RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.47■□□□□ 0.875e-7■■□□□ 11.4
HLA-F-220ENST00000434407 ZNF410Q86VK4 478 aa20.47■□□□□ 0.87
HLA-F-220ENST00000434407 HERC6Q8IVU3 1022 aa20.47■□□□□ 0.87
HLA-F-220ENST00000434407 USP28Q96RU2 1077 aa20.47■□□□□ 0.87
HLA-F-220ENST00000434407 PPP1R16BQ96T49 567 aa20.47■□□□□ 0.87
HLA-F-220ENST00000434407 MTRQ99707 1265 aa20.47■□□□□ 0.87
HLA-F-220ENST00000434407 FTHL17Q9BXU8 183 aa20.47■□□□□ 0.87
HLA-F-220ENST00000434407 TMX1Q9H3N1 280 aa20.47■□□□□ 0.87
HLA-F-220ENST00000434407 GINS2Q9Y248 185 aa20.47■□□□□ 0.87
HLA-F-220ENST00000434407 PCDHA11Q9Y5I1 949 aa20.47■□□□□ 0.87
HLA-F-220ENST00000434407 TMEM265A0A087WTH1 108 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 SLC26A4O43511 780 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 RPS6KA5O75582 802 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 DARSP14868 501 aaKnown RBP20.46■□□□□ 0.87
HLA-F-220ENST00000434407 DNAJB2P25686 324 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 PBX2P40425 430 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 NASPP49321 788 aaPredicted RBP20.46■□□□□ 0.87
HLA-F-220ENST00000434407 PKP1Q13835 747 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 BECN1Q14457 450 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 ODR4Q5SWX8 454 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 RTN4RL1Q86UN2 441 aaPredicted RBP20.46■□□□□ 0.87
HLA-F-220ENST00000434407 FAM228AQ86W67 206 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 KCTD17Q8N5Z5 321 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 TCP11Q8WWU5 503 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 PSPC1Q8WXF1 523 aaKnown RBP20.46■□□□□ 0.87
HLA-F-220ENST00000434407 LINC01599Q8WXQ3 324 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 TMEM143Q96AN5 459 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 ATP6V0A4Q9HBG4 840 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 DDX19AQ9NUU7 478 aaKnown RBP20.46■□□□□ 0.87
HLA-F-220ENST00000434407 ST3GAL5Q9UNP4 418 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 KIAA1024Q9UPX6 916 aa20.46■□□□□ 0.87
HLA-F-220ENST00000434407 ENPP3O14638 875 aa20.45■□□□□ 0.86
HLA-F-220ENST00000434407 GPR182O15218 404 aa20.45■□□□□ 0.86
HLA-F-220ENST00000434407 ASAP2O43150 1006 aa20.45■□□□□ 0.86
HLA-F-220ENST00000434407 F13A1P00488 732 aa20.45■□□□□ 0.86
HLA-F-220ENST00000434407 LONP1P36776 959 aaKnown RBP20.45■□□□□ 0.86
HLA-F-220ENST00000434407 GRIN1Q05586 938 aa20.45■□□□□ 0.86
HLA-F-220ENST00000434407 SLC39A14Q15043 492 aa20.45■□□□□ 0.86
HLA-F-220ENST00000434407 RAB30Q15771 203 aa20.45■□□□□ 0.86
HLA-F-220ENST00000434407 RHPN2Q8IUC4 686 aa20.45■□□□□ 0.86
HLA-F-220ENST00000434407 PRPF31Q8WWY3 499 aaKnown RBP20.45■□□□□ 0.86
HLA-F-220ENST00000434407 TOP1MTQ969P6 601 aa20.45■□□□□ 0.86
HLA-F-220ENST00000434407 TSPYL2Q9H2G4 693 aaPredicted RBP20.45■□□□□ 0.86
HLA-F-220ENST00000434407 YBX2Q9Y2T7 364 aaKnown RBP20.45■□□□□ 0.86
HLA-F-220ENST00000434407 COL4A3BPQ9Y5P4 624 aa20.45■□□□□ 0.86
HLA-F-220ENST00000434407 A0A087WZ62 844 aa20.44■□□□□ 0.86
HLA-F-220ENST00000434407 GJB5O95377 273 aa20.44■□□□□ 0.86
HLA-F-220ENST00000434407 AMHP03971 560 aa20.44■□□□□ 0.86
HLA-F-220ENST00000434407 ARL2P36404 184 aa20.44■□□□□ 0.86
HLA-F-220ENST00000434407 RABGGTBP53611 331 aa20.44■□□□□ 0.86
HLA-F-220ENST00000434407 LAMTOR4Q0VGL1 99 aa20.44■□□□□ 0.86
HLA-F-220ENST00000434407 KSR1Q8IVT5 923 aa20.44■□□□□ 0.86
HLA-F-220ENST00000434407 CRIPAKQ8N1N5 446 aa20.44■□□□□ 0.86
HLA-F-220ENST00000434407 NLRP7Q8WX94 980 aa20.44■□□□□ 0.86
HLA-F-220ENST00000434407 ZNF668Q96K58 619 aaPredicted RBP20.44■□□□□ 0.86
HLA-F-220ENST00000434407 CCDC43Q96MW1 224 aaKnown RBP20.44■□□□□ 0.86
HLA-F-220ENST00000434407 PNMA5Q96PV4 448 aa20.44■□□□□ 0.86
HLA-F-220ENST00000434407 FDXACB1Q9BRP7 624 aaPredicted RBP20.44■□□□□ 0.86
HLA-F-220ENST00000434407 GCOM2Q9BZD3 368 aaPredicted RBP20.44■□□□□ 0.86
HLA-F-220ENST00000434407 IFT122Q9HBG6 1241 aa20.44■□□□□ 0.86
HLA-F-220ENST00000434407 BMP2KQ9NSY1 1161 aaPredicted RBP20.44■□□□□ 0.86
HLA-F-220ENST00000434407 MSRAQ9UJ68 235 aa20.44■□□□□ 0.86
HLA-F-220ENST00000434407 FBXO2Q9UK22 296 aaPredicted RBP20.44■□□□□ 0.86
HLA-F-220ENST00000434407 SRPRBQ9Y5M8 271 aaKnown RBP20.44■□□□□ 0.86
HLA-F-220ENST00000434407 TCHHQ07283 1943 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 USO1O60763 962 aaKnown RBP20.43■□□□□ 0.86
HLA-F-220ENST00000434407 EYA4O95677 639 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 BRD1O95696 1058 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 CYP11B2P19099 503 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 POU5F1BQ06416 359 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 GRB10Q13322 594 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 DSC3Q14574 896 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 MXD4Q14582 209 aaPredicted RBP20.43■□□□□ 0.86
HLA-F-220ENST00000434407 TMEM119Q4V9L6 283 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 KCNK18Q7Z418 384 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 MCPH1Q8NEM0 835 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 TIFAQ96CG3 184 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 NT5C3AQ9H0P0 336 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 BHMT2Q9H2M3 363 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 DNM3Q9UQ16 869 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 ZDHHC9Q9Y397 364 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 TRANK1O15050 2925 aa20.43■□□□□ 0.86
HLA-F-220ENST00000434407 ARHGEF35A5YM69 484 aa20.42■□□□□ 0.86
HLA-F-220ENST00000434407 MGEA5O60502 916 aa20.42■□□□□ 0.86
HLA-F-220ENST00000434407 MYOGP15173 224 aa20.42■□□□□ 0.86
HLA-F-220ENST00000434407 MARCKSP29966 332 aaPredicted RBP20.42■□□□□ 0.86
HLA-F-220ENST00000434407 HTRA4P83105 476 aaPredicted RBP20.42■□□□□ 0.86
HLA-F-220ENST00000434407 NFX1Q12986 1120 aaKnown RBP20.42■□□□□ 0.86
HLA-F-220ENST00000434407 PADI6Q6TGC4 694 aa20.42■□□□□ 0.86
HLA-F-220ENST00000434407 TMCO2Q7Z6W1 182 aaPredicted RBP20.42■□□□□ 0.86
HLA-F-220ENST00000434407 IFNLR1Q8IU57 520 aaPredicted RBP20.42■□□□□ 0.86
HLA-F-220ENST00000434407 MYOCDQ8IZQ8 938 aa20.42■□□□□ 0.86
HLA-F-220ENST00000434407 LINC00301Q8NCQ3 95 aa20.42■□□□□ 0.86
HLA-F-220ENST00000434407 ZNF396Q96N95 335 aaPredicted RBP20.42■□□□□ 0.86
HLA-F-220ENST00000434407 RAD9AQ99638 391 aa20.42■□□□□ 0.86
HLA-F-220ENST00000434407 INO80BQ9C086 356 aaPredicted RBP20.42■□□□□ 0.86
HLA-F-220ENST00000434407 TTYH1Q9H313 450 aaPredicted RBP20.42■□□□□ 0.86
HLA-F-220ENST00000434407 MYH11P35749 1972 aa20.42■□□□□ 0.86
HLA-F-220ENST00000434407 E9PMD0 336 aa20.41■□□□□ 0.86
HLA-F-220ENST00000434407 CEBPZQ03701 1054 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms