RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 KLHDC10Q6PID8 442 aa4.79□□□□□ -1.64
LINC01239-201ENST00000433645 RTKN2Q8IZC4 609 aa4.79□□□□□ -1.64
LINC01239-201ENST00000433645 RTF1Q92541 710 aaKnown RBP4.79□□□□□ -1.64
LINC01239-201ENST00000433645 ZNF496Q96IT1 587 aaPredicted RBP4.79□□□□□ -1.64
LINC01239-201ENST00000433645 SAMD11Q96NU1 681 aa4.79□□□□□ -1.64
LINC01239-201ENST00000433645 OSBPL6Q9BZF3 934 aa4.79□□□□□ -1.64
LINC01239-201ENST00000433645 PPP4R1LQ9P1A2 415 aa4.79□□□□□ -1.64
LINC01239-201ENST00000433645 KCNG1Q9UIX4 513 aa4.79□□□□□ -1.64
LINC01239-201ENST00000433645 MSRAQ9UJ68 235 aa4.79□□□□□ -1.64
LINC01239-201ENST00000433645 CTDP1Q9Y5B0 961 aaPredicted RBP4.79□□□□□ -1.64
LINC01239-201ENST00000433645 NUMBLQ9Y6R0 609 aa4.79□□□□□ -1.64
LINC01239-201ENST00000433645 SBNO2Q9Y2G9 1366 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 OPHN1O60890 802 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 DNAJC6O75061 913 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 RAB11FIP3O75154 756 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 MRE11P49959 708 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 RAC3P60763 192 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 STRN3Q13033 797 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 BROXQ5VW32 411 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 GLB1LQ6UWU2 654 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 LARP4Q71RC2 724 aaKnown RBP eCLIP4.78□□□□□ -1.64
LINC01239-201ENST00000433645 GPR155Q7Z3F1 870 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 STRA8Q7Z7C7 330 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 PPP1R14CQ8TAE6 165 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 NKD2Q969F2 451 aaPredicted RBP4.78□□□□□ -1.64
LINC01239-201ENST00000433645 MYL10Q9BUA6 226 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 BDH2Q9BUT1 245 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 MEGF9Q9H1U4 602 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 POFUT1Q9H488 388 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 POLR3BQ9NW08 1133 aaPredicted RBP4.78□□□□□ -1.64
LINC01239-201ENST00000433645 CDC42EP3Q9UKI2 254 aa4.78□□□□□ -1.64
LINC01239-201ENST00000433645 ZNF536O15090 1300 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 MYPNQ86TC9 1320 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 NPEPPSL1A6NEC2 478 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 K7ESM1 405 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 ELL2O00472 640 aaPredicted RBP4.77□□□□□ -1.65
LINC01239-201ENST00000433645 HGFACQ04756 655 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 PLP2Q04941 152 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 EFEMP1Q12805 493 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 FILIP1Q7Z7B0 1213 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 CXorf67Q86X51 503 aaPredicted RBP4.77□□□□□ -1.65
LINC01239-201ENST00000433645 CIR1Q86X95 450 aaPredicted RBP4.77□□□□□ -1.65
LINC01239-201ENST00000433645 DNERQ8NFT8 737 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 NEIL1Q96FI4 390 aaPredicted RBP4.77□□□□□ -1.65
LINC01239-201ENST00000433645 DYDC2Q96IM9 177 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 HIST1H2AHQ96KK5 128 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 ACAP3Q96P50 834 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 LMF1Q96S06 567 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 HIST1H2AJQ99878 128 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 NELFAQ9H3P2 528 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 MTG2Q9H4K7 406 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 PTPN22Q9Y2R2 807 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 NOC2LQ9Y3T9 749 aaKnown RBP4.77□□□□□ -1.65
LINC01239-201ENST00000433645 NR2E1Q9Y466 385 aa4.77□□□□□ -1.65
LINC01239-201ENST00000433645 ST20-MTHFSA0A0A6YYL1 179 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 K7ESF4 209 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 KDM1AO60341 852 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 PFKMP08237 780 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 CR2P20023 1033 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 RPS19P39019 145 aaKnown RBP4.76□□□□□ -1.65
LINC01239-201ENST00000433645 MANFP55145 182 aaKnown RBP4.76□□□□□ -1.65
LINC01239-201ENST00000433645 ANTXR2P58335 489 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 NFKB2Q00653 900 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 STAT4Q14765 748 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 RNF151Q2KHN1 245 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 SPATS1Q496A3 300 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 GAGE13Q4V321 117 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 RNF219Q5W0B1 726 aaPredicted RBP4.76□□□□□ -1.65
LINC01239-201ENST00000433645 UBR7Q8N806 425 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 CDYL2Q8N8U2 506 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 RABGGTAQ92696 567 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 SLC7A6OSQ96CW6 309 aaPredicted RBP4.76□□□□□ -1.65
LINC01239-201ENST00000433645 PAWRQ96IZ0 340 aaKnown RBP4.76□□□□□ -1.65
LINC01239-201ENST00000433645 WDR92Q96MX6 357 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 SLC6A15Q9H2J7 730 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 PUF60Q9UHX1 559 aaKnown RBP4.76□□□□□ -1.65
LINC01239-201ENST00000433645 OAZ3Q9UMX2 235 aa4.76□□□□□ -1.65
LINC01239-201ENST00000433645 KRTAP9-7A8MTY7 169 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 PATE3B3GLJ2 98 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 MATN2O00339 956 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 GPR42O15529 346 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 GPR39O43194 453 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 MTSS1O43312 755 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 NRP2O60462 931 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 FSBPO95073 299 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 POU3F3P20264 500 aaPredicted RBP4.75□□□□□ -1.65
LINC01239-201ENST00000433645 CNGA1P29973 690 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 STAT5BP51692 787 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 RRADP55042 308 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 TBR1Q16650 682 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 ZBTB41Q5SVQ8 909 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 UNQ6494/PRO21346Q6UXR6 183 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 CLEC14AQ86T13 490 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 SPATS2Q86XZ4 545 aaKnown RBP4.75□□□□□ -1.65
LINC01239-201ENST00000433645 CLRN3Q8NCR9 226 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 CFHR4Q92496 578 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 FERMT2Q96AC1 680 aa4.75□□□□□ -1.65
LINC01239-201ENST00000433645 C1QTNF3Q9BXJ4 246 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms