RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 HNRNPUQ00839 825 aaKnown RBP eCLIP4.66□□□□□ -1.66
CNGA1-203ENST00000420489 DNM1Q05193 864 aaKnown RBP4.66□□□□□ -1.66
CNGA1-203ENST00000420489 ITGA7Q13683 1181 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 DUOXA2Q1HG44 320 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 GPR155Q7Z3F1 870 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 WDR5BQ86VZ2 330 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 SART1O43290 800 aaKnown RBP4.66□□□□□ -1.66
CNGA1-203ENST00000420489 CLSTN1O94985 981 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 PCCAP05165 728 aaPredicted RBP4.66□□□□□ -1.66
CNGA1-203ENST00000420489 GLB1P16278 677 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 GRIK1P39086 918 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 BACE1P56817 501 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 ATP11AP98196 1134 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 NFE2L2Q16236 605 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 ACAD11Q709F0 780 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 CCDC82Q8N4S0 544 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 APBB2Q92870 758 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 LRIG1Q96JA1 1093 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 C17orf80Q9BSJ5 609 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 PORCNQ9H237 461 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 EPS15L1Q9UBC2 864 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 FBXL21Q9UKT6 434 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 OTOGLQ3ZCN5 2332 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 ZFHX4Q86UP3 3567 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 RBM5P52756 815 aaKnown RBP eCLIP4.66□□□□□ -1.66
CNGA1-203ENST00000420489 MLLT6P55198 1093 aaPredicted RBP4.66□□□□□ -1.66
CNGA1-203ENST00000420489 AAMPQ13685 434 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 ZNF792Q3KQV3 632 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 COPS6Q7L5N1 327 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 PIP4P1Q86T03 277 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 MSANTD3Q96H12 275 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 ZC3H10Q96K80 434 aaKnown RBP4.66□□□□□ -1.66
CNGA1-203ENST00000420489 NAP1L5Q96NT1 182 aaPredicted RBP4.66□□□□□ -1.66
CNGA1-203ENST00000420489 CITED4Q96RK1 184 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 MYADMQ96S97 322 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 LACRTQ9GZZ8 138 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 ALDH8A1Q9H2A2 487 aaPredicted RBP4.66□□□□□ -1.66
CNGA1-203ENST00000420489 TXNRD2Q9NNW7 524 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 USP40Q9NVE5 1235 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 TMEM63CQ9P1W3 806 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 CHPF2Q9P2E5 772 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 STOML1Q9UBI4 398 aa4.66□□□□□ -1.66
CNGA1-203ENST00000420489 PRUNE2Q8WUY3 3088 aa4.65□□□□□ -1.66
CNGA1-203ENST00000420489 C2CD4DB7Z1M9 353 aa4.65□□□□□ -1.66
CNGA1-203ENST00000420489 ZBTB39O15060 712 aa4.65□□□□□ -1.66
CNGA1-203ENST00000420489 BMP3P12645 472 aa4.65□□□□□ -1.66
CNGA1-203ENST00000420489 MCAMP43121 646 aa4.65□□□□□ -1.66
CNGA1-203ENST00000420489 USP14P54578 494 aa4.65□□□□□ -1.66
CNGA1-203ENST00000420489 C8orf34Q49A92 452 aa4.65□□□□□ -1.66
CNGA1-203ENST00000420489 FAM26DQ5JW98 314 aa4.65□□□□□ -1.66
CNGA1-203ENST00000420489 LONP2Q86WA8 852 aa4.65□□□□□ -1.66
CNGA1-203ENST00000420489 CLEC10AQ8IUN9 316 aa4.65□□□□□ -1.66
CNGA1-203ENST00000420489 BSNDQ8WZ55 320 aa4.65□□□□□ -1.66
CNGA1-203ENST00000420489 FAM46AQ96IP4 442 aaKnown RBP4.65□□□□□ -1.66
CNGA1-203ENST00000420489 EVLQ9UI08 416 aaPredicted RBP4.65□□□□□ -1.66
CNGA1-203ENST00000420489 PHTF1Q9UMS5 762 aa4.65□□□□□ -1.66
CNGA1-203ENST00000420489 TTF2Q9UNY4 1162 aaKnown RBP4.65□□□□□ -1.66
CNGA1-203ENST00000420489 LAMA2P24043 3122 aaKnown RBP4.65□□□□□ -1.67
CNGA1-203ENST00000420489 IRS4O14654 1257 aaPredicted RBP4.65□□□□□ -1.67
CNGA1-203ENST00000420489 HYAL3O43820 417 aaPredicted RBP4.65□□□□□ -1.67
CNGA1-203ENST00000420489 GLP2RO95838 553 aa4.65□□□□□ -1.67
CNGA1-203ENST00000420489 MPSTP25325 297 aa4.65□□□□□ -1.67
CNGA1-203ENST00000420489 RAP1GAPP47736 663 aa4.65□□□□□ -1.67
CNGA1-203ENST00000420489 CPSF6Q16630 551 aaKnown RBP eCLIP4.65□□□□□ -1.67
CNGA1-203ENST00000420489 CES5AQ6NT32 575 aa4.65□□□□□ -1.67
CNGA1-203ENST00000420489 CAPN12Q6ZSI9 719 aa4.65□□□□□ -1.67
CNGA1-203ENST00000420489 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.65□□□□□ -1.67
CNGA1-203ENST00000420489 PLBD2Q8NHP8 589 aa4.65□□□□□ -1.67
CNGA1-203ENST00000420489 SEMA3CQ99985 751 aa4.65□□□□□ -1.67
CNGA1-203ENST00000420489 CNTN3Q9P232 1028 aa4.65□□□□□ -1.67
CNGA1-203ENST00000420489 CNPY2Q9Y2B0 182 aa4.65□□□□□ -1.67
CNGA1-203ENST00000420489 MAN2B2Q9Y2E5 1009 aa4.65□□□□□ -1.67
CNGA1-203ENST00000420489 TICRRQ7Z2Z1 1910 aa4.65□□□□□ -1.67
CNGA1-203ENST00000420489 B4GALT4O60513 344 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 COBLO75128 1261 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 ADORA2AP29274 412 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 CCR3P51677 355 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 CSTF1Q05048 431 aaKnown RBP4.64□□□□□ -1.67
CNGA1-203ENST00000420489 C1orf127Q8N9H9 656 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 YIPF2Q9BWQ6 316 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 BHLHE41Q9C0J9 482 aaPredicted RBP4.64□□□□□ -1.67
CNGA1-203ENST00000420489 SOX13Q9UN79 622 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 POLIQ9UNA4 740 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 MRPS17Q9Y2R5 130 aaKnown RBP4.64□□□□□ -1.67
CNGA1-203ENST00000420489 ANKRD11Q6UB99 2663 aaPredicted RBP4.64□□□□□ -1.67
CNGA1-203ENST00000420489 NAV2Q8IVL1 2488 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 CTAGE5O15320 804 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 B4GALT3O60512 393 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 SIX3O95343 332 aaPredicted RBP4.64□□□□□ -1.67
CNGA1-203ENST00000420489 RNF43Q68DV7 783 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 APOBEC3HQ6NTF7 200 aaKnown RBP4.64□□□□□ -1.67
CNGA1-203ENST00000420489 XRRA1Q6P2D8 792 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 C1orf228Q6PIY5 440 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 ATG14Q6ZNE5 492 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 CMTR2Q8IYT2 770 aaKnown RBP4.64□□□□□ -1.67
CNGA1-203ENST00000420489 FIBCD1Q8N539 461 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 RIN2Q8WYP3 895 aaPredicted RBP4.64□□□□□ -1.67
CNGA1-203ENST00000420489 RUSC1Q9BVN2 902 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 PLA2G12BQ9BX93 195 aa4.64□□□□□ -1.67
CNGA1-203ENST00000420489 ZNF768Q9H5H4 540 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms