RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 FAM102BQ5T8I3 360 aa17.06■□□□□ 0.32
USB1-202ENST00000423271 PLA2G4FQ68DD2 849 aa17.06■□□□□ 0.32
USB1-202ENST00000423271 SLC24A5Q71RS6 500 aa17.06■□□□□ 0.32
USB1-202ENST00000423271 ANO5Q75V66 913 aa17.06■□□□□ 0.32
USB1-202ENST00000423271 FAM20AQ96MK3 541 aa17.06■□□□□ 0.32
USB1-202ENST00000423271 SCLT1Q96NL6 688 aa17.06■□□□□ 0.32
USB1-202ENST00000423271 PLVAPQ9BX97 442 aa17.06■□□□□ 0.32
USB1-202ENST00000423271 WRAP73Q9P2S5 460 aaPredicted RBP17.06■□□□□ 0.32
USB1-202ENST00000423271 IGKV6-21A0A0C4DH24 114 aa17.05■□□□□ 0.32
USB1-202ENST00000423271 TBKBP1A7MCY6 615 aa17.05■□□□□ 0.32
USB1-202ENST00000423271 CSDE1O75534 798 aaKnown RBP17.05■□□□□ 0.32
USB1-202ENST00000423271 ITGB1P05556 798 aa17.05■□□□□ 0.32
USB1-202ENST00000423271 FGFR1P11362 822 aa17.05■□□□□ 0.32
USB1-202ENST00000423271 EIF4BP23588 611 aaKnown RBP17.05■□□□□ 0.32
USB1-202ENST00000423271 DNAJB1P25685 340 aa17.05■□□□□ 0.32
USB1-202ENST00000423271 PSMC5P62195 406 aa17.05■□□□□ 0.32
USB1-202ENST00000423271 CAMK1Q14012 370 aa17.05■□□□□ 0.32
USB1-202ENST00000423271 LMAN2LQ9H0V9 348 aa17.05■□□□□ 0.32
USB1-202ENST00000423271 PLAGL2Q9UPG8 496 aa17.05■□□□□ 0.32
USB1-202ENST00000423271 PLXNA4Q9HCM2 1894 aa17.04■□□□□ 0.32
USB1-202ENST00000423271 H3BQ06 376 aaPredicted RBP17.04■□□□□ 0.32
USB1-202ENST00000423271 WNT7AO00755 349 aa17.04■□□□□ 0.32
USB1-202ENST00000423271 MMP1P03956 469 aa17.04■□□□□ 0.32
USB1-202ENST00000423271 DARSP14868 501 aaKnown RBP17.04■□□□□ 0.32
USB1-202ENST00000423271 FAM189BP81408 668 aa17.04■□□□□ 0.32
USB1-202ENST00000423271 RABEP1Q15276 862 aa17.04■□□□□ 0.32
USB1-202ENST00000423271 LEXMQ3ZCV2 418 aa17.04■□□□□ 0.32
USB1-202ENST00000423271 FAM43BQ6ZT52 329 aaPredicted RBP17.04■□□□□ 0.32
USB1-202ENST00000423271 ZNF579Q8NAF0 562 aaKnown RBP17.04■□□□□ 0.32
USB1-202ENST00000423271 KLHL23Q8NBE8 558 aa17.04■□□□□ 0.32
USB1-202ENST00000423271 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.04■□□□□ 0.32
USB1-202ENST00000423271 NLRP7Q8WX94 980 aa17.04■□□□□ 0.32
USB1-202ENST00000423271 P2RX5Q93086 422 aa17.04■□□□□ 0.32
USB1-202ENST00000423271 NAP1L4Q99733 375 aaKnown RBP17.04■□□□□ 0.32
USB1-202ENST00000423271 BRMS1Q9HCU9 246 aa17.04■□□□□ 0.32
USB1-202ENST00000423271 RNF19AQ9NV58 838 aa17.04■□□□□ 0.32
USB1-202ENST00000423271 TMEM161AQ9NX61 479 aa17.04■□□□□ 0.32
USB1-202ENST00000423271 BTBD18B2RXH4 712 aa17.03■□□□□ 0.32
USB1-202ENST00000423271 TBX3O15119 743 aa17.03■□□□□ 0.32
USB1-202ENST00000423271 MARCH6O60337 910 aa17.03■□□□□ 0.32
USB1-202ENST00000423271 MAFO75444 373 aaPredicted RBP17.03■□□□□ 0.32
USB1-202ENST00000423271 QARSP47897 775 aaKnown RBP17.03■□□□□ 0.32
USB1-202ENST00000423271 NPEPPSP55786 919 aa17.03■□□□□ 0.32
USB1-202ENST00000423271 SPIRE1Q08AE8 756 aa17.03■□□□□ 0.32
USB1-202ENST00000423271 HYAL1Q12794 435 aa17.03■□□□□ 0.32
USB1-202ENST00000423271 COL19A1Q14993 1142 aa17.03■□□□□ 0.32
USB1-202ENST00000423271 NCAPH2Q6IBW4 605 aa17.03■□□□□ 0.32
USB1-202ENST00000423271 EP400NLQ6ZTU2 488 aa17.03■□□□□ 0.32
USB1-202ENST00000423271 DIS3L2Q8IYB7 885 aaKnown RBP17.03■□□□□ 0.32
USB1-202ENST00000423271 ZNF710Q8N1W2 664 aa17.03■□□□□ 0.32
USB1-202ENST00000423271 SPPL3Q8TCT6 385 aa17.03■□□□□ 0.32
USB1-202ENST00000423271 NEK9Q8TD19 979 aa17.03■□□□□ 0.32
USB1-202ENST00000423271 PABPC5Q96DU9 382 aaKnown RBP17.03■□□□□ 0.32
USB1-202ENST00000423271 LXNQ9BS40 222 aa17.03■□□□□ 0.32
USB1-202ENST00000423271 ATP6V0A4Q9HBG4 840 aa17.03■□□□□ 0.32
USB1-202ENST00000423271 A0A087WZ62 844 aa17.02■□□□□ 0.32
USB1-202ENST00000423271 P4HBP07237 508 aaKnown RBP17.02■□□□□ 0.32
USB1-202ENST00000423271 IL9P15248 144 aa17.02■□□□□ 0.32
USB1-202ENST00000423271 GTF2F1P35269 517 aaKnown RBP eCLIP17.02■□□□□ 0.32
USB1-202ENST00000423271 IRS1P35568 1242 aa17.02■□□□□ 0.32
USB1-202ENST00000423271 EPHA7Q15375 998 aa17.02■□□□□ 0.32
USB1-202ENST00000423271 KSR1Q8IVT5 923 aa17.02■□□□□ 0.32
USB1-202ENST00000423271 CCDC83Q8IWF9 413 aa17.02■□□□□ 0.32
USB1-202ENST00000423271 FDXACB1Q9BRP7 624 aaPredicted RBP17.02■□□□□ 0.32
USB1-202ENST00000423271 ELAC1Q9H777 363 aaKnown RBP17.02■□□□□ 0.32
USB1-202ENST00000423271 CYP26B1Q9NR63 512 aa17.02■□□□□ 0.32
USB1-202ENST00000423271 CLDND1Q9NY35 253 aa17.02■□□□□ 0.32
USB1-202ENST00000423271 RGL1Q9NZL6 768 aa17.02■□□□□ 0.32
USB1-202ENST00000423271 SUCLA2Q9P2R7 463 aaPredicted RBP17.02■□□□□ 0.32
USB1-202ENST00000423271 ARID2Q68CP9 1835 aa17.02■□□□□ 0.31
USB1-202ENST00000423271 ZSCAN20P17040 1043 aaPredicted RBP17.01■□□□□ 0.31
USB1-202ENST00000423271 LTBRP36941 435 aa17.01■□□□□ 0.31
USB1-202ENST00000423271 DNM2P50570 870 aa17.01■□□□□ 0.31
USB1-202ENST00000423271 GUCY1B3Q02153 619 aa17.01■□□□□ 0.31
USB1-202ENST00000423271 CYP4A11Q02928 519 aa17.01■□□□□ 0.31
USB1-202ENST00000423271 NAALADL2Q58DX5 795 aa17.01■□□□□ 0.31
USB1-202ENST00000423271 SPOUT1Q5T280 376 aaKnown RBP17.01■□□□□ 0.31
USB1-202ENST00000423271 PTCRAQ6ISU1 281 aaPredicted RBP17.01■□□□□ 0.31
USB1-202ENST00000423271 ECHDC2Q86YB7 292 aa17.01■□□□□ 0.31
USB1-202ENST00000423271 RHPN2Q8IUC4 686 aa17.01■□□□□ 0.31
USB1-202ENST00000423271 SLFN12Q8IYM2 578 aa17.01■□□□□ 0.31
USB1-202ENST00000423271 RNF169Q8NCN4 708 aa17.01■□□□□ 0.31
USB1-202ENST00000423271 POF1BQ8WVV4 589 aa17.01■□□□□ 0.31
USB1-202ENST00000423271 DYDC2Q96IM9 177 aa17.01■□□□□ 0.31
USB1-202ENST00000423271 GCOM2Q9BZD3 368 aaPredicted RBP17.01■□□□□ 0.31
USB1-202ENST00000423271 CWH43Q9H720 699 aa17.01■□□□□ 0.31
USB1-202ENST00000423271 BMP2KQ9NSY1 1161 aaPredicted RBP17.01■□□□□ 0.31
USB1-202ENST00000423271 TYW1Q9NV66 732 aaKnown RBP17.01■□□□□ 0.31
USB1-202ENST00000423271 RNF216Q9NWF9 866 aaPredicted RBP17.01■□□□□ 0.31
USB1-202ENST00000423271 PCDHGC5Q9Y5F6 944 aa17.01■□□□□ 0.31
USB1-202ENST00000423271 LINC01565O15544 149 aa17■□□□□ 0.31
USB1-202ENST00000423271 ATF7P17544 494 aaPredicted RBP17■□□□□ 0.31
USB1-202ENST00000423271 DLX2Q07687 328 aaPredicted RBP17■□□□□ 0.31
USB1-202ENST00000423271 TRIM29Q14134 588 aa17■□□□□ 0.31
USB1-202ENST00000423271 CTTNQ14247 550 aaKnown RBP17■□□□□ 0.31
USB1-202ENST00000423271 CTC1Q2NKJ3 1217 aa17■□□□□ 0.31
USB1-202ENST00000423271 LRRC55Q6ZSA7 311 aa17■□□□□ 0.31
USB1-202ENST00000423271 ADGRD2Q7Z7M1 963 aa17■□□□□ 0.31
USB1-202ENST00000423271 COLGALT1Q8NBJ5 622 aa17■□□□□ 0.31
USB1-202ENST00000423271 CEP170P1Q96L14 293 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms