RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 RASGRP4Q8TDF6 673 aa10.79□□□□□ -0.68
SOX9-AS1-201ENST00000412640 SPATA33Q96N06 139 aa10.79□□□□□ -0.68
SOX9-AS1-201ENST00000412640 TMEM47Q9BQJ4 181 aa10.79□□□□□ -0.68
SOX9-AS1-201ENST00000412640 TUT1Q9H6E5 874 aaKnown RBP10.79□□□□□ -0.68
SOX9-AS1-201ENST00000412640 EHMT1Q9H9B1 1298 aa10.79□□□□□ -0.68
SOX9-AS1-201ENST00000412640 CYP26B1Q9NR63 512 aa10.79□□□□□ -0.68
SOX9-AS1-201ENST00000412640 AAASQ9NRG9 546 aa10.79□□□□□ -0.68
SOX9-AS1-201ENST00000412640 DBR1Q9UK59 544 aaKnown RBP10.79□□□□□ -0.68
SOX9-AS1-201ENST00000412640 DUSP12Q9UNI6 340 aa10.79□□□□□ -0.68
SOX9-AS1-201ENST00000412640 STX8Q9UNK0 236 aa10.79□□□□□ -0.68
SOX9-AS1-201ENST00000412640 PCDHB12Q9Y5F1 795 aa10.79□□□□□ -0.68
SOX9-AS1-201ENST00000412640 ZZEF1O43149 2961 aa10.79□□□□□ -0.68
SOX9-AS1-201ENST00000412640 PLEKHA8P1O95397 391 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 EOMESO95936 686 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 TOP1P11387 765 aaKnown RBP10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 TGM1P22735 817 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 SMARCA1P28370 1054 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 GUCY1B3Q02153 619 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 TRIM29Q14134 588 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 MYSM1Q5VVJ2 828 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 PDE12Q6L8Q7 609 aaKnown RBP10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 NPAS4Q8IUM7 802 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 THNSL1Q8IYQ7 743 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 MAML2Q8IZL2 1156 aaPredicted RBP10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 FAM177A1Q8N128 213 aaPredicted RBP10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 FEZF2Q8TBJ5 459 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 SPATA32Q96LK8 384 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 AIFM3Q96NN9 605 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 LZTS2Q9BRK4 669 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 TBC1D17Q9HA65 648 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 PARD6AQ9NPB6 346 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 GPCPD1Q9NPB8 672 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 ENTPD7Q9NQZ7 604 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 RTEL1Q9NZ71 1219 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 COL20A1Q9P218 1284 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 HCSTQ9UBK5 93 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 CA14Q9ULX7 337 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 CNTNAP5Q8WYK1 1306 aa10.78□□□□□ -0.68
SOX9-AS1-201ENST00000412640 PALM3A6NDB9 673 aaPredicted RBP10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 YEATS4O95619 227 aa10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 NASPP49321 788 aaPredicted RBP10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 ZSCAN23Q3MJ62 389 aa10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 USH1GQ495M9 461 aa10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CAVIN1Q6NZI2 390 aaKnown RBP10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SRBD1Q8N5C6 995 aaKnown RBP10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CASP10Q92851 521 aa10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SECISBP2LQ93073 1101 aaKnown RBP10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SYAP1Q96A49 352 aaPredicted RBP10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 TCF25Q9BQ70 676 aa10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 GZF1Q9H116 711 aaPredicted RBP10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 FOXP1Q9H334 677 aaPredicted RBP10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 KCNK12Q9HB15 430 aa10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 GJB4Q9NTQ9 266 aa10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 DLGAP2Q9P1A6 1054 aa10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 TMEM63CQ9P1W3 806 aa10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 TFIP11Q9UBB9 837 aaKnown RBP10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 MAD2L2Q9UI95 211 aa10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 USTQ9Y2C2 406 aa10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 HCFC2Q9Y5Z7 792 aa10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 KIAA1217Q5T5P2 1943 aa10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 FRMPD2Q68DX3 1309 aaPredicted RBP10.77□□□□□ -0.69
SOX9-AS1-201ENST00000412640 MYH6P13533 1939 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 GGPS1O95749 300 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PROS1P07225 676 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SNHG28P0DPA3 235 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 GNAT1P11488 350 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 XBP1P17861 261 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CD52P31358 61 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 DEKP35659 375 aaKnown RBP10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 FOSBP53539 338 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 ARHGAP4P98171 946 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 AKAP17AQ02040 695 aaKnown RBP10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 ATAT1Q5SQI0 421 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CELF3Q5SZQ8 465 aaKnown RBP10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 BTNL9Q6UXG8 535 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 RUFY4Q6ZNE9 571 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SYTL5Q8TDW5 730 aaPredicted RBP10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 NSUN6Q8TEA1 469 aaKnown RBP10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 USP28Q96RU2 1077 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 RMDN3Q96TC7 470 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PHF20Q9BVI0 1012 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SPZ1Q9BXG8 430 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 AGO3Q9H9G7 860 aaKnown RBP10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SH3GLB2Q9NR46 395 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 ZMIZ1Q9ULJ6 1067 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SMG5Q9UPR3 1016 aaKnown RBP10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SIT1Q9Y3P8 196 aa10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 MORC2Q9Y6X9 1032 aaPredicted RBP10.76□□□□□ -0.69
SOX9-AS1-201ENST00000412640 GCN1Q92616 2671 aaKnown RBP10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SLC30A4O14863 429 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 LRRN2O75325 713 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 EIF3JO75822 258 aaKnown RBP10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 LETM1O95202 739 aaPredicted RBP10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 LGALS2P05162 132 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 STAG3L1P0CL83 205 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 GLULP15104 373 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 EIF2AK2P19525 551 aaKnown RBP10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PMLP29590 882 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms