RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ARNTL2Q8WYA1 636 aa26.41■■□□□ 1.82
VARS-217ENST00000440048 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.41■■□□□ 1.82
VARS-217ENST00000440048 ANKEF1Q9NU02 776 aa26.41■■□□□ 1.82
VARS-217ENST00000440048 EPOPA6NHQ4 379 aa26.4■■□□□ 1.82
VARS-217ENST00000440048 RFXAPO00287 272 aa26.4■■□□□ 1.82
VARS-217ENST00000440048 DARSP14868 501 aaKnown RBP26.4■■□□□ 1.82
VARS-217ENST00000440048 CDC42EP1Q00587 391 aa26.4■■□□□ 1.82
VARS-217ENST00000440048 RILPL1Q5EBL4 403 aa26.4■■□□□ 1.82
VARS-217ENST00000440048 RHPN2Q8IUC4 686 aa26.4■■□□□ 1.82
VARS-217ENST00000440048 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.4■■□□□ 1.82
VARS-217ENST00000440048 TUFT1Q9NNX1 390 aa26.4■■□□□ 1.82
VARS-217ENST00000440048 BMP2KQ9NSY1 1161 aaPredicted RBP26.4■■□□□ 1.82
VARS-217ENST00000440048 A0A087WWV3 80 aa26.39■■□□□ 1.82
VARS-217ENST00000440048 K7ELQ4 463 aaPredicted RBP26.39■■□□□ 1.82
VARS-217ENST00000440048 MED24O75448 989 aa26.39■■□□□ 1.82
VARS-217ENST00000440048 FXR2P51116 673 aaKnown RBP eCLIP26.39■■□□□ 1.821e-12■■■■□ 21.3
VARS-217ENST00000440048 ERVK-21P61565 698 aa26.39■■□□□ 1.82
VARS-217ENST00000440048 CATSPER3Q86XQ3 398 aa26.39■■□□□ 1.82
VARS-217ENST00000440048 KSR1Q8IVT5 923 aa26.39■■□□□ 1.82
VARS-217ENST00000440048 CRIPAKQ8N1N5 446 aa26.39■■□□□ 1.82
VARS-217ENST00000440048 PIGOQ8TEQ8 1089 aa26.39■■□□□ 1.82
VARS-217ENST00000440048 TMEM143Q96AN5 459 aa26.39■■□□□ 1.82
VARS-217ENST00000440048 TGS1Q96RS0 853 aaKnown RBP26.39■■□□□ 1.82
VARS-217ENST00000440048 ADAM2Q99965 735 aa26.39■■□□□ 1.82
VARS-217ENST00000440048 POLR3CQ9BUI4 534 aaPredicted RBP26.39■■□□□ 1.82
VARS-217ENST00000440048 COL4A6Q14031 1691 aa26.38■■□□□ 1.81
VARS-217ENST00000440048 A0A087WZ62 844 aa26.38■■□□□ 1.81
VARS-217ENST00000440048 DENND3A2RUS2 1198 aa26.38■■□□□ 1.81
VARS-217ENST00000440048 EMC2Q15006 297 aa26.38■■□□□ 1.81
VARS-217ENST00000440048 NPAS4Q8IUM7 802 aa26.38■■□□□ 1.81
VARS-217ENST00000440048 ERMNQ8TAM6 284 aa26.38■■□□□ 1.81
VARS-217ENST00000440048 FDXACB1Q9BRP7 624 aaPredicted RBP26.38■■□□□ 1.81
VARS-217ENST00000440048 GCOM2Q9BZD3 368 aaPredicted RBP26.38■■□□□ 1.81
VARS-217ENST00000440048 RGS18Q9NS28 235 aa26.38■■□□□ 1.81
VARS-217ENST00000440048 LAD1O00515 517 aa26.37■■□□□ 1.81
VARS-217ENST00000440048 GAS2O43903 313 aaKnown RBP26.37■■□□□ 1.81
VARS-217ENST00000440048 XRCC6P12956 609 aaKnown RBP eCLIP26.37■■□□□ 1.81
VARS-217ENST00000440048 IGFBP4P22692 258 aa26.37■■□□□ 1.81
VARS-217ENST00000440048 RPA1P27694 616 aa26.37■■□□□ 1.81
VARS-217ENST00000440048 SARSP49591 514 aaKnown RBP26.37■■□□□ 1.81
VARS-217ENST00000440048 DSC3Q14574 896 aa26.37■■□□□ 1.81
VARS-217ENST00000440048 ZNF410Q86VK4 478 aa26.37■■□□□ 1.81
VARS-217ENST00000440048 INTS4Q96HW7 963 aaKnown RBP26.37■■□□□ 1.81
VARS-217ENST00000440048 RC3H2Q9HBD1 1191 aaKnown RBP26.37■■□□□ 1.81
VARS-217ENST00000440048 MTUS1Q9ULD2 1270 aa26.37■■□□□ 1.81
VARS-217ENST00000440048 COL4A3BPQ9Y5P4 624 aa26.37■■□□□ 1.81
VARS-217ENST00000440048 CSDE1O75534 798 aaKnown RBP26.36■■□□□ 1.81
VARS-217ENST00000440048 DGKIO75912 1065 aa26.36■■□□□ 1.81
VARS-217ENST00000440048 FGFR4P22455 802 aa26.36■■□□□ 1.81
VARS-217ENST00000440048 RARRES1P49788 294 aa26.36■■□□□ 1.81
VARS-217ENST00000440048 TCP11Q8WWU5 503 aa26.36■■□□□ 1.81
VARS-217ENST00000440048 PRPF31Q8WWY3 499 aaKnown RBP26.36■■□□□ 1.81
VARS-217ENST00000440048 PSPC1Q8WXF1 523 aaKnown RBP26.36■■□□□ 1.81
VARS-217ENST00000440048 SNX21Q969T3 373 aa26.36■■□□□ 1.81
VARS-217ENST00000440048 ZNF689Q96CS4 500 aaPredicted RBP26.36■■□□□ 1.81
VARS-217ENST00000440048 NLRP4Q96MN2 994 aa26.36■■□□□ 1.81
VARS-217ENST00000440048 CCDC43Q96MW1 224 aaKnown RBP26.36■■□□□ 1.81
VARS-217ENST00000440048 MTRQ99707 1265 aa26.36■■□□□ 1.81
VARS-217ENST00000440048 C17orf80Q9BSJ5 609 aa26.36■■□□□ 1.81
VARS-217ENST00000440048 XPNPEP1Q9NQW7 623 aa26.36■■□□□ 1.81
VARS-217ENST00000440048 C1orf112Q9NSG2 853 aa26.36■■□□□ 1.81
VARS-217ENST00000440048 LRWD1Q9UFC0 647 aa26.36■■□□□ 1.81
VARS-217ENST00000440048 NLRC5Q86WI3 1866 aa26.36■■□□□ 1.81
VARS-217ENST00000440048 COL4A4P53420 1690 aaPredicted RBP26.35■■□□□ 1.81
VARS-217ENST00000440048 VPS37CA5D8V6 355 aaPredicted RBP26.35■■□□□ 1.81
VARS-217ENST00000440048 C9IYK1 514 aa26.35■■□□□ 1.81
VARS-217ENST00000440048 STAG3L1P0CL83 205 aa26.35■■□□□ 1.81
VARS-217ENST00000440048 PDCP20941 246 aa26.35■■□□□ 1.81
VARS-217ENST00000440048 IBSPP21815 317 aaPredicted RBP26.35■■□□□ 1.81
VARS-217ENST00000440048 PRPHP41219 470 aa26.35■■□□□ 1.81
VARS-217ENST00000440048 PDIA5Q14554 519 aa26.35■■□□□ 1.81
VARS-217ENST00000440048 IL17AQ16552 155 aa26.35■■□□□ 1.81
VARS-217ENST00000440048 POTEGQ6S5H5 508 aa26.35■■□□□ 1.81
VARS-217ENST00000440048 SLC24A5Q71RS6 500 aa26.35■■□□□ 1.81
VARS-217ENST00000440048 IGSF22Q8N9C0 903 aa26.35■■□□□ 1.81
VARS-217ENST00000440048 NACC1Q96RE7 527 aa26.35■■□□□ 1.81
VARS-217ENST00000440048 FOXD4L1Q9NU39 408 aa26.35■■□□□ 1.81
VARS-217ENST00000440048 PRRC2BQ5JSZ5 2229 aaKnown RBP26.34■■□□□ 1.81
VARS-217ENST00000440048 DLL1O00548 723 aa26.34■■□□□ 1.81
VARS-217ENST00000440048 DGAT1O75907 488 aa26.34■■□□□ 1.81
VARS-217ENST00000440048 LAMTOR4Q0VGL1 99 aa26.34■■□□□ 1.81
VARS-217ENST00000440048 HAUS3Q68CZ6 603 aa26.34■■□□□ 1.81
VARS-217ENST00000440048 RAB34Q9BZG1 259 aa26.34■■□□□ 1.81
VARS-217ENST00000440048 ATP6V0A4Q9HBG4 840 aa26.34■■□□□ 1.81
VARS-217ENST00000440048 DBR1Q9UK59 544 aaKnown RBP26.34■■□□□ 1.81
VARS-217ENST00000440048 LRFN2Q9ULH4 789 aa26.34■■□□□ 1.81
VARS-217ENST00000440048 ADGRA3Q8IWK6 1321 aa26.34■■□□□ 1.81
VARS-217ENST00000440048 CCT6AP40227 531 aaKnown RBP26.33■■□□□ 1.81
VARS-217ENST00000440048 FAM189BP81408 668 aa26.33■■□□□ 1.81
VARS-217ENST00000440048 ATP2C1P98194 919 aaPredicted RBP26.33■■□□□ 1.81
VARS-217ENST00000440048 GRB10Q13322 594 aa26.33■■□□□ 1.81
VARS-217ENST00000440048 DTHD1Q6ZMT9 781 aa26.33■■□□□ 1.81
VARS-217ENST00000440048 BRAPQ7Z569 592 aa26.33■■□□□ 1.81
VARS-217ENST00000440048 FERMT3Q86UX7 667 aa26.33■■□□□ 1.81
VARS-217ENST00000440048 FIBCD1Q8N539 461 aa26.33■■□□□ 1.81
VARS-217ENST00000440048 INO80BQ9C086 356 aaPredicted RBP26.33■■□□□ 1.81
VARS-217ENST00000440048 IFT122Q9HBG6 1241 aa26.33■■□□□ 1.81
VARS-217ENST00000440048 PCDHB7Q9Y5E2 793 aa26.33■■□□□ 1.81
VARS-217ENST00000440048 RALGAPA2Q2PPJ7 1873 aa26.33■■□□□ 1.81
VARS-217ENST00000440048 REV3LO60673 3130 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms