RNA–Protein interactions for RNA: ENST00000418653.5

SNAP47-204, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNAP47, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-204ENST00000418653 LMNB2Q03252 620 aa13.15□□□□□ -0.3
SNAP47-204ENST00000418653 GNL2Q13823 731 aaKnown RBP13.15□□□□□ -0.3
SNAP47-204ENST00000418653 TRIM29Q14134 588 aa13.15□□□□□ -0.3
SNAP47-204ENST00000418653 DHX8Q14562 1220 aaKnown RBP13.15□□□□□ -0.3
SNAP47-204ENST00000418653 HSDL1Q3SXM5 330 aa13.15□□□□□ -0.3
SNAP47-204ENST00000418653 RSPH3Q86UC2 560 aa13.15□□□□□ -0.3
SNAP47-204ENST00000418653 IFNL3Q8IZI9 196 aa13.15□□□□□ -0.3
SNAP47-204ENST00000418653 FBXO18Q8NFZ0 1043 aa13.15□□□□□ -0.3
SNAP47-204ENST00000418653 MRFAP1L1Q96HT8 127 aa13.15□□□□□ -0.3
SNAP47-204ENST00000418653 KCNF1Q9H3M0 494 aa13.15□□□□□ -0.3
SNAP47-204ENST00000418653 NGRNQ9NPE2 291 aaKnown RBP13.15□□□□□ -0.3
SNAP47-204ENST00000418653 PYCARDQ9ULZ3 195 aa13.15□□□□□ -0.3
SNAP47-204ENST00000418653 DUSP12Q9UNI6 340 aa13.15□□□□□ -0.3
SNAP47-204ENST00000418653 PI15O43692 258 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 CHRNA1P02708 482 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 TOP1P11387 765 aaKnown RBP13.14□□□□□ -0.31
SNAP47-204ENST00000418653 PPARAQ07869 468 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 LINC01599Q8WXQ3 324 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 COL26A1Q96A83 441 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 TMEM87BQ96K49 555 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 TAAR1Q96RJ0 339 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 GOLPH3LQ9H4A5 285 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 R4GN57 208 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 ANKRD11Q6UB99 2663 aaPredicted RBP13.14□□□□□ -0.31
SNAP47-204ENST00000418653 ZMYM6O95789 1325 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 SPTLC2O15270 562 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 GGPS1O95749 300 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 NR3C2P08235 984 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 FDPSP14324 419 aaKnown RBP13.14□□□□□ -0.31
SNAP47-204ENST00000418653 GHRHRQ02643 423 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 SNW1Q13573 536 aaKnown RBP13.14□□□□□ -0.31
SNAP47-204ENST00000418653 FBXO47Q5MNV8 452 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 ARHGEF16Q5VV41 709 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 KIAA1841Q6NSI8 718 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 C17orf53Q8N3J3 647 aaPredicted RBP13.14□□□□□ -0.31
SNAP47-204ENST00000418653 ENGASEQ8NFI3 743 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 SMOC2Q9H3U7 446 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 COL20A1Q9P218 1284 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 CDV3Q9UKY7 258 aaKnown RBP13.14□□□□□ -0.31
SNAP47-204ENST00000418653 ZNF215Q9UL58 517 aaPredicted RBP13.14□□□□□ -0.31
SNAP47-204ENST00000418653 PCDHA7Q9UN72 937 aa13.14□□□□□ -0.31
SNAP47-204ENST00000418653 FASNP49327 2511 aaKnown RBP13.13□□□□□ -0.31
SNAP47-204ENST00000418653 NRCAMQ92823 1304 aa13.13□□□□□ -0.31
SNAP47-204ENST00000418653 SPTLC1O15269 473 aa13.13□□□□□ -0.31
SNAP47-204ENST00000418653 SNHG28P0DPA3 235 aa13.13□□□□□ -0.31
SNAP47-204ENST00000418653 SP100P23497 879 aaPredicted RBP13.13□□□□□ -0.31
SNAP47-204ENST00000418653 METAP2P50579 478 aaKnown RBP eCLIP13.13□□□□□ -0.31
SNAP47-204ENST00000418653 ZNF543Q08ER8 600 aa13.13□□□□□ -0.31
SNAP47-204ENST00000418653 IQCB1Q15051 598 aa13.13□□□□□ -0.31
SNAP47-204ENST00000418653 NFXL1Q6ZNB6 911 aa13.13□□□□□ -0.31
SNAP47-204ENST00000418653 SUMF1Q8NBK3 374 aa13.13□□□□□ -0.31
SNAP47-204ENST00000418653 LINC00301Q8NCQ3 95 aa13.13□□□□□ -0.31
SNAP47-204ENST00000418653 CYP26B1Q9NR63 512 aa13.13□□□□□ -0.31
SNAP47-204ENST00000418653 PXMP2Q9NR77 195 aa13.13□□□□□ -0.31
SNAP47-204ENST00000418653 MYH6P13533 1939 aa13.13□□□□□ -0.31
SNAP47-204ENST00000418653 FGF18O76093 207 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 ASGR2P07307 311 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 PDHBP11177 359 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 UBA1P22314 1058 aaKnown RBP13.12□□□□□ -0.31
SNAP47-204ENST00000418653 PLCB3Q01970 1234 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 TBC1D8BQ0IIM8 1120 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 TDGQ13569 410 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 FMR1NBQ8N0W7 255 aaPredicted RBP13.12□□□□□ -0.31
SNAP47-204ENST00000418653 WASF1Q92558 559 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 NAPBQ9H115 298 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 CNNM2Q9H8M5 875 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 ERVK-5Q9HDB9 667 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 DZANK1Q9NVP4 752 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 GPR179Q6PRD1 2367 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 SMTNL1A8MU46 457 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 NRDCO43847 1150 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 ORC4O43929 436 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 EOMESO95936 686 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 SCG2P13521 617 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 ERVFC1P60507 584 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 ALX1Q15699 326 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 GPATCH4Q5T3I0 446 aaKnown RBP13.12□□□□□ -0.31
SNAP47-204ENST00000418653 SAMD3Q8N6K7 520 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 LMBR1Q8WVP7 490 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 GPCPD1Q9NPB8 672 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 TCP11L1Q9NUJ3 509 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 SETD4Q9NVD3 440 aa13.12□□□□□ -0.31
SNAP47-204ENST00000418653 MAP3K20Q9NYL2 800 aaKnown RBP13.12□□□□□ -0.31
SNAP47-204ENST00000418653 FRMPD2Q68DX3 1309 aaPredicted RBP13.11□□□□□ -0.31
SNAP47-204ENST00000418653 FOXP2O15409 715 aa13.11□□□□□ -0.31
SNAP47-204ENST00000418653 SP9P0CG40 484 aa13.11□□□□□ -0.31
SNAP47-204ENST00000418653 EIF2AK2P19525 551 aaKnown RBP13.11□□□□□ -0.31
SNAP47-204ENST00000418653 GSDMDP57764 484 aa13.11□□□□□ -0.31
SNAP47-204ENST00000418653 ANTXR2P58335 489 aa13.11□□□□□ -0.31
SNAP47-204ENST00000418653 RUFY4Q6ZNE9 571 aa13.11□□□□□ -0.31
SNAP47-204ENST00000418653 C11orf57Q6ZUT1 292 aaPredicted RBP13.11□□□□□ -0.31
SNAP47-204ENST00000418653 BPIFA3Q9BQP9 254 aa13.11□□□□□ -0.31
SNAP47-204ENST00000418653 MLXIPQ9HAP2 919 aa13.11□□□□□ -0.31
SNAP47-204ENST00000418653 WNT16Q9UBV4 365 aa13.11□□□□□ -0.31
SNAP47-204ENST00000418653 PUF60Q9UHX1 559 aaKnown RBP13.11□□□□□ -0.31
SNAP47-204ENST00000418653 FBXL21Q9UKT6 434 aa13.11□□□□□ -0.31
SNAP47-204ENST00000418653 CLIC4Q9Y696 253 aa13.11□□□□□ -0.31
SNAP47-204ENST00000418653 FRYLO94915 3013 aa13.1□□□□□ -0.31
SNAP47-204ENST00000418653 SH2B2O14492 632 aaPredicted RBP13.1□□□□□ -0.31
SNAP47-204ENST00000418653 ZBTB43O43298 467 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms