RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 TPRNQ4KMQ1 711 aa26.71■■□□□ 1.87
APOE-202ENST00000425718 FAM102BQ5T8I3 360 aa26.71■■□□□ 1.87
APOE-202ENST00000425718 RUFY4Q6ZNE9 571 aa26.71■■□□□ 1.87
APOE-202ENST00000425718 ZNF410Q86VK4 478 aa26.71■■□□□ 1.87
APOE-202ENST00000425718 CNNM3Q8NE01 707 aa26.71■■□□□ 1.87
APOE-202ENST00000425718 NOC4LQ9BVI4 516 aaKnown RBP26.71■■□□□ 1.87
APOE-202ENST00000425718 XPNPEP1Q9NQW7 623 aa26.71■■□□□ 1.87
APOE-202ENST00000425718 PHLPP2Q6ZVD8 1323 aa26.7■■□□□ 1.87
APOE-202ENST00000425718 TBCAO75347 108 aaKnown RBP26.7■■□□□ 1.86
APOE-202ENST00000425718 CKBP12277 381 aa26.7■■□□□ 1.86
APOE-202ENST00000425718 SELPP16109 830 aa26.7■■□□□ 1.86
APOE-202ENST00000425718 SCP2P22307 547 aa26.7■■□□□ 1.86
APOE-202ENST00000425718 TRIM71Q2Q1W2 868 aaKnown RBP26.7■■□□□ 1.86
APOE-202ENST00000425718 FAM26DQ5JW98 314 aa26.7■■□□□ 1.86
APOE-202ENST00000425718 ODR4Q5SWX8 454 aa26.7■■□□□ 1.86
APOE-202ENST00000425718 C7orf61Q8IZ16 206 aa26.7■■□□□ 1.86
APOE-202ENST00000425718 FMR1NBQ8N0W7 255 aaPredicted RBP26.7■■□□□ 1.86
APOE-202ENST00000425718 RUSC1Q9BVN2 902 aa26.7■■□□□ 1.86
APOE-202ENST00000425718 INO80BQ9C086 356 aaPredicted RBP26.7■■□□□ 1.86
APOE-202ENST00000425718 GOLPH3LQ9H4A5 285 aa26.7■■□□□ 1.86
APOE-202ENST00000425718 PRDM5Q9NQX1 630 aaPredicted RBP26.7■■□□□ 1.86
APOE-202ENST00000425718 COL4A3BPQ9Y5P4 624 aa26.7■■□□□ 1.86
APOE-202ENST00000425718 TRPV2Q9Y5S1 764 aa26.7■■□□□ 1.86
APOE-202ENST00000425718 SQORQ9Y6N5 450 aa26.7■■□□□ 1.86
APOE-202ENST00000425718 ACTN4O43707 911 aaKnown RBP26.69■■□□□ 1.86
APOE-202ENST00000425718 RAG1P15918 1043 aa26.69■■□□□ 1.86
APOE-202ENST00000425718 RFC2P35250 354 aa26.69■■□□□ 1.86
APOE-202ENST00000425718 ARL2P36404 184 aa26.69■■□□□ 1.86
APOE-202ENST00000425718 POU5F1BQ06416 359 aa26.69■■□□□ 1.86
APOE-202ENST00000425718 CNNM4Q6P4Q7 775 aa26.69■■□□□ 1.86
APOE-202ENST00000425718 KRBA2Q6ZNG9 492 aa26.69■■□□□ 1.86
APOE-202ENST00000425718 ELOA2Q8IYF1 753 aaPredicted RBP26.69■■□□□ 1.86
APOE-202ENST00000425718 SLC17A8Q8NDX2 589 aa26.69■■□□□ 1.86
APOE-202ENST00000425718 DHX38Q92620 1227 aaKnown RBP26.69■■□□□ 1.86
APOE-202ENST00000425718 TMEM143Q96AN5 459 aa26.69■■□□□ 1.86
APOE-202ENST00000425718 POLR3FQ9H1D9 316 aaPredicted RBP26.69■■□□□ 1.86
APOE-202ENST00000425718 LMBRD1Q9NUN5 540 aa26.69■■□□□ 1.86
APOE-202ENST00000425718 LARSQ9P2J5 1176 aaKnown RBP26.69■■□□□ 1.86
APOE-202ENST00000425718 SERTAD1Q9UHV2 236 aa26.69■■□□□ 1.86
APOE-202ENST00000425718 RSPH10B2B2RC85 870 aa26.68■■□□□ 1.86
APOE-202ENST00000425718 GADD45BO75293 160 aaPredicted RBP26.68■■□□□ 1.86
APOE-202ENST00000425718 FAM13AO94988 1023 aa26.68■■□□□ 1.86
APOE-202ENST00000425718 TIMP1P01033 207 aa26.68■■□□□ 1.86
APOE-202ENST00000425718 RSPH10BP0C881 870 aa26.68■■□□□ 1.86
APOE-202ENST00000425718 ABCD1P33897 745 aa26.68■■□□□ 1.86
APOE-202ENST00000425718 LRRC8DQ7L1W4 858 aa26.68■■□□□ 1.86
APOE-202ENST00000425718 RHPN2Q8IUC4 686 aa26.68■■□□□ 1.86
APOE-202ENST00000425718 USP38Q8NB14 1042 aa26.68■■□□□ 1.86
APOE-202ENST00000425718 ENGASEQ8NFI3 743 aa26.68■■□□□ 1.86
APOE-202ENST00000425718 LRRC15Q8TF66 581 aa26.68■■□□□ 1.86
APOE-202ENST00000425718 SCLT1Q96NL6 688 aa26.68■■□□□ 1.86
APOE-202ENST00000425718 H0YCG3 227 aa26.67■■□□□ 1.86
APOE-202ENST00000425718 HIP1RO75146 1068 aa26.67■■□□□ 1.86
APOE-202ENST00000425718 MBD3O95983 291 aa26.67■■□□□ 1.86
APOE-202ENST00000425718 GAP43P17677 238 aa26.67■■□□□ 1.86
APOE-202ENST00000425718 CRYBB1P53674 252 aaPredicted RBP26.67■■□□□ 1.86
APOE-202ENST00000425718 DMP1Q13316 513 aaPredicted RBP26.67■■□□□ 1.86
APOE-202ENST00000425718 LONRF3Q496Y0 759 aa26.67■■□□□ 1.86
APOE-202ENST00000425718 TMEM199Q8N511 208 aa26.67■■□□□ 1.86
APOE-202ENST00000425718 PRPF31Q8WWY3 499 aaKnown RBP26.67■■□□□ 1.86
APOE-202ENST00000425718 DDX12PQ92771 950 aa26.67■■□□□ 1.86
APOE-202ENST00000425718 CCDC47Q96A33 483 aaKnown RBP26.67■■□□□ 1.86
APOE-202ENST00000425718 C7orf25Q9BPX7 421 aa26.67■■□□□ 1.86
APOE-202ENST00000425718 CELF4Q9BZC1 486 aaKnown RBP26.67■■□□□ 1.86
APOE-202ENST00000425718 C2orf40Q9H1Z8 148 aa26.67■■□□□ 1.86
APOE-202ENST00000425718 SEL1LQ9UBV2 794 aa26.67■■□□□ 1.86
APOE-202ENST00000425718 MKI67P46013 3256 aaKnown RBP26.66■■□□□ 1.86
APOE-202ENST00000425718 NAMPTP43490 491 aa26.66■■□□□ 1.86
APOE-202ENST00000425718 GPC3P51654 580 aa26.66■■□□□ 1.86
APOE-202ENST00000425718 SMTNP53814 917 aa26.66■■□□□ 1.86
APOE-202ENST00000425718 LAMTOR4Q0VGL1 99 aa26.66■■□□□ 1.86
APOE-202ENST00000425718 MKRN4PQ13434 485 aaPredicted RBP26.66■■□□□ 1.86
APOE-202ENST00000425718 SNW1Q13573 536 aaKnown RBP26.66■■□□□ 1.86
APOE-202ENST00000425718 PCBP1Q15365 356 aaKnown RBP eCLIP26.66■■□□□ 1.861e-14■■■■■ 36.2
APOE-202ENST00000425718 ARSHQ5FYA8 562 aa26.66■■□□□ 1.86
APOE-202ENST00000425718 MAEAQ7L5Y9 396 aa26.66■■□□□ 1.86
APOE-202ENST00000425718 CCDC65Q8IXS2 484 aa26.66■■□□□ 1.86
APOE-202ENST00000425718 NLRP7Q8WX94 980 aa26.66■■□□□ 1.86
APOE-202ENST00000425718 NFKBIZQ9BYH8 718 aa26.66■■□□□ 1.86
APOE-202ENST00000425718 GCOM2Q9BZD3 368 aaPredicted RBP26.66■■□□□ 1.86
APOE-202ENST00000425718 PARVGQ9HBI0 331 aa26.66■■□□□ 1.86
APOE-202ENST00000425718 CDY2AQ9Y6F7 541 aa26.66■■□□□ 1.86
APOE-202ENST00000425718 MYMKA6NI61 221 aa26.65■■□□□ 1.86
APOE-202ENST00000425718 VTNP04004 478 aa26.65■■□□□ 1.86
APOE-202ENST00000425718 MCM4P33991 863 aa26.65■■□□□ 1.86
APOE-202ENST00000425718 PHKA2P46019 1235 aa26.65■■□□□ 1.86
APOE-202ENST00000425718 NLRP11P59045 1033 aaKnown RBP26.65■■□□□ 1.86
APOE-202ENST00000425718 GIT2Q14161 759 aa26.65■■□□□ 1.86
APOE-202ENST00000425718 ZNF618Q5T7W0 954 aa26.65■■□□□ 1.86
APOE-202ENST00000425718 ZBTB10Q96DT7 871 aa26.65■■□□□ 1.86
APOE-202ENST00000425718 PAGE5Q96GU1 130 aa26.65■■□□□ 1.86
APOE-202ENST00000425718 REEP2Q9BRK0 252 aa26.65■■□□□ 1.86
APOE-202ENST00000425718 TRIM9Q9C026 710 aa26.65■■□□□ 1.86
APOE-202ENST00000425718 PDE4DIPQ5VU43 2346 aa26.64■■□□□ 1.86
APOE-202ENST00000425718 GTPBP6O43824 516 aaPredicted RBP26.64■■□□□ 1.86
APOE-202ENST00000425718 PFKMP08237 780 aa26.64■■□□□ 1.86
APOE-202ENST00000425718 PLS3P13797 630 aa26.64■■□□□ 1.86
APOE-202ENST00000425718 ZNF131P52739 623 aa26.64■■□□□ 1.86
APOE-202ENST00000425718 MGAT3Q09327 533 aa26.64■■□□□ 1.86
APOE-202ENST00000425718 MFSD5Q6N075 450 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms