RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 LRRC71Q8N4P6 559 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 DCLK2Q8N568 766 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 NCOA7Q8NI08 942 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 BCL7CQ8WUZ0 217 aaPredicted RBP10.66□□□□□ -0.7
LINC01238-201ENST00000416204 RSAD2Q8WXG1 361 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 LRRC2Q9BYS8 371 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 ZNF302Q9NR11 478 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 CYP26B1Q9NR63 512 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 AKT3Q9Y243 479 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 U3KPZ7 1027 aaPredicted RBP10.66□□□□□ -0.7
LINC01238-201ENST00000416204 PRC1O43663 620 aa10.65□□□□□ -0.7
LINC01238-201ENST00000416204 HBP1O60381 514 aa10.65□□□□□ -0.7
LINC01238-201ENST00000416204 ZC3H11AO75152 810 aaKnown RBP eCLIP10.65□□□□□ -0.7
LINC01238-201ENST00000416204 RFX1P22670 979 aa10.65□□□□□ -0.7
LINC01238-201ENST00000416204 NLRP11P59045 1033 aaKnown RBP10.65□□□□□ -0.7
LINC01238-201ENST00000416204 NUCB1Q02818 461 aa10.65□□□□□ -0.7
LINC01238-201ENST00000416204 FAM160B1Q5W0V3 765 aa10.65□□□□□ -0.7
LINC01238-201ENST00000416204 TYW1BQ6NUM6 668 aa10.65□□□□□ -0.7
LINC01238-201ENST00000416204 CABP7Q86V35 215 aa10.65□□□□□ -0.7
LINC01238-201ENST00000416204 MB21D2Q8IYB1 491 aaPredicted RBP10.65□□□□□ -0.7
LINC01238-201ENST00000416204 TNPO1Q92973 898 aaKnown RBP10.65□□□□□ -0.7
LINC01238-201ENST00000416204 LPPQ93052 612 aa10.65□□□□□ -0.7
LINC01238-201ENST00000416204 SCLT1Q96NL6 688 aa10.65□□□□□ -0.7
LINC01238-201ENST00000416204 GBP3Q9H0R5 595 aa10.65□□□□□ -0.7
LINC01238-201ENST00000416204 OSBPL3Q9H4L5 887 aa10.65□□□□□ -0.7
LINC01238-201ENST00000416204 ELAC1Q9H777 363 aaKnown RBP10.65□□□□□ -0.7
LINC01238-201ENST00000416204 CA14Q9ULX7 337 aa10.65□□□□□ -0.7
LINC01238-201ENST00000416204 NFASCO94856 1347 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 MAFGO15525 162 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 DDAH1O94760 285 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 ATG7O95352 703 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 LMNAP02545 664 aaKnown RBP10.64□□□□□ -0.71
LINC01238-201ENST00000416204 GSPT1P15170 499 aaKnown RBP10.64□□□□□ -0.71
LINC01238-201ENST00000416204 ZSCAN20P17040 1043 aaPredicted RBP10.64□□□□□ -0.71
LINC01238-201ENST00000416204 ZNF76P36508 570 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 TDGQ13569 410 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 CEP55Q53EZ4 464 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 ZNF484Q5JVG2 852 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 ODR4Q5SWX8 454 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 WWC2Q6AWC2 1192 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 SMC5Q8IY18 1101 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 PLCD3Q8N3E9 789 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 SLC22A17Q8WUG5 538 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 TMEM169Q96HH4 297 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 CNTNAP3BQ96NU0 1288 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 ANO3Q9BYT9 981 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 CNTNAP3Q9BZ76 1288 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 ZBP1Q9H171 429 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 ADAMTS10Q9H324 1103 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 KCNK12Q9HB15 430 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 RNF216Q9NWF9 866 aaPredicted RBP10.64□□□□□ -0.71
LINC01238-201ENST00000416204 INPP5FQ9Y2H2 1132 aa10.64□□□□□ -0.71
LINC01238-201ENST00000416204 IGKV6D-21A0A0A0MT36 114 aa10.63□□□□□ -0.71
LINC01238-201ENST00000416204 KRBA1A5PL33 1030 aa10.63□□□□□ -0.71
LINC01238-201ENST00000416204 CCDC69A6NI79 296 aa10.63□□□□□ -0.71
LINC01238-201ENST00000416204 MEIS3P2A8K0S8 358 aa10.63□□□□□ -0.71
LINC01238-201ENST00000416204 HOXA2O43364 376 aa10.63□□□□□ -0.71
LINC01238-201ENST00000416204 N4BP1O75113 896 aaKnown RBP10.63□□□□□ -0.71
LINC01238-201ENST00000416204 DCNP07585 359 aaKnown RBP10.63□□□□□ -0.71
LINC01238-201ENST00000416204 ALDH7A1P49419 539 aaKnown RBP10.63□□□□□ -0.71
LINC01238-201ENST00000416204 NAPAP54920 295 aa10.63□□□□□ -0.71
LINC01238-201ENST00000416204 CASC1Q6TDU7 716 aa10.63□□□□□ -0.71
LINC01238-201ENST00000416204 CCDC149Q6ZUS6 474 aa10.63□□□□□ -0.71
LINC01238-201ENST00000416204 MICU3Q86XE3 530 aa10.63□□□□□ -0.71
LINC01238-201ENST00000416204 ACSF2Q96CM8 615 aaPredicted RBP10.63□□□□□ -0.71
LINC01238-201ENST00000416204 LZTS2Q9BRK4 669 aa10.63□□□□□ -0.71
LINC01238-201ENST00000416204 VN1R3Q9BXE9 311 aa10.63□□□□□ -0.71
LINC01238-201ENST00000416204 RWDD1Q9H446 243 aaPredicted RBP10.63□□□□□ -0.71
LINC01238-201ENST00000416204 DZANK1Q9NVP4 752 aa10.63□□□□□ -0.71
LINC01238-201ENST00000416204 DUSP12Q9UNI6 340 aa10.63□□□□□ -0.71
LINC01238-201ENST00000416204 EPG5Q9HCE0 2579 aa10.63□□□□□ -0.71
LINC01238-201ENST00000416204 FAM86B1E9PN63 330 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 MEIS1O00470 390 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 SH2B2O14492 632 aaPredicted RBP10.62□□□□□ -0.71
LINC01238-201ENST00000416204 C2CD2LO14523 706 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 ADAMTS3O15072 1205 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 B4GALT3O60512 393 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 FAM86B2P0C5J1 330 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 GBP2P32456 591 aaPredicted RBP10.62□□□□□ -0.71
LINC01238-201ENST00000416204 GNAQP50148 359 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 SLC26A2P50443 739 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 JAKMIP3Q5VZ66 844 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 EFCAB12Q6NXP0 572 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 MIS18BP1Q6P0N0 1132 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 TMTC3Q6ZXV5 915 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 OTOP3Q7RTS5 596 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 ZNF598Q86UK7 904 aaKnown RBP10.62□□□□□ -0.71
LINC01238-201ENST00000416204 PLA2G4DQ86XP0 818 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 MAP3K14Q99558 947 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 RTP3Q9BQQ7 232 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 TBC1D17Q9HA65 648 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 GABBR1Q9UBS5 961 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 DNAJB4Q9UDY4 337 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 USTQ9Y2C2 406 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 GTF3C3Q9Y5Q9 886 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 COL1A2P08123 1366 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 EVPLQ92817 2033 aa10.62□□□□□ -0.71
LINC01238-201ENST00000416204 CACNA1BQ00975 2339 aa10.61□□□□□ -0.71
LINC01238-201ENST00000416204 DHX15O43143 795 aaKnown RBP10.61□□□□□ -0.71
LINC01238-201ENST00000416204 LRRN2O75325 713 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms