RNA–Protein interactions for RNA: ENST00000417243.5

TRAPPC12-206, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 1,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-206ENST00000417243 CTAGE1Q96RT6 745 aa13.9□□□□□ -0.18
TRAPPC12-206ENST00000417243 BLZF1Q9H2G9 400 aa13.9□□□□□ -0.18
TRAPPC12-206ENST00000417243 PARVGQ9HBI0 331 aa13.9□□□□□ -0.18
TRAPPC12-206ENST00000417243 OLFML3Q9NRN5 406 aa13.9□□□□□ -0.18
TRAPPC12-206ENST00000417243 KIAA1468Q9P260 1216 aa13.9□□□□□ -0.18
TRAPPC12-206ENST00000417243 COL4A3BPQ9Y5P4 624 aa13.9□□□□□ -0.18
TRAPPC12-206ENST00000417243 ALPK3Q96L96 1907 aa13.9□□□□□ -0.18
TRAPPC12-206ENST00000417243 NPHP3-ACAD11A0A0J9YXS1 232 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 TREHO43280 583 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 RHOBTB3O94955 611 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 FAM13AO94988 1023 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 RPN1P04843 607 aaKnown RBP13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 CYP2C9P11712 490 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 PLS3P13797 630 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 SCP2P22307 547 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 CASP1P29466 404 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 DNM2P50570 870 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 RBL2Q08999 1139 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 COASYQ13057 564 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 PTK7Q13308 1070 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 MXD4Q14582 209 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 CAMK4Q16566 473 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 FAM47CQ5HY64 1035 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 EFCAB12Q6NXP0 572 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 ANKRD33Q7Z3H0 272 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 TRIML1Q8N9V2 468 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 SLC17A8Q8NDX2 589 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 PSPC1Q8WXF1 523 aaKnown RBP13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 SMARCE1Q969G3 411 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 VTI1AQ96AJ9 217 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 MAP7D2Q96T17 732 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 GTPBP4Q9BZE4 634 aaKnown RBP13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 SENP6Q9GZR1 1112 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 POLR3FQ9H1D9 316 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 C11orf49Q9H6J7 331 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 LARSQ9P2J5 1176 aaKnown RBP13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 KCNG1Q9UIX4 513 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 PCDHA5Q9Y5H7 936 aa13.89□□□□□ -0.19
TRAPPC12-206ENST00000417243 RSPH10B2B2RC85 870 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 ASAP2O43150 1006 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 CAND2O75155 1236 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 LETM1O95202 739 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 RSPH10BP0C881 870 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 MAPTP10636 758 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 CLCN3P51790 818 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 CHMP4BP1P59074 171 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 CDC42EP1Q00587 391 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 CACNB1Q02641 598 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 POU5F1BQ06416 359 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 RAD51AP2Q09MP3 1159 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 DRP2Q13474 957 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 PPP2R5AQ15172 486 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 PTGISQ16647 500 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 FAM102BQ5T8I3 360 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 SLC39A5Q6ZMH5 540 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 NECAB2Q7Z6G3 386 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 FAM126BQ8IXS8 530 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 KIAA0319LQ8IZA0 1049 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 NME8Q8N427 588 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 LRRC71Q8N4P6 559 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 SPIRE2Q8WWL2 714 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 CCDC47Q96A33 483 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 TMEM143Q96AN5 459 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 ABHD8Q96I13 439 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 PAWRQ96IZ0 340 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 TOX2Q96NM4 488 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 FIZ1Q96SL8 496 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 GPRC5CQ9NQ84 441 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 EXOC1Q9NV70 894 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 PANK4Q9NVE7 773 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 RMND1Q9NWS8 449 aa13.88□□□□□ -0.19
TRAPPC12-206ENST00000417243 B4GALT4O60513 344 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 CD4P01730 458 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 IDEP14735 1019 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 GLRA2P23416 452 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 NAMPTP43490 491 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 NCKAP1LP55160 1127 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 SOX10P56693 466 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 ZNF200P98182 395 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 PSMD2Q13200 908 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 DMP1Q13316 513 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 KMT5BQ4FZB7 885 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 COBLL1Q53SF7 1204 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 FAM26FQ5R3K3 315 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 CDCA2Q69YH5 1023 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 RUFY4Q6ZNE9 571 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 ZNF410Q86VK4 478 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 SFR1Q86XK3 245 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 IFNLR1Q8IU57 520 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 METTL13Q8N6R0 699 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 ASAP3Q8TDY4 903 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 PPP1R13LQ8WUF5 828 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 PRPF31Q8WWY3 499 aaKnown RBP13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 BSNDQ8WZ55 320 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 IFT74Q96LB3 600 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 NTPCRQ9BSD7 190 aaKnown RBP13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 NFKBIZQ9BYH8 718 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 ST6GALNAC4Q9H4F1 302 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 SUGCTQ9HAC7 445 aa13.87□□□□□ -0.19
TRAPPC12-206ENST00000417243 TRMT13Q9NUP7 481 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms