RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 ZNF844Q08AG5 666 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 CUL1Q13616 776 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 PTGISQ16647 500 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 KIAA1755Q5JYT7 1200 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 FBXW10Q5XX13 1052 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 CCDC174Q6PII3 467 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 C1orf186Q6ZWK4 172 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 ARHGEF26Q96DR7 871 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 HES6Q96HZ4 224 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 GPR88Q9GZN0 384 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 SLX4Q8IY92 1834 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 GOLGA6L10A6NI86 522 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 HMGB1P1B2RPK0 211 aaPredicted RBP17.17■□□□□ 0.34
CDH1-202ENST00000422392 FERP16591 822 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 HDLBPQ00341 1268 aaKnown RBP17.17■□□□□ 0.34
CDH1-202ENST00000422392 ZNF211Q13398 564 aaPredicted RBP17.17■□□□□ 0.34
CDH1-202ENST00000422392 SLC30A5Q8TAD4 765 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 ZNF622Q969S3 477 aaKnown RBP eCLIP17.17■□□□□ 0.34
CDH1-202ENST00000422392 CALR3Q96L12 384 aaKnown RBP17.17■□□□□ 0.34
CDH1-202ENST00000422392 FIZ1Q96SL8 496 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 SUCLA2Q9P2R7 463 aaPredicted RBP17.17■□□□□ 0.34
CDH1-202ENST00000422392 RBBP6Q7Z6E9 1792 aaKnown RBP17.17■□□□□ 0.34
CDH1-202ENST00000422392 DCDC2CA8MYV0 355 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 E7EVH7 732 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 GCOM1H8Y6P7 765 aaPredicted RBP17.17■□□□□ 0.34
CDH1-202ENST00000422392 MYO1FO00160 1098 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 TULP1O00294 542 aaPredicted RBP17.17■□□□□ 0.34
CDH1-202ENST00000422392 BACH1O14867 736 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 MYZAPP0CAP1 466 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 TMOD1P28289 359 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 MMP14P50281 582 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 MAEAQ7L5Y9 396 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 RASGEF1CQ8N431 466 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 GMCL1P1Q8NEA9 526 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 GMCL1Q96IK5 515 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 PARVGQ9HBI0 331 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.17■□□□□ 0.34
CDH1-202ENST00000422392 AMFRQ9UKV5 643 aa17.17■□□□□ 0.34
CDH1-202ENST00000422392 COL11A2P13942 1736 aaPredicted RBP17.16■□□□□ 0.34
CDH1-202ENST00000422392 NPR1P16066 1061 aa17.16■□□□□ 0.34
CDH1-202ENST00000422392 INPP5BP32019 993 aa17.16■□□□□ 0.34
CDH1-202ENST00000422392 AADACL2Q6P093 401 aa17.16■□□□□ 0.34
CDH1-202ENST00000422392 FAM178BQ8IXR5 827 aa17.16■□□□□ 0.34
CDH1-202ENST00000422392 ZNF473Q8WTR7 871 aaKnown RBP17.16■□□□□ 0.34
CDH1-202ENST00000422392 LMBR1Q8WVP7 490 aa17.16■□□□□ 0.34
CDH1-202ENST00000422392 CCT8L2Q96SF2 557 aa17.16■□□□□ 0.34
CDH1-202ENST00000422392 IDI2Q9BXS1 227 aa17.16■□□□□ 0.34
CDH1-202ENST00000422392 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.16■□□□□ 0.34
CDH1-202ENST00000422392 CHORDC1Q9UHD1 332 aaPredicted RBP17.16■□□□□ 0.34
CDH1-202ENST00000422392 GTPBP10A4D1E9 387 aaKnown RBP17.16■□□□□ 0.34
CDH1-202ENST00000422392 TISP43B9A030 160 aa17.16■□□□□ 0.34
CDH1-202ENST00000422392 NLRP14Q86W24 1093 aa17.16■□□□□ 0.34
CDH1-202ENST00000422392 THAP2Q9H0W7 228 aa17.16■□□□□ 0.34
CDH1-202ENST00000422392 ERVK-5Q9HDB9 667 aa17.16■□□□□ 0.34
CDH1-202ENST00000422392 A0A0A6YYK5 440 aaPredicted RBP17.15■□□□□ 0.34
CDH1-202ENST00000422392 PSMD10O75832 226 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 GAP43P17677 238 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 DACT2Q5SW24 774 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 ZNF720Q7Z2F6 126 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 PODNQ7Z5L7 613 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 SYCE1Q8N0S2 351 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 MYCBPAPQ8TBZ2 947 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 LRRC45Q96CN5 670 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 HOOK2Q96ED9 719 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 UTRNP46939 3433 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 BHMG1C9JSJ3 638 aaPredicted RBP17.15■□□□□ 0.34
CDH1-202ENST00000422392 CCDC188H7C350 402 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 PPP1R12BO60237 982 aaPredicted RBP17.15■□□□□ 0.34
CDH1-202ENST00000422392 CPP00450 1065 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 DHX9Q08211 1270 aaKnown RBP17.15■□□□□ 0.34
CDH1-202ENST00000422392 ODR4Q5SWX8 454 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 ACER1Q8TDN7 264 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 STK33Q9BYT3 514 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 INTS2Q9H0H0 1204 aaKnown RBP17.15■□□□□ 0.34
CDH1-202ENST00000422392 AGPAT3Q9NRZ7 376 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 TMOD4Q9NZQ9 345 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 PKD2L1Q9P0L9 805 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 COG5Q9UP83 839 aa17.15■□□□□ 0.34
CDH1-202ENST00000422392 DDX39AO00148 427 aaKnown RBP17.14■□□□□ 0.33
CDH1-202ENST00000422392 EIF3DO15371 548 aaKnown RBP eCLIP17.14■□□□□ 0.33
CDH1-202ENST00000422392 DDX3YO15523 660 aaKnown RBP17.14■□□□□ 0.33
CDH1-202ENST00000422392 ECE2O60344 883 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 CYP3A4P08684 503 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 DLG4P78352 724 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 ODF2Q5BJF6 829 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 RBM26Q5T8P6 1007 aaKnown RBP17.14■□□□□ 0.33
CDH1-202ENST00000422392 MEX3CQ5U5Q3 659 aaKnown RBP17.14■□□□□ 0.33
CDH1-202ENST00000422392 EMC10Q5UCC4 262 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 PHLDB3Q6NSJ2 640 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 TMC3Q7Z5M5 1100 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 CTNNBL1Q8WYA6 563 aaPredicted RBP17.14■□□□□ 0.33
CDH1-202ENST00000422392 RFFLQ8WZ73 363 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 CSRNP1Q96S65 589 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 CNOT8Q9UFF9 292 aaKnown RBP17.14■□□□□ 0.33
CDH1-202ENST00000422392 A6NNZ2 444 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 GAS7O60861 476 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 ARP10275 920 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 ZYXQ15942 572 aaKnown RBP17.14■□□□□ 0.33
CDH1-202ENST00000422392 TUBB8Q3ZCM7 444 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 TRMT1LQ7Z2T5 733 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms