RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 MIER3Q7Z3K6 550 aa17.5■□□□□ 0.39
SEC13-210ENST00000428626 RBM23Q86U06 439 aaKnown RBP17.5■□□□□ 0.39
SEC13-210ENST00000428626 ADHFE1Q8IWW8 467 aa17.5■□□□□ 0.39
SEC13-210ENST00000428626 COLGALT1Q8NBJ5 622 aa17.5■□□□□ 0.39
SEC13-210ENST00000428626 CASD1Q96PB1 797 aa17.5■□□□□ 0.39
SEC13-210ENST00000428626 MAP7D2Q96T17 732 aa17.5■□□□□ 0.39
SEC13-210ENST00000428626 ELAC1Q9H777 363 aaKnown RBP17.5■□□□□ 0.39
SEC13-210ENST00000428626 ATP6V0A4Q9HBG4 840 aa17.5■□□□□ 0.39
SEC13-210ENST00000428626 PDRG1Q9NUG6 133 aa17.5■□□□□ 0.39
SEC13-210ENST00000428626 EML1O00423 815 aa17.49■□□□□ 0.39
SEC13-210ENST00000428626 FGF18O76093 207 aa17.49■□□□□ 0.39
SEC13-210ENST00000428626 DARSP14868 501 aaKnown RBP17.49■□□□□ 0.39
SEC13-210ENST00000428626 ATF7P17544 494 aaPredicted RBP17.49■□□□□ 0.39
SEC13-210ENST00000428626 PBX3P40426 434 aa17.49■□□□□ 0.39
SEC13-210ENST00000428626 MTERF2Q49AM1 385 aa17.49■□□□□ 0.39
SEC13-210ENST00000428626 ODR4Q5SWX8 454 aa17.49■□□□□ 0.39
SEC13-210ENST00000428626 FAM43BQ6ZT52 329 aaPredicted RBP17.49■□□□□ 0.39
SEC13-210ENST00000428626 EFHBQ8N7U6 833 aa17.49■□□□□ 0.39
SEC13-210ENST00000428626 VN1R2Q8NFZ6 395 aa17.49■□□□□ 0.39
SEC13-210ENST00000428626 OXER1Q8TDS5 423 aa17.49■□□□□ 0.39
SEC13-210ENST00000428626 PHF20Q9BVI0 1012 aa17.49■□□□□ 0.39
SEC13-210ENST00000428626 NIFKQ9BYG3 293 aaKnown RBP17.49■□□□□ 0.39
SEC13-210ENST00000428626 PRKAG3Q9UGI9 489 aa17.49■□□□□ 0.39
SEC13-210ENST00000428626 CD207Q9UJ71 328 aa17.49■□□□□ 0.39
SEC13-210ENST00000428626 TPCN1Q9ULQ1 816 aa17.49■□□□□ 0.39
SEC13-210ENST00000428626 BARX2Q9UMQ3 279 aaPredicted RBP17.49■□□□□ 0.39
SEC13-210ENST00000428626 IGKV6-21A0A0C4DH24 114 aa17.48■□□□□ 0.39
SEC13-210ENST00000428626 PER2O15055 1255 aa17.48■□□□□ 0.39
SEC13-210ENST00000428626 CTDNEP1O95476 244 aa17.48■□□□□ 0.39
SEC13-210ENST00000428626 TMOD1P28289 359 aa17.48■□□□□ 0.39
SEC13-210ENST00000428626 TBC1D8BQ0IIM8 1120 aa17.48■□□□□ 0.39
SEC13-210ENST00000428626 SMAD4Q13485 552 aaKnown RBP17.48■□□□□ 0.39
SEC13-210ENST00000428626 NONOQ15233 471 aaKnown RBP eCLIP17.48■□□□□ 0.39
SEC13-210ENST00000428626 EARS2Q5JPH6 523 aaKnown RBP17.48■□□□□ 0.39
SEC13-210ENST00000428626 CLLU1OSQ5K130 101 aa17.48■□□□□ 0.39
SEC13-210ENST00000428626 SPOUT1Q5T280 376 aaKnown RBP17.48■□□□□ 0.39
SEC13-210ENST00000428626 MOXD1Q6UVY6 613 aa17.48■□□□□ 0.39
SEC13-210ENST00000428626 ECHDC2Q86YB7 292 aa17.48■□□□□ 0.39
SEC13-210ENST00000428626 RDM1Q8NG50 284 aa17.48■□□□□ 0.39
SEC13-210ENST00000428626 C22orf23Q9BZE7 217 aa17.48■□□□□ 0.39
SEC13-210ENST00000428626 TMEM117Q9H0C3 514 aa17.48■□□□□ 0.39
SEC13-210ENST00000428626 SEPT9Q9UHD8 586 aaPredicted RBP17.48■□□□□ 0.39
SEC13-210ENST00000428626 PCDHB12Q9Y5F1 795 aa17.48■□□□□ 0.39
SEC13-210ENST00000428626 MUC6Q6W4X9 2439 aa17.47■□□□□ 0.39
SEC13-210ENST00000428626 FSCN2O14926 492 aa17.47■□□□□ 0.39
SEC13-210ENST00000428626 EYA4O95677 639 aa17.47■□□□□ 0.39
SEC13-210ENST00000428626 NDUFV1P49821 464 aa17.47■□□□□ 0.39
SEC13-210ENST00000428626 XKR3Q5GH77 459 aa17.47■□□□□ 0.39
SEC13-210ENST00000428626 ANO5Q75V66 913 aa17.47■□□□□ 0.39
SEC13-210ENST00000428626 ZNF598Q86UK7 904 aaKnown RBP17.47■□□□□ 0.39
SEC13-210ENST00000428626 ZNF579Q8NAF0 562 aaKnown RBP17.47■□□□□ 0.39
SEC13-210ENST00000428626 WRAP73Q9P2S5 460 aaPredicted RBP17.47■□□□□ 0.39
SEC13-210ENST00000428626 DDX25Q9UHL0 483 aaKnown RBP17.47■□□□□ 0.39
SEC13-210ENST00000428626 VAV3Q9UKW4 847 aa17.47■□□□□ 0.39
SEC13-210ENST00000428626 FAM50BQ9Y247 325 aa17.47■□□□□ 0.39
SEC13-210ENST00000428626 FAM205CA6NFA0 338 aa17.46■□□□□ 0.39
SEC13-210ENST00000428626 PFKFB2O60825 505 aa17.46■□□□□ 0.39
SEC13-210ENST00000428626 PLA2G5P39877 138 aa17.46■□□□□ 0.39
SEC13-210ENST00000428626 UBE3AQ05086 875 aa17.46■□□□□ 0.39
SEC13-210ENST00000428626 LETM2Q2VYF4 491 aa17.46■□□□□ 0.39
SEC13-210ENST00000428626 PLA2G4FQ68DD2 849 aa17.46■□□□□ 0.39
SEC13-210ENST00000428626 GALNT17Q6IS24 598 aa17.46■□□□□ 0.39
SEC13-210ENST00000428626 KRT25Q7Z3Z0 450 aa17.46■□□□□ 0.39
SEC13-210ENST00000428626 THNSL1Q8IYQ7 743 aa17.46■□□□□ 0.39
SEC13-210ENST00000428626 SMRP1Q8NCR6 262 aa17.46■□□□□ 0.39
SEC13-210ENST00000428626 NLRP7Q8WX94 980 aa17.46■□□□□ 0.39
SEC13-210ENST00000428626 KCNMB3Q9NPA1 279 aa17.46■□□□□ 0.39
SEC13-210ENST00000428626 TLR9Q9NR96 1032 aa17.46■□□□□ 0.39
SEC13-210ENST00000428626 TECTAO75443 2155 aa17.45■□□□□ 0.38
SEC13-210ENST00000428626 A0A087WZ62 844 aa17.45■□□□□ 0.38
SEC13-210ENST00000428626 A0A0U1RQF3 1178 aa17.45■□□□□ 0.38
SEC13-210ENST00000428626 DDX11L8A8MPP1 907 aa17.45■□□□□ 0.38
SEC13-210ENST00000428626 DCXO43602 365 aa17.45■□□□□ 0.38
SEC13-210ENST00000428626 FDPSP14324 419 aaKnown RBP17.45■□□□□ 0.38
SEC13-210ENST00000428626 ZSCAN20P17040 1043 aaPredicted RBP17.45■□□□□ 0.38
SEC13-210ENST00000428626 LAG3P18627 525 aa17.45■□□□□ 0.38
SEC13-210ENST00000428626 NPEPPSP55786 919 aa17.45■□□□□ 0.38
SEC13-210ENST00000428626 COASYQ13057 564 aa17.45■□□□□ 0.38
SEC13-210ENST00000428626 CPLX2Q6PUV4 134 aaKnown RBP17.45■□□□□ 0.38
SEC13-210ENST00000428626 KSR1Q8IVT5 923 aa17.45■□□□□ 0.38
SEC13-210ENST00000428626 FAM177A1Q8N128 213 aaPredicted RBP17.45■□□□□ 0.38
SEC13-210ENST00000428626 RNF169Q8NCN4 708 aa17.45■□□□□ 0.38
SEC13-210ENST00000428626 MICAL1Q8TDZ2 1067 aa17.45■□□□□ 0.38
SEC13-210ENST00000428626 HAS1Q92839 578 aa17.45■□□□□ 0.38
SEC13-210ENST00000428626 FDXACB1Q9BRP7 624 aaPredicted RBP17.45■□□□□ 0.38
SEC13-210ENST00000428626 SLKQ9H2G2 1235 aaPredicted RBP17.45■□□□□ 0.38
SEC13-210ENST00000428626 TLE6Q9H808 572 aa17.45■□□□□ 0.38
SEC13-210ENST00000428626 AAASQ9NRG9 546 aa17.45■□□□□ 0.38
SEC13-210ENST00000428626 STK36Q9NRP7 1315 aa17.45■□□□□ 0.38
SEC13-210ENST00000428626 PRR33A8MZF0 331 aa17.44■□□□□ 0.38
SEC13-210ENST00000428626 MAFO75444 373 aaPredicted RBP17.44■□□□□ 0.38
SEC13-210ENST00000428626 LARGE1O95461 756 aa17.44■□□□□ 0.38
SEC13-210ENST00000428626 ALADP13716 330 aa17.44■□□□□ 0.38
SEC13-210ENST00000428626 PLCB3Q01970 1234 aa17.44■□□□□ 0.38
SEC13-210ENST00000428626 PPP2R5CQ13362 524 aa17.44■□□□□ 0.38
SEC13-210ENST00000428626 KCNC3Q14003 757 aa17.44■□□□□ 0.38
SEC13-210ENST00000428626 DUSP6Q16828 381 aa17.44■□□□□ 0.38
SEC13-210ENST00000428626 PLPP4Q5VZY2 271 aa17.44■□□□□ 0.38
SEC13-210ENST00000428626 KCNT2Q6UVM3 1135 aa17.44■□□□□ 0.38
SEC13-210ENST00000428626 ZNF710Q8N1W2 664 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms