RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 ARMCX3Q9UH62 379 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-218ENST00000442625 SKAP2O75563 359 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-218ENST00000442625 CLTAP09496 248 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 CDC25CP30307 473 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 SCNN1DP51172 638 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 SLC12A3P55017 1021 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 CYP4A11Q02928 519 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 ZRSR2Q15696 482 aaKnown RBP15.31■□□□□ 0.04
MCF2L-218ENST00000442625 PRR16Q569H4 304 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 RC3H1Q5TC82 1133 aaKnown RBP15.31■□□□□ 0.04
MCF2L-218ENST00000442625 PNMA8AQ86V59 439 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-218ENST00000442625 CATSPER3Q86XQ3 398 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 CHMP6Q96FZ7 201 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 FMO2Q99518 471 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 ELAC2Q9BQ52 826 aaKnown RBP15.31■□□□□ 0.04
MCF2L-218ENST00000442625 CCDC113Q9H0I3 377 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 DHX36Q9H2U1 1008 aaKnown RBP15.31■□□□□ 0.04
MCF2L-218ENST00000442625 EPB41L4BQ9H329 900 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 AZI2Q9H6S1 392 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 UTP11Q9Y3A2 253 aaKnown RBP15.31■□□□□ 0.04
MCF2L-218ENST00000442625 L3MBTL1Q9Y468 752 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 PCDHB13Q9Y5F0 798 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 CDK5RAP2Q96SN8 1893 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 IGKV6D-41A0A0C4DH26 115 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 MMEP08473 750 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 H2AFZP0C0S5 128 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 HYIQ5T013 277 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 WLSQ5T9L3 541 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 AGBL2Q5U5Z8 902 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 PRR5LQ6MZQ0 368 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 ARHGAP27Q6ZUM4 889 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 H2AFVQ71UI9 128 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 TBC1D1Q86TI0 1168 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-218ENST00000442625 KSR1Q8IVT5 923 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 LRRC34Q8IZ02 419 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 LNX1Q8TBB1 728 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-218ENST00000442625 P2RX7Q99572 595 aaKnown RBP15.3■□□□□ 0.04
MCF2L-218ENST00000442625 REEP2Q9BRK0 252 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 SEPT11Q9NVA2 429 aaKnown RBP15.3■□□□□ 0.04
MCF2L-218ENST00000442625 GGA2Q9UJY4 613 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 STXBP5LQ9Y2K9 1186 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 PCDHA1Q9Y5I3 950 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 GAKO14976 1311 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 C5orf60A6NFR6 353 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 AFPP02771 609 aaKnown RBP15.3■□□□□ 0.04
MCF2L-218ENST00000442625 ELF3P78545 371 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-218ENST00000442625 MSL1Q68DK7 614 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 FOXR2Q6PJQ5 311 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 RNF25Q96BH1 459 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-218ENST00000442625 PRMT1Q99873 361 aaKnown RBP15.3■□□□□ 0.04
MCF2L-218ENST00000442625 TAS2R14Q9NYV8 317 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 GCNT4Q9P109 453 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 SERPINB13Q9UIV8 391 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 ATF5Q9Y2D1 282 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-218ENST00000442625 CD2APQ9Y5K6 639 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 BHMG1C9JSJ3 638 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-218ENST00000442625 XRCC5P13010 732 aaKnown RBP15.3■□□□□ 0.04
MCF2L-218ENST00000442625 DRP2Q13474 957 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 GIT2Q14161 759 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 QRICH1Q2TAL8 776 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 ERMARDQ5T6L9 678 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 PALB2Q86YC2 1186 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 SLC35G2Q8TBE7 412 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 FBXO25Q8TCJ0 367 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 ARHGEF26Q96DR7 871 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 ANO3Q9BYT9 981 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 VEZTQ9HBM0 779 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 SIX2Q9NPC8 291 aa15.3■□□□□ 0.04
MCF2L-218ENST00000442625 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.3■□□□□ 0.047e-8■■■□□ 16
MCF2L-218ENST00000442625 TRIM37O94972 964 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 SHMT1P34896 483 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 EDRF1Q3B7T1 1238 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 TRAPPC3LQ5T215 181 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 RPAINQ86UA6 219 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 CCDC26Q8TAB7 109 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 TBC1D16Q8TBP0 767 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 STAMBPL1Q96FJ0 436 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 FAM163AQ96GL9 167 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-218ENST00000442625 ADAM7Q9H2U9 754 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 SUDS3Q9H7L9 328 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-218ENST00000442625 MLXIPLQ9NP71 852 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 FLOT1O75955 427 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 GCFC2P16383 781 aaKnown RBP15.29■□□□□ 0.04
MCF2L-218ENST00000442625 POU5F1Q01860 360 aaKnown RBP15.29■□□□□ 0.04
MCF2L-218ENST00000442625 MTMR3Q13615 1198 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 SLC29A2Q14542 456 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 LRRC14Q15048 493 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 KNOP1Q1ED39 458 aaKnown RBP15.29■□□□□ 0.04
MCF2L-218ENST00000442625 PPP1R18Q6NYC8 613 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 SDR16C5Q8N3Y7 309 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 MGARPQ8TDB4 240 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 EPS8L3Q8TE67 593 aaKnown RBP15.29■□□□□ 0.04
MCF2L-218ENST00000442625 C18orf8Q96DM3 657 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 KCNMB3Q9NPA1 279 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 ABCF3Q9NUQ8 709 aa15.29■□□□□ 0.04
MCF2L-218ENST00000442625 DBR1Q9UK59 544 aaKnown RBP15.29■□□□□ 0.04
MCF2L-218ENST00000442625 CCT8L1PA6NM43 557 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 TMEM110-MUSTN1A8MSY1 372 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 PPIP5K2O43314 1243 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 VIMP08670 466 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms