RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 DHX38Q92620 1227 aaKnown RBP13.02□□□□□ -0.33
PTPRN-204ENST00000423636 TEPSINQ96N21 525 aa13.02□□□□□ -0.33
PTPRN-204ENST00000423636 MRIQ9BWK5 157 aa13.02□□□□□ -0.33
PTPRN-204ENST00000423636 ADAM21Q9UKJ8 722 aa13.02□□□□□ -0.33
PTPRN-204ENST00000423636 NFU1Q9UMS0 254 aa13.02□□□□□ -0.33
PTPRN-204ENST00000423636 EMSYQ7Z589 1322 aa13.02□□□□□ -0.33
PTPRN-204ENST00000423636 IGSF9BQ9UPX0 1349 aa13.02□□□□□ -0.33
PTPRN-204ENST00000423636 A0A1W2PQJ5 194 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 FOXN3O00409 490 aaPredicted RBP13.01□□□□□ -0.33
PTPRN-204ENST00000423636 ITGA4P13612 1032 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 CARSP49589 748 aaKnown RBP13.01□□□□□ -0.33
PTPRN-204ENST00000423636 CNTN2Q02246 1040 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 GBP6Q6ZN66 633 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 HS2ST1Q7LGA3 356 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 CBWD2Q8IUF1 395 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 SLC5A5Q92911 643 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 GBP3Q9H0R5 595 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 GLT8D2Q9H1C3 349 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 JRKLQ9Y4A0 524 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 ZNF541Q9H0D2 1346 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 GRID2IPA4D2P6 1211 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 ANKRD63C9JTQ0 380 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 CIITAP33076 1130 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 NF2P35240 595 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 GGCXP38435 758 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 NT5C2P49902 561 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 PPP3CAQ08209 521 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 MKRN3Q13064 507 aaKnown RBP13.01□□□□□ -0.33
PTPRN-204ENST00000423636 ORC2Q13416 577 aaPredicted RBP13.01□□□□□ -0.33
PTPRN-204ENST00000423636 EPHA7Q15375 998 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 SWSAP1Q6NVH7 229 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 SEPT14Q6ZU15 432 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 HDXQ7Z353 690 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 DAAM2Q86T65 1068 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 CDR2LQ86X02 465 aaPredicted RBP13.01□□□□□ -0.33
PTPRN-204ENST00000423636 ARHGEF19Q8IW93 802 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 PLEKHO2Q8TD55 490 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 NACC1Q96RE7 527 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 FIZ1Q96SL8 496 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 EPB41L5Q9HCM4 733 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 RNF146Q9NTX7 359 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 TMOD4Q9NZQ9 345 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 YWHABP31946 246 aaKnown RBP13.01□□□□□ -0.33
PTPRN-204ENST00000423636 SLC18A3Q16572 532 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 PHLDB3Q6NSJ2 640 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 EPM2AIP1Q7L775 607 aaPredicted RBP13.01□□□□□ -0.33
PTPRN-204ENST00000423636 PPM1KQ8N3J5 372 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 ZNF526Q8TF50 670 aaPredicted RBP13.01□□□□□ -0.33
PTPRN-204ENST00000423636 CEP63Q96MT8 703 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 PAGR1Q9BTK6 254 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 DDX47Q9H0S4 455 aaKnown RBP13.01□□□□□ -0.33
PTPRN-204ENST00000423636 SIX2Q9NPC8 291 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 GABBR1Q9UBS5 961 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 FEM1BQ9UK73 627 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 FRMD4BQ9Y2L6 1034 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 NR2E1Q9Y466 385 aa13.01□□□□□ -0.33
PTPRN-204ENST00000423636 FRMD3A2A2Y4 597 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 DDX3XO00571 662 aaKnown RBP eCLIP13□□□□□ -0.33
PTPRN-204ENST00000423636 SELENOOQ9BVL4 669 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 CELF4Q9BZC1 486 aaKnown RBP13□□□□□ -0.33
PTPRN-204ENST00000423636 GGA3Q9NZ52 723 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 NAGPAQ9UK23 515 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 ERLIN1O75477 346 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 ICAM1P05362 532 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 PPP1R2P41236 205 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 MAPK7Q13164 816 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 ARHGAP27Q6ZUM4 889 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 SH2D3CQ8N5H7 860 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 SLC30A5Q8TAD4 765 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 ARHGEF26Q96DR7 871 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 PDXKO00764 312 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 DHX15O43143 795 aaKnown RBP13□□□□□ -0.33
PTPRN-204ENST00000423636 MARK3P27448 753 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 PSMC2P35998 433 aaKnown RBP13□□□□□ -0.33
PTPRN-204ENST00000423636 PTGER2P43116 358 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 FMO5P49326 533 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 BRD3Q15059 726 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 MTERF2Q49AM1 385 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 TSEN2Q8NCE0 465 aaKnown RBP13□□□□□ -0.33
PTPRN-204ENST00000423636 BSNDQ8WZ55 320 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 TMEM143Q96AN5 459 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 POLR3CQ9BUI4 534 aaPredicted RBP13□□□□□ -0.33
PTPRN-204ENST00000423636 FAM53CQ9NYF3 392 aa13□□□□□ -0.33
PTPRN-204ENST00000423636 RPL13P26373 211 aaKnown RBP12.99□□□□□ -0.33
PTPRN-204ENST00000423636 PAFAH1B1P43034 410 aa12.99□□□□□ -0.33
PTPRN-204ENST00000423636 RARRES1P49788 294 aa12.99□□□□□ -0.33
PTPRN-204ENST00000423636 HLTFQ14527 1009 aaKnown RBP eCLIP12.99□□□□□ -0.33
PTPRN-204ENST00000423636 PGM5Q15124 567 aa12.99□□□□□ -0.33
PTPRN-204ENST00000423636 FIGNQ5HY92 759 aa12.99□□□□□ -0.33
PTPRN-204ENST00000423636 C8orf74Q6P047 294 aa12.99□□□□□ -0.33
PTPRN-204ENST00000423636 MSANTD4Q8NCY6 345 aa12.99□□□□□ -0.33
PTPRN-204ENST00000423636 OR2W6PQ8NHA6 318 aa12.99□□□□□ -0.33
PTPRN-204ENST00000423636 UHMK1Q8TAS1 419 aaKnown RBP12.99□□□□□ -0.33
PTPRN-204ENST00000423636 LNX1Q8TBB1 728 aaPredicted RBP12.99□□□□□ -0.33
PTPRN-204ENST00000423636 CEP170P1Q96L14 293 aa12.99□□□□□ -0.33
PTPRN-204ENST00000423636 TRAF3IP3Q9Y228 551 aa12.99□□□□□ -0.33
PTPRN-204ENST00000423636 PITPNM2Q9BZ72 1349 aa12.99□□□□□ -0.33
PTPRN-204ENST00000423636 CSDE1O75534 798 aaKnown RBP12.99□□□□□ -0.33
PTPRN-204ENST00000423636 GALCP54803 685 aa12.99□□□□□ -0.33
PTPRN-204ENST00000423636 HAUS6Q7Z4H7 955 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms