RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 MRRFQ96E11 262 aaKnown RBP6.84□□□□□ -1.32
BDNF-211ENST00000439476 AGAP3Q96P47 875 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 FMO2Q99518 471 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 TEKT3Q9BXF9 490 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 SEZ6LQ9BYH1 1024 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 FGFR1OP2Q9NVK5 253 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 INTS13Q9NVM9 706 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 SMARCAL1Q9NZC9 954 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 IPO11Q9UI26 975 aaKnown RBP6.84□□□□□ -1.32
BDNF-211ENST00000439476 ZBTB21Q9ULJ3 1066 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 CDHR2Q9BYE9 1310 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 MGEA5O60502 916 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 FCER1AP12319 257 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 FAM133BQ5BKY9 247 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 DPP8Q6V1X1 898 aaPredicted RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 DPH6Q7L8W6 267 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 DGKHQ86XP1 1220 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 SRBD1Q8N5C6 995 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 EPN3Q9H201 632 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 TMEM206Q9H813 350 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 CACYBPQ9HB71 228 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 MRPL47Q9HD33 250 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 KLC4Q9NSK0 619 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 IP6K2Q9UHH9 426 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 PACSIN2Q9UNF0 486 aaPredicted RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 CD2APQ9Y5K6 639 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 IVNS1ABPQ9Y6Y0 642 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 PNPLA7Q6ZV29 1317 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 WDR17Q8IZU2 1322 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 KNDC1Q76NI1 1749 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 LINC00854A0A1B0GVQ3 168 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 USP17L3A6NCW0 530 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 USP17L4A6NCW7 530 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 STAM2O75886 525 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 ATP5HO75947 161 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 AFPP02771 609 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 VIL1P09327 827 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 POLR2MP0CAP2 368 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 TNNI1P19237 187 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 NSFP46459 744 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 SARSP49591 514 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 NR1H3Q13133 447 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 FAM83BQ5T0W9 1011 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 MAMSTRQ6ZN01 415 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 USP17L1Q7RTZ2 530 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 MMGT1Q8N4V1 131 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.83□□□□□ -1.32
BDNF-211ENST00000439476 GJA10Q969M2 543 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 DYNLL2Q96FJ2 89 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 MS4A14Q96JA4 679 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 PIGSQ96S52 555 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 CCT8L2Q96SF2 557 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 SH3GL1Q99961 368 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 RIOK1Q9BRS2 568 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 EFHD1Q9BUP0 239 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 TAF1DQ9H5J8 278 aaPredicted RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 CEP72Q9P209 647 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 ZNF219Q9P2Y4 722 aaPredicted RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 HESX1Q9UBX0 185 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 PAIP2BQ9ULR5 123 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 LEMD3Q9Y2U8 911 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 ERVV-1B6SEH8 477 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 MYO1FO00160 1098 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 SMIM24O75264 130 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 LMNAP02545 664 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 CYP2D6P10635 497 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 FOSL1P15407 271 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 LSP1P33241 339 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 MDH1P40925 334 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 MAGOHP61326 146 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 ZBTB17Q13105 803 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 DCAF15Q66K64 600 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 SRRM1Q8IYB3 904 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 LRRC47Q8N1G4 583 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 ZNF473Q8WTR7 871 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 PIGBQ92521 554 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 KLHL29Q96CT2 875 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 CLIP3Q96DZ5 547 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 CDHR1Q96JP9 859 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 NT5C1BQ96P26 610 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 ZIM3Q96PE6 472 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 EMILIN3Q9NT22 766 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 RBM12Q9NTZ6 932 aaKnown RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 C6orf203Q9P0P8 240 aaPredicted RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 CCNL1Q9UK58 526 aaPredicted RBP6.83□□□□□ -1.32
BDNF-211ENST00000439476 IFT172Q9UG01 1749 aa6.83□□□□□ -1.32
BDNF-211ENST00000439476 COL15A1P39059 1388 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 CPP00450 1065 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 ALOX15P16050 662 aaPredicted RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 BMP6P22004 513 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 RRM1P23921 792 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 PSMC2P35998 433 aaKnown RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 SLCO1A2P46721 670 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 CYP2J2P51589 502 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 PPP2R2AP63151 447 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 BFSP1Q12934 665 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 PABPC4Q13310 644 aaKnown RBP eCLIP6.82□□□□□ -1.32
BDNF-211ENST00000439476 PDIA5Q14554 519 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 SURF1Q15526 300 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 NT5DC1Q5TFE4 455 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms