RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 POLR3CQ9BUI4 534 aaPredicted RBP15.85■□□□□ 0.13
SLC13A3-205ENST00000417157 DHX33Q9H6R0 707 aaKnown RBP15.85■□□□□ 0.13
SLC13A3-205ENST00000417157 CDHR5Q9HBB8 845 aa15.85■□□□□ 0.13
SLC13A3-205ENST00000417157 ATP6V0A4Q9HBG4 840 aa15.85■□□□□ 0.13
SLC13A3-205ENST00000417157 LRFN2Q9ULH4 789 aa15.85■□□□□ 0.13
SLC13A3-205ENST00000417157 RWDD3Q9Y3V2 267 aa15.85■□□□□ 0.13
SLC13A3-205ENST00000417157 SARSP49591 514 aaKnown RBP15.84■□□□□ 0.13
SLC13A3-205ENST00000417157 ERVK-21P61565 698 aa15.84■□□□□ 0.13
SLC13A3-205ENST00000417157 PTGDRQ13258 359 aa15.84■□□□□ 0.13
SLC13A3-205ENST00000417157 PDIA5Q14554 519 aa15.84■□□□□ 0.13
SLC13A3-205ENST00000417157 SLC24A5Q71RS6 500 aa15.84■□□□□ 0.13
SLC13A3-205ENST00000417157 BRAPQ7Z569 592 aa15.84■□□□□ 0.13
SLC13A3-205ENST00000417157 LINC01599Q8WXQ3 324 aa15.84■□□□□ 0.13
SLC13A3-205ENST00000417157 NACC1Q96RE7 527 aa15.84■□□□□ 0.13
SLC13A3-205ENST00000417157 TMX1Q9H3N1 280 aa15.84■□□□□ 0.13
SLC13A3-205ENST00000417157 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.84■□□□□ 0.13
SLC13A3-205ENST00000417157 RGS18Q9NS28 235 aa15.84■□□□□ 0.13
SLC13A3-205ENST00000417157 PCDHB6Q9Y5E3 794 aa15.84■□□□□ 0.13
SLC13A3-205ENST00000417157 COL4A3BPQ9Y5P4 624 aa15.84■□□□□ 0.13
SLC13A3-205ENST00000417157 ADGRA3Q8IWK6 1321 aa15.84■□□□□ 0.13
SLC13A3-205ENST00000417157 ASAP2O43150 1006 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 BMP15O95972 392 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 IGFBP4P22692 258 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 RPA1P27694 616 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 TOB1P50616 345 aaPredicted RBP15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 DRP2Q13474 957 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 MXD4Q14582 209 aaPredicted RBP15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 NBR1Q14596 966 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 CATSPER3Q86XQ3 398 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 FIBCD1Q8N539 461 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 NLRP4Q96MN2 994 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 ADAM2Q99965 735 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 CERS4Q9HA82 394 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 DACT1Q9NYF0 836 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 LRWD1Q9UFC0 647 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 PCDHB7Q9Y5E2 793 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 PTPRSQ13332 1948 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 WDR81Q562E7 1941 aa15.83■□□□□ 0.12
SLC13A3-205ENST00000417157 A0A087WZ62 844 aa15.82■□□□□ 0.12
SLC13A3-205ENST00000417157 VPS37CA5D8V6 355 aaPredicted RBP15.82■□□□□ 0.12
SLC13A3-205ENST00000417157 DGKIO75912 1065 aa15.82■□□□□ 0.12
SLC13A3-205ENST00000417157 RARRES1P49788 294 aa15.82■□□□□ 0.12
SLC13A3-205ENST00000417157 TFDP1Q14186 410 aa15.82■□□□□ 0.12
SLC13A3-205ENST00000417157 BTG3Q14201 252 aaPredicted RBP15.82■□□□□ 0.12
SLC13A3-205ENST00000417157 DTHD1Q6ZMT9 781 aa15.82■□□□□ 0.12
SLC13A3-205ENST00000417157 HSCBQ8IWL3 235 aa15.82■□□□□ 0.12
SLC13A3-205ENST00000417157 CMTR2Q8IYT2 770 aaKnown RBP15.82■□□□□ 0.12
SLC13A3-205ENST00000417157 C4orf32Q8N8J7 132 aa15.82■□□□□ 0.12
SLC13A3-205ENST00000417157 SNX21Q969T3 373 aa15.82■□□□□ 0.12
SLC13A3-205ENST00000417157 FDXACB1Q9BRP7 624 aaPredicted RBP15.82■□□□□ 0.12
SLC13A3-205ENST00000417157 ELAC1Q9H777 363 aaKnown RBP15.82■□□□□ 0.12
SLC13A3-205ENST00000417157 CHST12Q9NRB3 414 aa15.82■□□□□ 0.12
SLC13A3-205ENST00000417157 DBR1Q9UK59 544 aaKnown RBP15.82■□□□□ 0.12
SLC13A3-205ENST00000417157 HOXA2O43364 376 aa15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 MED24O75448 989 aa15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 ARHGEF15O94989 841 aa15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 SPATA31C1P0DKV0 1188 aa15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 CCT6AP40227 531 aaKnown RBP15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 ATP2C1P98194 919 aaPredicted RBP15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 PCBP1Q15365 356 aaKnown RBP eCLIP15.81■□□□□ 0.123e-7■□□□□ 8.4
SLC13A3-205ENST00000417157 KRT79Q5XKE5 535 aa15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 SRGAP1Q7Z6B7 1085 aa15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 RTN4RL1Q86UN2 441 aaPredicted RBP15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 IGSF22Q8N9C0 903 aa15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 ZNF579Q8NAF0 562 aaKnown RBP15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 MCPH1Q8NEM0 835 aa15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 FBXO22Q8NEZ5 403 aa15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 PRPF31Q8WWY3 499 aaKnown RBP15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 TMEM143Q96AN5 459 aa15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 ZNF689Q96CS4 500 aaPredicted RBP15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 ZNF668Q96K58 619 aaPredicted RBP15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 RC3H2Q9HBD1 1191 aaKnown RBP15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 BMP2KQ9NSY1 1161 aaPredicted RBP15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 TMEM161AQ9NX61 479 aa15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 MTUS1Q9ULD2 1270 aa15.81■□□□□ 0.12
SLC13A3-205ENST00000417157 C9IYK1 514 aa15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 MGEA5O60502 916 aa15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 SKIP12755 728 aa15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 POU3F3P20264 500 aaPredicted RBP15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 PHKA2P46019 1235 aa15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 LAMTOR4Q0VGL1 99 aa15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 ADGRE1Q14246 886 aa15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 ARL6IP4Q66PJ3 421 aaKnown RBP15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 POTEGQ6S5H5 508 aa15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 CATSPER4Q7RTX7 472 aa15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 FERMT3Q86UX7 667 aa15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 CRIPAKQ8N1N5 446 aa15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 SNX29Q8TEQ0 813 aa15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 PIGOQ8TEQ8 1089 aa15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 RSPH1Q8WYR4 309 aa15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 LMCD1Q9NZU5 365 aa15.8■□□□□ 0.12
SLC13A3-205ENST00000417157 ARHGEF35A5YM69 484 aa15.79■□□□□ 0.12
SLC13A3-205ENST00000417157 ZBTB39O15060 712 aa15.79■□□□□ 0.12
SLC13A3-205ENST00000417157 USO1O60763 962 aaKnown RBP15.79■□□□□ 0.12
SLC13A3-205ENST00000417157 HSP90AA1P07900 732 aaKnown RBP15.79■□□□□ 0.12
SLC13A3-205ENST00000417157 PDIA4P13667 645 aaKnown RBP15.79■□□□□ 0.12
SLC13A3-205ENST00000417157 RAB27AP51159 221 aa15.79■□□□□ 0.12
SLC13A3-205ENST00000417157 POU5F1BQ06416 359 aa15.79■□□□□ 0.12
SLC13A3-205ENST00000417157 NCBP1Q09161 790 aaKnown RBP15.79■□□□□ 0.12
SLC13A3-205ENST00000417157 GRB10Q13322 594 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms