RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 ITGB1P05556 798 aa17.7■□□□□ 0.42
NUP50-210ENST00000434760 KCNA5P22460 613 aa17.7■□□□□ 0.42
NUP50-210ENST00000434760 EIF4BP23588 611 aaKnown RBP17.7■□□□□ 0.42
NUP50-210ENST00000434760 DNAJB1P25685 340 aa17.7■□□□□ 0.42
NUP50-210ENST00000434760 KRT2P35908 639 aa17.7■□□□□ 0.42
NUP50-210ENST00000434760 FAM189BP81408 668 aa17.7■□□□□ 0.42
NUP50-210ENST00000434760 PLA2G4FQ68DD2 849 aa17.7■□□□□ 0.42
NUP50-210ENST00000434760 ZNF710Q8N1W2 664 aa17.7■□□□□ 0.42
NUP50-210ENST00000434760 NEK9Q8TD19 979 aa17.7■□□□□ 0.42
NUP50-210ENST00000434760 PABPC5Q96DU9 382 aaKnown RBP17.7■□□□□ 0.42
NUP50-210ENST00000434760 TMEM161AQ9NX61 479 aa17.7■□□□□ 0.42
NUP50-210ENST00000434760 CENPBP07199 599 aaPredicted RBP17.69■□□□□ 0.42
NUP50-210ENST00000434760 FGFR1P11362 822 aa17.69■□□□□ 0.42
NUP50-210ENST00000434760 PSMC5P62195 406 aa17.69■□□□□ 0.42
NUP50-210ENST00000434760 C8orf34Q49A92 452 aa17.69■□□□□ 0.42
NUP50-210ENST00000434760 FAM102BQ5T8I3 360 aa17.69■□□□□ 0.42
NUP50-210ENST00000434760 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.69■□□□□ 0.42
NUP50-210ENST00000434760 KIF2CQ99661 725 aa17.69■□□□□ 0.42
NUP50-210ENST00000434760 ELAC1Q9H777 363 aaKnown RBP17.69■□□□□ 0.42
NUP50-210ENST00000434760 ALG13Q9NP73 1137 aaKnown RBP17.69■□□□□ 0.42
NUP50-210ENST00000434760 LRFN2Q9ULH4 789 aa17.69■□□□□ 0.42
NUP50-210ENST00000434760 PLAGL2Q9UPG8 496 aa17.69■□□□□ 0.42
NUP50-210ENST00000434760 EIF5BO60841 1220 aaKnown RBP17.68■□□□□ 0.42
NUP50-210ENST00000434760 MAFO75444 373 aaPredicted RBP17.68■□□□□ 0.42
NUP50-210ENST00000434760 ATF7P17544 494 aaPredicted RBP17.68■□□□□ 0.42
NUP50-210ENST00000434760 IBSPP21815 317 aaPredicted RBP17.68■□□□□ 0.42
NUP50-210ENST00000434760 HYAL1Q12794 435 aa17.68■□□□□ 0.42
NUP50-210ENST00000434760 CTC1Q2NKJ3 1217 aa17.68■□□□□ 0.42
NUP50-210ENST00000434760 NAALADL2Q58DX5 795 aa17.68■□□□□ 0.42
NUP50-210ENST00000434760 KLHL23Q8NBE8 558 aa17.68■□□□□ 0.42
NUP50-210ENST00000434760 NAP1L4Q99733 375 aaKnown RBP17.68■□□□□ 0.42
NUP50-210ENST00000434760 LXNQ9BS40 222 aa17.68■□□□□ 0.42
NUP50-210ENST00000434760 PCDHB7Q9Y5E2 793 aa17.68■□□□□ 0.42
NUP50-210ENST00000434760 TBKBP1A7MCY6 615 aa17.67■□□□□ 0.42
NUP50-210ENST00000434760 TBX10O75333 385 aa17.67■□□□□ 0.42
NUP50-210ENST00000434760 FGFR4P22455 802 aa17.67■□□□□ 0.42
NUP50-210ENST00000434760 LTBRP36941 435 aa17.67■□□□□ 0.42
NUP50-210ENST00000434760 QARSP47897 775 aaKnown RBP17.67■□□□□ 0.42
NUP50-210ENST00000434760 ZNF598Q86UK7 904 aaKnown RBP17.67■□□□□ 0.42
NUP50-210ENST00000434760 DIS3L2Q8IYB7 885 aaKnown RBP17.67■□□□□ 0.42
NUP50-210ENST00000434760 ZNF579Q8NAF0 562 aaKnown RBP17.67■□□□□ 0.42
NUP50-210ENST00000434760 SPPL3Q8TCT6 385 aa17.67■□□□□ 0.42
NUP50-210ENST00000434760 CYP26B1Q9NR63 512 aa17.67■□□□□ 0.42
NUP50-210ENST00000434760 BTBD18B2RXH4 712 aa17.66■□□□□ 0.42
NUP50-210ENST00000434760 H3BQ06 376 aaPredicted RBP17.66■□□□□ 0.42
NUP50-210ENST00000434760 CSDE1O75534 798 aaKnown RBP17.66■□□□□ 0.42
NUP50-210ENST00000434760 CSPG5O95196 566 aa17.66■□□□□ 0.42
NUP50-210ENST00000434760 P4HBP07237 508 aaKnown RBP17.66■□□□□ 0.42
NUP50-210ENST00000434760 IL9P15248 144 aa17.66■□□□□ 0.42
NUP50-210ENST00000434760 GTF2F1P35269 517 aaKnown RBP eCLIP17.66■□□□□ 0.424e-6■■■■□ 25.2
NUP50-210ENST00000434760 IRS1P35568 1242 aa17.66■□□□□ 0.42
NUP50-210ENST00000434760 FOSBP53539 338 aa17.66■□□□□ 0.42
NUP50-210ENST00000434760 NPEPPSP55786 919 aa17.66■□□□□ 0.42
NUP50-210ENST00000434760 CLLU1OSQ5K130 101 aa17.66■□□□□ 0.42
NUP50-210ENST00000434760 ADGRD2Q7Z7M1 963 aa17.66■□□□□ 0.42
NUP50-210ENST00000434760 ZNF410Q86VK4 478 aa17.66■□□□□ 0.42
NUP50-210ENST00000434760 ECHDC2Q86YB7 292 aa17.66■□□□□ 0.42
NUP50-210ENST00000434760 NLRP7Q8WX94 980 aa17.66■□□□□ 0.42
NUP50-210ENST00000434760 DHX33Q9H6R0 707 aaKnown RBP17.66■□□□□ 0.42
NUP50-210ENST00000434760 CWH43Q9H720 699 aa17.66■□□□□ 0.42
NUP50-210ENST00000434760 BRMS1Q9HCU9 246 aa17.66■□□□□ 0.42
NUP50-210ENST00000434760 A0A087WZ62 844 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 DDX11L8A8MPP1 907 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 DLX2Q07687 328 aaPredicted RBP17.65■□□□□ 0.42
NUP50-210ENST00000434760 EPHA7Q15375 998 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 NCAPH2Q6IBW4 605 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 LRRC55Q6ZSA7 311 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 C4orf19Q8IY42 314 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 SLFN12Q8IYM2 578 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 COLGALT1Q8NBJ5 622 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 POF1BQ8WVV4 589 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 SCLT1Q96NL6 688 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 CASD1Q96PB1 797 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 FDXACB1Q9BRP7 624 aaPredicted RBP17.65■□□□□ 0.42
NUP50-210ENST00000434760 TMEM117Q9H0C3 514 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 ATP6V0A4Q9HBG4 840 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 CD320Q9NPF0 282 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 RNF216Q9NWF9 866 aaPredicted RBP17.65■□□□□ 0.42
NUP50-210ENST00000434760 RGL1Q9NZL6 768 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 PCDHGC5Q9Y5F6 944 aa17.65■□□□□ 0.42
NUP50-210ENST00000434760 GRXCR2A6NFK2 248 aa17.64■□□□□ 0.41
NUP50-210ENST00000434760 PTCRAQ6ISU1 281 aaPredicted RBP17.64■□□□□ 0.41
NUP50-210ENST00000434760 KSR1Q8IVT5 923 aa17.64■□□□□ 0.41
NUP50-210ENST00000434760 KHSRPQ92945 711 aaKnown RBP eCLIP17.64■□□□□ 0.41
NUP50-210ENST00000434760 DYDC2Q96IM9 177 aa17.64■□□□□ 0.41
NUP50-210ENST00000434760 TRAIPQ9BWF2 469 aa17.64■□□□□ 0.41
NUP50-210ENST00000434760 IFT122Q9HBG6 1241 aa17.64■□□□□ 0.41
NUP50-210ENST00000434760 TYW1Q9NV66 732 aaKnown RBP17.64■□□□□ 0.41
NUP50-210ENST00000434760 CLDND1Q9NY35 253 aa17.64■□□□□ 0.41
NUP50-210ENST00000434760 SUCLA2Q9P2R7 463 aaPredicted RBP17.64■□□□□ 0.41
NUP50-210ENST00000434760 PPME1Q9Y570 386 aa17.64■□□□□ 0.41
NUP50-210ENST00000434760 A0A0U1RQF3 1178 aa17.63■□□□□ 0.41
NUP50-210ENST00000434760 LINC01565O15544 149 aa17.63■□□□□ 0.41
NUP50-210ENST00000434760 NEMFO60524 1076 aa17.63■□□□□ 0.41
NUP50-210ENST00000434760 YWHABP31946 246 aaKnown RBP17.63■□□□□ 0.41
NUP50-210ENST00000434760 CYP4A11Q02928 519 aa17.63■□□□□ 0.41
NUP50-210ENST00000434760 RHPN2Q8IUC4 686 aa17.63■□□□□ 0.41
NUP50-210ENST00000434760 CCDC83Q8IWF9 413 aa17.63■□□□□ 0.41
NUP50-210ENST00000434760 FAM178BQ8IXR5 827 aa17.63■□□□□ 0.41
NUP50-210ENST00000434760 LRRC43Q8N309 656 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms