDXACB1Q9BRP7 624 aaPredicted RBP13.7□□□□□ -0.22
USP1-203ENST00000442679 GCOM2Q9BZD3 368 aaPredicted RBP13.7□□□□□ -0.22
USP1-203ENST00000442679 POLR3FQ9H1D9 316 aaPredicted RBP13.7□□□□□ -0.22
USP1-203ENST00000442679 CCDC39Q9UFE4 941 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 PADI3Q9ULW8 664 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 RBM19Q9Y4C8 960 aaKnown RBP13.7□□□□□ -0.22
USP1-203ENST00000442679 SLC4A7Q9Y6M7 1214 aa13.7□□□□□ -0.22
USP1-203ENST00000442679 GPR182O15218 404 aa13.69□□□□□ -0.22
USP1-203ENST00000442679 EFCAB14O75071 495 aa13.69□□□□□ -0.22
USP1-203ENST00000442679 PLA2G4BP0C869 781 aa13.69□□□□□ -0.22
USP1-203ENST00000442679 DARSP14868 501 aaKnown RBP13.69□□□□□ -0.22
USP1-203ENST00000442679 PLCG1P19174 1290 aa13.69□□□□□ -0.22
USP1-203ENST00000442679 EIF4BP23588 611 aaKnown RBP13.69□□□□□ -0.22
USP1-203ENST00000442679 KCNJ6P48051 423 aa13.69□□□□□ -0.22
USP1-203ENST00000442679 NFX1Q12986 1120 aaKnown RBP13.69□□□□□ -0.22
USP1-203ENST00000442679 MXD4Q14582 209 aaPredicted RBP13.69□□□□□ -0.22
USP1-203ENST00000442679 ODR4Q5SWX8 454 aa13.69□□□□□ -0.22
USP1-203ENST00000442679 ZNF410Q86VK4 478 aa13.69□□□□□ -0.22
USP1-203ENST00000442679 LEO1Q8WVC0 666 aaPredicted RBP13.69□□□□□ -0.22
USP1-203ENST00000442679 SPATA32Q96LK8 384 aa13.69□□□□□ -0.22
USP1-203ENST00000442679 PANK2Q9BZ23 570 aa13.69□□□□□ -0.22
USP1-203ENST00000442679 GPRC5CQ9NQ84 441 aa13.69□□□□□ -0.22
USP1-203ENST00000442679 TSHZ2Q9NRE2 1034 aa13.69□□□□□ -0.22
USP1-203ENST00000442679 CIZ1Q9ULV3 898 aaPredicted RBP13.69□□□□□ -0.22
USP1-203ENST00000442679 PCDHA7Q9UN72 937 aa13.69□□□□□ -0.22
USP1-203ENST00000442679 ST3GAL5Q9UNP4 418 aa13.69□□□□□ -0.22
USP1-203ENST00000442679 TANC1Q9C0D5 1861 aa13.69□□□□□ -0.22
USP1-203ENST00000442679 SCN5AQ14524 2016 aa13.68□□□□□ -0.22
USP1-203ENST00000442679 CSDE1O75534 798 aaKnown RBP13.68□□□□□ -0.22
USP1-203ENST00000442679 WDR5P61964 334 aaKnown RBP13.68□□□□□ -0.22
USP1-203ENST00000442679 TFDP1Q14186 410 aa13.68□□□□□ -0.22
USP1-203ENST00000442679 LRIT3Q3SXY7 679 aa13.68□□□□□ -0.22
USP1-203ENST00000442679 AXDND1Q5T1B0 1012 aaPredicted RBP13.68□□□□□ -0.22
USP1-203ENST00000442679 RRAGBQ5VZM2 374 aa13.68□□□□□ -0.22
USP1-203ENST00000442679 RINT1Q6NUQ1 792 aa13.68□□□□□ -0.22
USP1-203ENST00000442679 C1orf186Q6ZWK4 172 aa13.68□□□□□ -0.22
USP1-203ENST00000442679 FAM228AQ86W67 206 aa13.68□□□□□ -0.22
USP1-203ENST00000442679 SYT2Q8N9I0 419 aaPredicted RBP13.68□□□□□ -0.22
USP1-203ENST00000442679 RNF149Q8NC42 400 aa13.68□□□□□ -0.22
USP1-203ENST00000442679 ASAP3Q8TDY4 903 aa13.68□□□□□ -0.22
USP1-203ENST00000442679 LRRC15Q8TF66 581 aa13.68□□□□□ -0.22
USP1-203ENST00000442679 RAD54LQ92698 747 aa13.68□□□□□ -0.22
USP1-203ENST00000442679 RUSC1Q9BVN2 902 aa13.68□□□□□ -0.22
USP1-203ENST00000442679 INO80BQ9C086 356 aaPredicted RBP13.68□□□□□ -0.22
USP1-203ENST00000442679 POLD4Q9HCU8 107 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms