RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 NR3C2P08235 984 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 PFKMP08237 780 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 TUBB8Q3ZCM7 444 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 NFXL1Q6ZNB6 911 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 AENQ8WTP8 325 aaKnown RBP10.55□□□□□ -0.72
NEDD1-203ENST00000429527 RMDN3Q96TC7 470 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 ABCB6Q9NP58 842 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 PDGFCQ9NRA1 345 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 CTAGE15A4D2H0 777 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 STXBP3O00186 592 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 WNT7AO00755 349 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 TLR3O15455 904 aaKnown RBP10.55□□□□□ -0.72
NEDD1-203ENST00000429527 PARNO95453 639 aaKnown RBP10.55□□□□□ -0.72
NEDD1-203ENST00000429527 FOSP01100 380 aaPredicted RBP10.55□□□□□ -0.72
NEDD1-203ENST00000429527 MMP3P08254 477 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 CTAGE8P0CG41 777 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 VSNL1P62760 191 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 GNL2Q13823 731 aaKnown RBP10.55□□□□□ -0.72
NEDD1-203ENST00000429527 RPAINQ86UA6 219 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 CTAGE6Q86UF2 777 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 CTAGE4Q8IX94 777 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 EPSTI1Q96J88 318 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 AK8Q96MA6 479 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 GLT1D1Q96MS3 346 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 ACBD3Q9H3P7 528 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 STARD7Q9NQZ5 370 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 BARHL2Q9NY43 387 aa10.55□□□□□ -0.72
NEDD1-203ENST00000429527 RNF225M0QZC1 329 aaPredicted RBP10.54□□□□□ -0.72
NEDD1-203ENST00000429527 ECM2O94769 699 aaPredicted RBP10.54□□□□□ -0.72
NEDD1-203ENST00000429527 ARIH2O95376 493 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 PLEKHA8P1O95397 391 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 PGK1P00558 417 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 SMAD3P84022 425 aaKnown RBP10.54□□□□□ -0.72
NEDD1-203ENST00000429527 CKAP4Q07065 602 aaKnown RBP10.54□□□□□ -0.72
NEDD1-203ENST00000429527 CELF3Q5SZQ8 465 aaKnown RBP10.54□□□□□ -0.72
NEDD1-203ENST00000429527 TDHQ8IZJ6 230 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 KCNJ18B7U540 433 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 F2P00734 622 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 CALML3P27482 149 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 KCNJ12Q14500 433 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 GRAMD1CQ8IYS0 662 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 TBC1D5Q92609 795 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 DESI2Q9BSY9 194 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 TSGA10Q9BZW7 698 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 CPVLQ9H3G5 476 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 BRMS1Q9HCU9 246 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 NAP1L2Q9ULW6 460 aaPredicted RBP10.54□□□□□ -0.72
NEDD1-203ENST00000429527 HPCAL4Q9UM19 191 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 PITPNM1O00562 1244 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 RPN1P04843 607 aaKnown RBP10.54□□□□□ -0.72
NEDD1-203ENST00000429527 DNM2P50570 870 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 MFSD5Q6N075 450 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 ZC3H3Q8IXZ2 948 aaKnown RBP10.54□□□□□ -0.72
NEDD1-203ENST00000429527 OR6J1Q8NGC5 347 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 OR8K1Q8NGG5 319 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 CAVIN3Q969G5 261 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 CDHR1Q96JP9 859 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 C7orf25Q9BPX7 421 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 MYL10Q9BUA6 226 aa10.54□□□□□ -0.72
NEDD1-203ENST00000429527 EPN1Q9Y6I3 576 aaPredicted RBP10.54□□□□□ -0.72
NEDD1-203ENST00000429527 CES2O00748 559 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 CDK11BP21127 795 aaKnown RBP10.53□□□□□ -0.72
NEDD1-203ENST00000429527 MRPS9P82933 396 aaKnown RBP10.53□□□□□ -0.72
NEDD1-203ENST00000429527 MAP9Q49MG5 647 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 ARHGEF16Q5VV41 709 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 ISM2Q6H9L7 571 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 MREGQ8N565 214 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 COG1Q8WTW3 980 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 GBF1Q92538 1859 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 KATNAL1Q9BW62 490 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 ZMYND12Q9H0C1 365 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 DISC1Q9NRI5 854 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 SEC63Q9UGP8 760 aaKnown RBP10.53□□□□□ -0.72
NEDD1-203ENST00000429527 RALGAPA2Q2PPJ7 1873 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 DOCK5Q9H7D0 1870 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 DCDC2CA8MYV0 355 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 SCG2P13521 617 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 RXRAP19793 462 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 CORO7P57737 925 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 KRT83P78385 493 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 SKOR1P84550 965 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 TLE2Q04725 743 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 EHHADHQ08426 723 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 USH1GQ495M9 461 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 BRDTQ58F21 947 aaPredicted RBP10.53□□□□□ -0.72
NEDD1-203ENST00000429527 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.53□□□□□ -0.72
NEDD1-203ENST00000429527 KAT2BQ92831 832 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 EHMT1Q9H9B1 1298 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 GGA2Q9UJY4 613 aa10.53□□□□□ -0.72
NEDD1-203ENST00000429527 A0A0U1RQJ8 604 aa10.52□□□□□ -0.72
NEDD1-203ENST00000429527 LRRIQ3A6PVS8 624 aaPredicted RBP10.52□□□□□ -0.72
NEDD1-203ENST00000429527 MYCP01106 439 aaPredicted RBP10.52□□□□□ -0.72
NEDD1-203ENST00000429527 SUPT20HL2P0C7V6 817 aa10.52□□□□□ -0.72
NEDD1-203ENST00000429527 SREBF1P36956 1147 aa10.52□□□□□ -0.72
NEDD1-203ENST00000429527 NOP2P46087 812 aaKnown RBP10.52□□□□□ -0.72
NEDD1-203ENST00000429527 MAPK8IP2Q13387 824 aaPredicted RBP10.52□□□□□ -0.72
NEDD1-203ENST00000429527 MKRN4PQ13434 485 aaPredicted RBP10.52□□□□□ -0.72
NEDD1-203ENST00000429527 ITGA7Q13683 1181 aa10.52□□□□□ -0.72
NEDD1-203ENST00000429527 ZNF569Q5MCW4 686 aa10.52□□□□□ -0.72
NEDD1-203ENST00000429527 GBP6Q6ZN66 633 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms