RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 EVPLQ92817 2033 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 ARVCFO00192 962 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 TREHO43280 583 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 GAS2O43903 313 aaKnown RBP13.83□□□□□ -0.2
TMEM53-206ENST00000420706 TBCAO75347 108 aaKnown RBP13.83□□□□□ -0.2
TMEM53-206ENST00000420706 RHOBTB3O94955 611 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 CYP2C9P11712 490 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 CDK7P50613 346 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 RTP1P59025 263 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 COASYQ13057 564 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 ZSCAN23Q3MJ62 389 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 HERC4Q5GLZ8 1057 aaPredicted RBP13.83□□□□□ -0.2
TMEM53-206ENST00000420706 FAM47CQ5HY64 1035 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 ISM2Q6H9L7 571 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 GDF6Q6KF10 455 aaPredicted RBP13.83□□□□□ -0.2
TMEM53-206ENST00000420706 LRRC71Q8N4P6 559 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 MYCT1Q8N699 235 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 METTL13Q8N6R0 699 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 TCP11Q8WWU5 503 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 KIFAP3Q92845 792 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 CCDC47Q96A33 483 aaKnown RBP13.83□□□□□ -0.2
TMEM53-206ENST00000420706 DRC1Q96MC2 740 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 SEZ6LQ9BYH1 1024 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 SENP6Q9GZR1 1112 aaPredicted RBP13.83□□□□□ -0.2
TMEM53-206ENST00000420706 POLR3FQ9H1D9 316 aaPredicted RBP13.83□□□□□ -0.2
TMEM53-206ENST00000420706 ZHX3Q9H4I2 956 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 COL4A3BPQ9Y5P4 624 aa13.83□□□□□ -0.2
TMEM53-206ENST00000420706 SMIM35A0A1B0GVV1 85 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 SYCE3A1L190 88 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 BIN1O00499 593 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 COL6A1P12109 1028 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 PLS3P13797 630 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 GAP43P17677 238 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 TMOD1P28289 359 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 DNM2P50570 870 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 CLCN3P51790 818 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 PSMD2Q13200 908 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 MORC3Q14149 939 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 KIAA0319LQ8IZA0 1049 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 ASAP3Q8TDY4 903 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 BSNDQ8WZ55 320 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 GZF1Q9H116 711 aaPredicted RBP13.82□□□□□ -0.2
TMEM53-206ENST00000420706 C17orf75Q9HAS0 396 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 PARVGQ9HBI0 331 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 RMND1Q9NWS8 449 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 SUCLA2Q9P2R7 463 aaPredicted RBP13.82□□□□□ -0.2
TMEM53-206ENST00000420706 MYH11P35749 1972 aa13.82□□□□□ -0.2
TMEM53-206ENST00000420706 ASAP2O43150 1006 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 BMP6P22004 513 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 GLRA2P23416 452 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 STK4Q13043 487 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 SASS6Q6UVJ0 657 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 SLC39A5Q6ZMH5 540 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 RUFY4Q6ZNE9 571 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 SFR1Q86XK3 245 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 TRIML1Q8N9V2 468 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 DIS3LQ8TF46 1054 aaKnown RBP13.81□□□□□ -0.2
TMEM53-206ENST00000420706 PRPF31Q8WWY3 499 aaKnown RBP13.81□□□□□ -0.2
TMEM53-206ENST00000420706 HPS3Q969F9 1004 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 CTAGE1Q96RT6 745 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 FIZ1Q96SL8 496 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 NTPCRQ9BSD7 190 aaKnown RBP13.81□□□□□ -0.2
TMEM53-206ENST00000420706 EXOC1Q9NV70 894 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 TBC1D7Q9P0N9 293 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 LARSQ9P2J5 1176 aaKnown RBP13.81□□□□□ -0.2
TMEM53-206ENST00000420706 SEL1LQ9UBV2 794 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 KCNG1Q9UIX4 513 aa13.81□□□□□ -0.2
TMEM53-206ENST00000420706 MAPTP10636 758 aaKnown RBP13.8□□□□□ -0.2
TMEM53-206ENST00000420706 PEX3P56589 373 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 NLRP12P59046 1061 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 LAMTOR4Q0VGL1 99 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 MXD4Q14582 209 aaPredicted RBP13.8□□□□□ -0.2
TMEM53-206ENST00000420706 PTGISQ16647 500 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 FAM26FQ5R3K3 315 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 ODR4Q5SWX8 454 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 ZNF658Q5TYW1 1059 aaPredicted RBP13.8□□□□□ -0.2
TMEM53-206ENST00000420706 ZNF720Q7Z2F6 126 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 RHPN2Q8IUC4 686 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 NME8Q8N427 588 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 DNAJB3Q8WWF6 145 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 SPIRE2Q8WWL2 714 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 PSPC1Q8WXF1 523 aaKnown RBP13.8□□□□□ -0.2
TMEM53-206ENST00000420706 PAWRQ96IZ0 340 aaKnown RBP13.8□□□□□ -0.2
TMEM53-206ENST00000420706 IFT74Q96LB3 600 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 FUCA2Q9BTY2 467 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 FAM49AQ9H0Q0 323 aaPredicted RBP13.8□□□□□ -0.2
TMEM53-206ENST00000420706 C11orf49Q9H6J7 331 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 SLC39A2Q9NP94 309 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 OLFML3Q9NRN5 406 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 TRMT13Q9NUP7 481 aaKnown RBP13.8□□□□□ -0.2
TMEM53-206ENST00000420706 GDAQ9Y2T3 454 aa13.8□□□□□ -0.2
TMEM53-206ENST00000420706 EN2P19622 333 aaPredicted RBP13.79□□□□□ -0.2
TMEM53-206ENST00000420706 NMT1P30419 496 aaKnown RBP13.79□□□□□ -0.2
TMEM53-206ENST00000420706 NAMPTP43490 491 aa13.79□□□□□ -0.2
TMEM53-206ENST00000420706 NPTX2P47972 431 aa13.79□□□□□ -0.2
TMEM53-206ENST00000420706 SMTNP53814 917 aa13.79□□□□□ -0.2
TMEM53-206ENST00000420706 ATN1P54259 1190 aaPredicted RBP13.79□□□□□ -0.2
TMEM53-206ENST00000420706 NCKAP1LP55160 1127 aa13.79□□□□□ -0.2
TMEM53-206ENST00000420706 DMP1Q13316 513 aaPredicted RBP13.79□□□□□ -0.2
TMEM53-206ENST00000420706 PPP2R5AQ15172 486 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms