RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 LEXMQ3ZCV2 418 aa12.42□□□□□ -0.42
SSBP3-206ENST00000420121 MTERF2Q49AM1 385 aa12.42□□□□□ -0.42
SSBP3-206ENST00000420121 FAM102BQ5T8I3 360 aa12.42□□□□□ -0.42
SSBP3-206ENST00000420121 SLC24A5Q71RS6 500 aa12.42□□□□□ -0.42
SSBP3-206ENST00000420121 SPDYE1Q8NFV5 336 aaPredicted RBP12.42□□□□□ -0.42
SSBP3-206ENST00000420121 NEK9Q8TD19 979 aa12.42□□□□□ -0.42
SSBP3-206ENST00000420121 P2RX5Q93086 422 aa12.42□□□□□ -0.42
SSBP3-206ENST00000420121 FAM20AQ96MK3 541 aa12.42□□□□□ -0.42
SSBP3-206ENST00000420121 MAP7D2Q96T17 732 aa12.42□□□□□ -0.42
SSBP3-206ENST00000420121 C11orf84Q9BUA3 381 aaPredicted RBP12.42□□□□□ -0.42
SSBP3-206ENST00000420121 PLVAPQ9BX97 442 aa12.42□□□□□ -0.42
SSBP3-206ENST00000420121 LMAN2LQ9H0V9 348 aa12.42□□□□□ -0.42
SSBP3-206ENST00000420121 NSUN3Q9H649 340 aaKnown RBP12.42□□□□□ -0.42
SSBP3-206ENST00000420121 ALG13Q9NP73 1137 aaKnown RBP12.42□□□□□ -0.42
SSBP3-206ENST00000420121 C1orf112Q9NSG2 853 aa12.42□□□□□ -0.42
SSBP3-206ENST00000420121 SEPT9Q9UHD8 586 aaPredicted RBP12.42□□□□□ -0.42
SSBP3-206ENST00000420121 PLAGL2Q9UPG8 496 aa12.42□□□□□ -0.42
SSBP3-206ENST00000420121 AKT3Q9Y243 479 aa12.42□□□□□ -0.42
SSBP3-206ENST00000420121 DENND3A2RUS2 1198 aa12.41□□□□□ -0.42
SSBP3-206ENST00000420121 TBX3O15119 743 aa12.41□□□□□ -0.42
SSBP3-206ENST00000420121 CCNT1O60563 726 aaKnown RBP12.41□□□□□ -0.42
SSBP3-206ENST00000420121 MMP1P03956 469 aa12.41□□□□□ -0.42
SSBP3-206ENST00000420121 DARSP14868 501 aaKnown RBP12.41□□□□□ -0.42
SSBP3-206ENST00000420121 XBP1P17861 261 aa12.41□□□□□ -0.42
SSBP3-206ENST00000420121 KCNA5P22460 613 aa12.41□□□□□ -0.42
SSBP3-206ENST00000420121 EIF4BP23588 611 aaKnown RBP12.41□□□□□ -0.42
SSBP3-206ENST00000420121 TMOD1P28289 359 aa12.41□□□□□ -0.42
SSBP3-206ENST00000420121 LTBRP36941 435 aa12.41□□□□□ -0.42
SSBP3-206ENST00000420121 TBC1D8BQ0IIM8 1120 aa12.41□□□□□ -0.42
SSBP3-206ENST00000420121 CTC1Q2NKJ3 1217 aa12.41□□□□□ -0.42
SSBP3-206ENST00000420121 ODR4Q5SWX8 454 aa12.41□□□□□ -0.42
SSBP3-206ENST00000420121 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
SSBP3-206ENST00000420121 IL27Q8NEV9 243 aa12.41□□□□□ -0.42
SSBP3-206ENST00000420121 SPPL3Q8TCT6 385 aa12.41□□□□□ -0.42
SSBP3-206ENST00000420121 PABPC5Q96DU9 382 aaKnown RBP12.41□□□□□ -0.42
SSBP3-206ENST00000420121 KIF2CQ99661 725 aa12.41□□□□□ -0.42
SSBP3-206ENST00000420121 ELAC1Q9H777 363 aaKnown RBP12.41□□□□□ -0.42
SSBP3-206ENST00000420121 CD320Q9NPF0 282 aa12.41□□□□□ -0.42
SSBP3-206ENST00000420121 TMEM161AQ9NX61 479 aa12.41□□□□□ -0.42
SSBP3-206ENST00000420121 BTBD18B2RXH4 712 aa12.4□□□□□ -0.42
SSBP3-206ENST00000420121 MAFO75444 373 aaPredicted RBP12.4□□□□□ -0.42
SSBP3-206ENST00000420121 CSDE1O75534 798 aaKnown RBP12.4□□□□□ -0.42
SSBP3-206ENST00000420121 FGFR1P11362 822 aa12.4□□□□□ -0.42
SSBP3-206ENST00000420121 ATF7P17544 494 aaPredicted RBP12.4□□□□□ -0.42
SSBP3-206ENST00000420121 IBSPP21815 317 aaPredicted RBP12.4□□□□□ -0.42
SSBP3-206ENST00000420121 FGFR4P22455 802 aa12.4□□□□□ -0.42
SSBP3-206ENST00000420121 GTF2F1P35269 517 aaKnown RBP eCLIP12.4□□□□□ -0.42
SSBP3-206ENST00000420121 IRS1P35568 1242 aa12.4□□□□□ -0.42
SSBP3-206ENST00000420121 KRT2P35908 639 aa12.4□□□□□ -0.42
SSBP3-206ENST00000420121 PSMC5P62195 406 aa12.4□□□□□ -0.42
SSBP3-206ENST00000420121 HYAL1Q12794 435 aa12.4□□□□□ -0.42
SSBP3-206ENST00000420121 C8orf34Q49A92 452 aa12.4□□□□□ -0.42
SSBP3-206ENST00000420121 PLA2G4FQ68DD2 849 aa12.4□□□□□ -0.42
SSBP3-206ENST00000420121 ZNF710Q8N1W2 664 aa12.4□□□□□ -0.42
SSBP3-206ENST00000420121 KLHL23Q8NBE8 558 aa12.4□□□□□ -0.42
SSBP3-206ENST00000420121 WASF1Q92558 559 aa12.4□□□□□ -0.42
SSBP3-206ENST00000420121 KHSRPQ92945 711 aaKnown RBP eCLIP12.4□□□□□ -0.42
SSBP3-206ENST00000420121 CWH43Q9H720 699 aa12.4□□□□□ -0.42
SSBP3-206ENST00000420121 LRFN2Q9ULH4 789 aa12.4□□□□□ -0.42
SSBP3-206ENST00000420121 PCDHB7Q9Y5E2 793 aa12.4□□□□□ -0.42
SSBP3-206ENST00000420121 TBKBP1A7MCY6 615 aa12.39□□□□□ -0.43
SSBP3-206ENST00000420121 DDX11L8A8MPP1 907 aa12.39□□□□□ -0.43
SSBP3-206ENST00000420121 H3BQ06 376 aaPredicted RBP12.39□□□□□ -0.43
SSBP3-206ENST00000420121 IL9P15248 144 aa12.39□□□□□ -0.43
SSBP3-206ENST00000420121 QARSP47897 775 aaKnown RBP12.39□□□□□ -0.43
SSBP3-206ENST00000420121 NPEPPSP55786 919 aa12.39□□□□□ -0.43
SSBP3-206ENST00000420121 DLX2Q07687 328 aaPredicted RBP12.39□□□□□ -0.43
SSBP3-206ENST00000420121 EPHA7Q15375 998 aa12.39□□□□□ -0.43
SSBP3-206ENST00000420121 NAALADL2Q58DX5 795 aa12.39□□□□□ -0.43
SSBP3-206ENST00000420121 LRRC55Q6ZSA7 311 aa12.39□□□□□ -0.43
SSBP3-206ENST00000420121 ADGRD2Q7Z7M1 963 aa12.39□□□□□ -0.43
SSBP3-206ENST00000420121 ZNF598Q86UK7 904 aaKnown RBP12.39□□□□□ -0.43
SSBP3-206ENST00000420121 ECHDC2Q86YB7 292 aa12.39□□□□□ -0.43
SSBP3-206ENST00000420121 CASD1Q96PB1 797 aa12.39□□□□□ -0.43
SSBP3-206ENST00000420121 CYP26B1Q9NR63 512 aa12.39□□□□□ -0.43
SSBP3-206ENST00000420121 RGL1Q9NZL6 768 aa12.39□□□□□ -0.43
SSBP3-206ENST00000420121 PCDHGC5Q9Y5F6 944 aa12.39□□□□□ -0.43
SSBP3-206ENST00000420121 A0A087WZ62 844 aa12.38□□□□□ -0.43
SSBP3-206ENST00000420121 GRXCR2A6NFK2 248 aa12.38□□□□□ -0.43
SSBP3-206ENST00000420121 ZBTB39O15060 712 aa12.38□□□□□ -0.43
SSBP3-206ENST00000420121 LINC01565O15544 149 aa12.38□□□□□ -0.43
SSBP3-206ENST00000420121 P4HBP07237 508 aaKnown RBP12.38□□□□□ -0.43
SSBP3-206ENST00000420121 FOSBP53539 338 aa12.38□□□□□ -0.43
SSBP3-206ENST00000420121 CLLU1OSQ5K130 101 aa12.38□□□□□ -0.43
SSBP3-206ENST00000420121 KSR1Q8IVT5 923 aa12.38□□□□□ -0.43
SSBP3-206ENST00000420121 FAM178BQ8IXR5 827 aa12.38□□□□□ -0.43
SSBP3-206ENST00000420121 C4orf19Q8IY42 314 aa12.38□□□□□ -0.43
SSBP3-206ENST00000420121 DIS3L2Q8IYB7 885 aaKnown RBP12.38□□□□□ -0.43
SSBP3-206ENST00000420121 POF1BQ8WVV4 589 aa12.38□□□□□ -0.43
SSBP3-206ENST00000420121 DYDC2Q96IM9 177 aa12.38□□□□□ -0.43
SSBP3-206ENST00000420121 NAP1L4Q99733 375 aaKnown RBP12.38□□□□□ -0.43
SSBP3-206ENST00000420121 FDXACB1Q9BRP7 624 aaPredicted RBP12.38□□□□□ -0.43
SSBP3-206ENST00000420121 LXNQ9BS40 222 aa12.38□□□□□ -0.43
SSBP3-206ENST00000420121 DHX33Q9H6R0 707 aaKnown RBP12.38□□□□□ -0.43
SSBP3-206ENST00000420121 TYW1Q9NV66 732 aaKnown RBP12.38□□□□□ -0.43
SSBP3-206ENST00000420121 SUCLA2Q9P2R7 463 aaPredicted RBP12.38□□□□□ -0.43
SSBP3-206ENST00000420121 A0A0U1RQF3 1178 aa12.37□□□□□ -0.43
SSBP3-206ENST00000420121 TBX10O75333 385 aa12.37□□□□□ -0.43
SSBP3-206ENST00000420121 CSPG5O95196 566 aa12.37□□□□□ -0.43
SSBP3-206ENST00000420121 CENPBP07199 599 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms