RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 MXD4Q14582 209 aaPredicted RBP20.47■□□□□ 0.87
RFTN1-202ENST00000431547 KIZQ2M2Z5 673 aa20.47■□□□□ 0.87
RFTN1-202ENST00000431547 NAALADL2Q58DX5 795 aa20.47■□□□□ 0.87
RFTN1-202ENST00000431547 FBXO47Q5MNV8 452 aa20.47■□□□□ 0.87
RFTN1-202ENST00000431547 PRPF38BQ5VTL8 546 aaKnown RBP20.47■□□□□ 0.87
RFTN1-202ENST00000431547 RINT1Q6NUQ1 792 aa20.47■□□□□ 0.87
RFTN1-202ENST00000431547 C1orf186Q6ZWK4 172 aa20.47■□□□□ 0.87
RFTN1-202ENST00000431547 C16orf59Q7L2K0 433 aa20.47■□□□□ 0.87
RFTN1-202ENST00000431547 RHPN2Q8IUC4 686 aa20.47■□□□□ 0.87
RFTN1-202ENST00000431547 USP38Q8NB14 1042 aa20.47■□□□□ 0.87
RFTN1-202ENST00000431547 PANK2Q9BZ23 570 aa20.47■□□□□ 0.87
RFTN1-202ENST00000431547 CDHR5Q9HBB8 845 aa20.47■□□□□ 0.87
RFTN1-202ENST00000431547 KCND2Q9NZV8 630 aa20.47■□□□□ 0.87
RFTN1-202ENST00000431547 WDR81Q562E7 1941 aa20.47■□□□□ 0.87
RFTN1-202ENST00000431547 A0A087X0B3 334 aa20.46■□□□□ 0.87
RFTN1-202ENST00000431547 A0A1W2PQ27 194 aa20.46■□□□□ 0.87
RFTN1-202ENST00000431547 A0A1W2PQ64 194 aa20.46■□□□□ 0.87
RFTN1-202ENST00000431547 A0A1W2PQD8 194 aa20.46■□□□□ 0.87
RFTN1-202ENST00000431547 SSBP05455 408 aaKnown RBP eCLIP20.46■□□□□ 0.87
RFTN1-202ENST00000431547 LAMTOR4Q0VGL1 99 aa20.46■□□□□ 0.87
RFTN1-202ENST00000431547 LPIN1Q14693 890 aa20.46■□□□□ 0.87
RFTN1-202ENST00000431547 DEFB128Q7Z7B8 93 aa20.46■□□□□ 0.87
RFTN1-202ENST00000431547 ZNF410Q86VK4 478 aa20.46■□□□□ 0.87
RFTN1-202ENST00000431547 LARP4BQ92615 738 aaKnown RBP20.46■□□□□ 0.87
RFTN1-202ENST00000431547 RUSC1Q9BVN2 902 aa20.46■□□□□ 0.87
RFTN1-202ENST00000431547 TIPINQ9BVW5 301 aa20.46■□□□□ 0.87
RFTN1-202ENST00000431547 OSBPL7Q9BZF2 842 aa20.46■□□□□ 0.87
RFTN1-202ENST00000431547 GINS2Q9Y248 185 aa20.46■□□□□ 0.87
RFTN1-202ENST00000431547 COL4A3BPQ9Y5P4 624 aa20.46■□□□□ 0.87
RFTN1-202ENST00000431547 ACRP10323 421 aa20.45■□□□□ 0.86
RFTN1-202ENST00000431547 GUCY2CP25092 1073 aa20.45■□□□□ 0.86
RFTN1-202ENST00000431547 STAT6P42226 847 aa20.45■□□□□ 0.86
RFTN1-202ENST00000431547 MCM6Q14566 821 aa20.45■□□□□ 0.86
RFTN1-202ENST00000431547 PLEKHG4Q58EX7 1191 aa20.45■□□□□ 0.86
RFTN1-202ENST00000431547 FAM102BQ5T8I3 360 aa20.45■□□□□ 0.86
RFTN1-202ENST00000431547 PSRC1Q6PGN9 363 aaPredicted RBP20.45■□□□□ 0.86
RFTN1-202ENST00000431547 MAEAQ7L5Y9 396 aa20.45■□□□□ 0.86
RFTN1-202ENST00000431547 KSR1Q8IVT5 923 aa20.45■□□□□ 0.86
RFTN1-202ENST00000431547 PDILTQ8N807 584 aa20.45■□□□□ 0.86
RFTN1-202ENST00000431547 PPP1R16BQ96T49 567 aa20.45■□□□□ 0.86
RFTN1-202ENST00000431547 UBE2OQ9C0C9 1292 aaKnown RBP20.45■□□□□ 0.86
RFTN1-202ENST00000431547 POLR3FQ9H1D9 316 aaPredicted RBP20.45■□□□□ 0.86
RFTN1-202ENST00000431547 PRO3102Q9H379 93 aa20.45■□□□□ 0.86
RFTN1-202ENST00000431547 TRIP12Q14669 1992 aaPredicted RBP20.45■□□□□ 0.86
RFTN1-202ENST00000431547 LTBP2Q14767 1821 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 FAM237AA0A1B0GTK4 181 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 FGBP02675 491 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 GHRP10912 638 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 EIF4BP23588 611 aaKnown RBP20.44■□□□□ 0.86
RFTN1-202ENST00000431547 POU5F1BQ06416 359 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 E2F4Q16254 413 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 CSPP1Q1MSJ5 1256 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 ARSHQ5FYA8 562 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 TMEM240Q5SV17 173 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 TSHZ1Q6ZSZ6 1077 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 FAM43BQ6ZT52 329 aaPredicted RBP20.44■□□□□ 0.86
RFTN1-202ENST00000431547 ZNF365Q70YC5 407 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 IQUBQ8NA54 791 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 NLRP7Q8WX94 980 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 KIFAP3Q92845 792 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 OSMRQ99650 979 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 PYM1Q9BRP8 204 aaKnown RBP20.44■□□□□ 0.86
RFTN1-202ENST00000431547 CUEDC2Q9H467 287 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 GPRC5CQ9NQ84 441 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 KCNH3Q9ULD8 1083 aa20.44■□□□□ 0.86
RFTN1-202ENST00000431547 KAT6AQ92794 2004 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 A0A087WZ62 844 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 SRGAP2CP0DJJ0 459 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 DARSP14868 501 aaKnown RBP20.43■□□□□ 0.86
RFTN1-202ENST00000431547 GLRA2P23416 452 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 TFDP1Q14186 410 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 DHX8Q14562 1220 aaKnown RBP20.43■□□□□ 0.86
RFTN1-202ENST00000431547 CNKSR3Q6P9H4 555 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 SV2BQ7L1I2 683 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 GPBP1Q86WP2 473 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 DBF4BQ8NFT6 615 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 ASAP3Q8TDY4 903 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 TMEM40Q8WWA1 233 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 SEPT8Q92599 483 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 NLRP4Q96MN2 994 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 SCLT1Q96NL6 688 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.43■□□□□ 0.86
RFTN1-202ENST00000431547 FDXACB1Q9BRP7 624 aaPredicted RBP20.43■□□□□ 0.86
RFTN1-202ENST00000431547 GCOM2Q9BZD3 368 aaPredicted RBP20.43■□□□□ 0.86
RFTN1-202ENST00000431547 AGO3Q9H9G7 860 aaKnown RBP20.43■□□□□ 0.86
RFTN1-202ENST00000431547 IFT122Q9HBG6 1241 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 HPSEQ9Y251 543 aa20.43■□□□□ 0.86
RFTN1-202ENST00000431547 POLR2DO15514 142 aaKnown RBP20.42■□□□□ 0.86
RFTN1-202ENST00000431547 RPS6KA5O75582 802 aa20.42■□□□□ 0.86
RFTN1-202ENST00000431547 ACTN1P12814 892 aa20.42■□□□□ 0.86
RFTN1-202ENST00000431547 ODR4Q5SWX8 454 aa20.42■□□□□ 0.86
RFTN1-202ENST00000431547 CHRDL2Q6WN34 429 aa20.42■□□□□ 0.86
RFTN1-202ENST00000431547 DAW1Q8N136 415 aa20.42■□□□□ 0.86
RFTN1-202ENST00000431547 RNF149Q8NC42 400 aa20.42■□□□□ 0.86
RFTN1-202ENST00000431547 APBB2Q92870 758 aa20.42■□□□□ 0.86
RFTN1-202ENST00000431547 ZNF668Q96K58 619 aaPredicted RBP20.42■□□□□ 0.86
RFTN1-202ENST00000431547 DRC1Q96MC2 740 aa20.42■□□□□ 0.86
RFTN1-202ENST00000431547 IFIH1Q9BYX4 1025 aaKnown RBP20.42■□□□□ 0.86
RFTN1-202ENST00000431547 INO80BQ9C086 356 aaPredicted RBP20.42■□□□□ 0.86
RFTN1-202ENST00000431547 PADI3Q9ULW8 664 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms