RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 UBA6A0AVT1 1052 aaPredicted RBP4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 FADS2P1A8MWK0 482 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 PRPF6O94906 941 aaKnown RBP4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 NTRK1P04629 796 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 F13BP05160 661 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 IL6STP40189 918 aaPredicted RBP4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 SLC16A1P53985 500 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 CYP27A1Q02318 531 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 BIRC3Q13489 604 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 C3orf36Q3SXR2 165 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 EMC4Q5J8M3 183 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 DUSP27Q5VZP5 1158 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 CCDC174Q6PII3 467 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 LMBR1LQ6UX01 489 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 TMPRSS7Q7RTY8 843 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 TXNRD3Q86VQ6 643 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 LZTR1Q8N653 840 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 MARCH10Q8NA82 808 aaPredicted RBP4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 CLEC4DQ8WXI8 215 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 FERMT2Q96AC1 680 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 HHIPL1Q96JK4 782 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 G6PC3Q9BUM1 346 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 SAGE1Q9NXZ1 904 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 EBF1Q9UH73 591 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 CDC23Q9UJX2 597 aa4.96□□□□□ -1.62
CDC42BPA-207ENST00000441725 CAPN8A6NHC0 703 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 CCER2I3L3R5 266 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 KPNA5O15131 536 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 TACR1P25103 407 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 MYBPC3Q14896 1274 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 MAPRE1Q15691 268 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 GPR155Q7Z3F1 870 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 SLCO6A1Q86UG4 719 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 CILP2Q8IUL8 1156 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 NLGN2Q8NFZ4 835 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 LRTOMTQ8WZ04 291 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 KIAA1191Q96A73 305 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 MAP6Q96JE9 813 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 GBP4Q96PP9 640 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 TUBGCP5Q96RT8 1024 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 NUP62CLQ9H1M0 184 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 MKNK2Q9HBH9 465 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 GPRC5BQ9NZH0 403 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 SETD1BQ9UPS6 1966 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 ACOT7O00154 380 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 ABCB4P21439 1286 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 CHKAP35790 457 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 GATA4P43694 442 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 BCAR1P56945 870 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 SLC9A5Q14940 896 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 ELF2Q15723 593 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 LDHAL6AQ6ZMR3 332 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 PLD6Q8N2A8 252 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 TEX19Q8NA77 164 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 NT5C1BQ96P26 610 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 SELENOOQ9BVL4 669 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 ACE2Q9BYF1 805 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 TMX4Q9H1E5 349 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 MYOTQ9UBF9 498 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 TNFRSF10DQ9UBN6 386 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 NUMBLQ9Y6R0 609 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 PITPNM2Q9BZ72 1349 aa4.95□□□□□ -1.62
CDC42BPA-207ENST00000441725 CFAP69A5D8W1 941 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 HGSO14964 777 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 MAFKO60675 156 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 TADA3O75528 432 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 PRLP01236 227 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 MSL3P1P0C860 447 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 TNFSF4P23510 183 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 SIM2Q14190 667 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 TTC38Q5R3I4 469 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 PRAMEF9Q5VWM5 478 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 MAEAQ7L5Y9 396 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 DAAM2Q86T65 1068 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 NRG4Q8WWG1 115 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 CCT6BQ92526 530 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 SSBP4Q9BWG4 385 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 WNT8AQ9H1J5 351 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 VPS11Q9H270 941 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 ARFGAP3Q9NP61 516 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 ASH2LQ9UBL3 628 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 ZNF69Q9UC07 566 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 CORO2BQ9UQ03 480 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 NR2E3Q9Y5X4 410 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 A0A1W2PQ45 241 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 A0A1W2PQY0 241 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 LRRC10BA6NIK2 292 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 RHPN2P1A8MT19 583 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 NCK2O43639 380 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 USP2O75604 605 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 PFKMP08237 780 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 CELA3BP08861 270 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 PPM1AP35813 382 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 CASP5P51878 434 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 CORO7P57737 925 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 BTKQ06187 659 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 MALLQ13021 153 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 ANO4Q32M45 955 aa4.94□□□□□ -1.62
CDC42BPA-207ENST00000441725 CYP4F22Q6NT55 531 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms