RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 PRPF38AQ8NAV1 312 aaKnown RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 NCOA7Q8NI08 942 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 TBC1D16Q8TBP0 767 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 PHOSPHO2Q8TCD6 241 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 AMBRA1Q9C0C7 1298 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 CCDC86Q9H6F5 360 aaKnown RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 CA14Q9ULX7 337 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 HRNRQ86YZ3 2850 aaPredicted RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 FAM47DPA6NHR8 397 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 SMTNL1A8MU46 457 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 CHMP2AO43633 222 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 SLC28A2O43868 658 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 STX10O60499 249 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 DDAH1O94760 285 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 AGFG2O95081 481 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 NADKO95544 446 aaPredicted RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 RB1P06400 928 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 SRGNP10124 158 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 ABCG1P45844 678 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 MYO1EQ12965 1108 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 PDIA6Q15084 440 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 SLC9C2Q5TAH2 1124 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 IQSEC1Q6DN90 963 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 GLYCTKQ8IVS8 523 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 TXLNBQ8N3L3 684 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 TEX19Q8NA77 164 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 FAM98AQ8NCA5 519 aaKnown RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 RIN2Q8WYP3 895 aaPredicted RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 AGBL1Q96MI9 1066 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 TEKT3Q9BXF9 490 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 SMARCAD1Q9H4L7 1026 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 DDX19BQ9UMR2 479 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 RBBP6Q7Z6E9 1792 aaKnown RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 GOLGA8AA7E2F4 631 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 HMGB3O15347 200 aaKnown RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 MAGEB2O15479 319 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 PRPF40AO75400 957 aaKnown RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 FESP07332 822 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 ALOX5P09917 674 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 ARP10275 920 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 PDIA3P30101 505 aaKnown RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 ERVK-9P63128 1117 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 ERVK-24P63145 666 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 ARHGEF7Q14155 803 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 KRT32Q14532 448 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 MANEAQ5SRI9 462 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 TLK2Q86UE8 772 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 SPICE1Q8N0Z3 855 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 SPDYE1Q8NFV5 336 aaPredicted RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 GOT1L1Q8NHS2 421 aaPredicted RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 NETO1Q8TDF5 533 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 IPO4Q8TEX9 1081 aaKnown RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 SRRTQ9BXP5 876 aaKnown RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 CYP26B1Q9NR63 512 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 HESX1Q9UBX0 185 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 GPR75-ASB3A0A0A6YYF3 556 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 TMEM221A6NGB7 291 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 SPDYE2BA6NHP3 402 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 M0R296 226 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 CER1O95813 267 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 SPDYE6P0CI01 402 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 SMPD1P17405 629 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 VCLP18206 1134 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 HDLBPQ00341 1268 aaKnown RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 CCNG2Q16589 344 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 KYAT1Q16773 422 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 EOGTQ5NDL2 527 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 ESRP1Q6NXG1 681 aaKnown RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 ISLR2Q6UXK2 745 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 PIK3AP1Q6ZUJ8 805 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 SRGAP1Q7Z6B7 1085 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 AFAP1L1Q8TED9 768 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 ZNF830Q96NB3 372 aaPredicted RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 MMS19Q96T76 1030 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 KCNS3Q9BQ31 491 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 TRIM62Q9BVG3 475 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 GPR88Q9GZN0 384 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 CD209Q9NNX6 404 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 ZNF302Q9NR11 478 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 SIT1Q9Y3P8 196 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 ASB3Q9Y575 518 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.87□□□□□ -1.791e-13■■■□□ 15.3
TOP2A-201ENST00000423485 SPEF2Q9C093 1822 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 C4AP0C0L4 1744 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 BDP1A6H8Y1 2624 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 TBC1D4O60343 1298 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 GAS7O60861 476 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 GNL1P36915 607 aaPredicted RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 THOP1P52888 689 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 HERVK_113P62684 666 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 TNNC1P63316 161 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 WTAPQ15007 396 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 LRRC41Q15345 812 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 AKNAD1Q5T1N1 836 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 CAVIN1Q6NZI2 390 aaKnown RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 TAF2Q6P1X5 1199 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 CAPSLQ8WWF8 208 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 ZCCHC14Q8WYQ9 949 aaKnown RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 IRF7Q92985 503 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms