RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 CTIFO43310 598 aaKnown RBP12.08□□□□□ -0.48
PTPRF-204ENST00000412568 SMARCA1P28370 1054 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 ADCY8P40145 1251 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 TAF12Q16514 161 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 KCNK18Q7Z418 384 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 DAGLBQ8NCG7 672 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 MGARPQ8TDB4 240 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 ZNF148Q9UQR1 794 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 E7EVH7 732 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 CTNND1O60716 968 aaKnown RBP12.08□□□□□ -0.48
PTPRF-204ENST00000412568 ATP1A1P05023 1023 aaKnown RBP12.08□□□□□ -0.48
PTPRF-204ENST00000412568 VIMP08670 466 aaKnown RBP12.08□□□□□ -0.48
PTPRF-204ENST00000412568 TXNP10599 105 aaKnown RBP12.08□□□□□ -0.48
PTPRF-204ENST00000412568 MAPK6Q16659 721 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 TMEM270Q6UE05 265 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 DNAAF5Q86Y56 855 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 RNF149Q8NC42 400 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 MTFR1LQ9H019 292 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 KBTBD4Q9NVX7 518 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 SMARCAL1Q9NZC9 954 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 FAM86B1E9PN63 330 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 ABL1P00519 1130 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 FAM86B2P0C5J1 330 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 ADCY1Q08828 1119 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 NAA25Q14CX7 972 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 CCDC91Q7Z6B0 441 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 C2orf69Q8N8R5 385 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 ANKRD7Q92527 254 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 AP5M1Q9H0R1 490 aa12.08□□□□□ -0.48
PTPRF-204ENST00000412568 TBC1D8O95759 1140 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 P4HA1P13674 534 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 VCAM1P19320 739 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 BMP6P22004 513 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 CASP4P49662 377 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 STAT5BP51692 787 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 PLTPP55058 493 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 SEZ6Q53EL9 994 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 FAM71BQ8TC56 605 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 PSPC1Q8WXF1 523 aaKnown RBP12.07□□□□□ -0.48
PTPRF-204ENST00000412568 PPM1EQ8WY54 764 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 MMP19Q99542 508 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 MED10Q9BTT4 135 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 UNC45AQ9H3U1 944 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 MED4Q9NPJ6 270 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 HESX1Q9UBX0 185 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 NUB1Q9Y5A7 615 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 BUB1BO60566 1050 aaPredicted RBP12.07□□□□□ -0.48
PTPRF-204ENST00000412568 GAS8O95995 478 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 PGK2P07205 417 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 SOX10P56693 466 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 MKRN4PQ13434 485 aaPredicted RBP12.07□□□□□ -0.48
PTPRF-204ENST00000412568 TERF2Q15554 542 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 ELOA2Q8IYF1 753 aaPredicted RBP12.07□□□□□ -0.48
PTPRF-204ENST00000412568 LRRC71Q8N4P6 559 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 GLIS3Q8NEA6 775 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 ANKRD36BP1Q96IX9 119 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 MTRQ99707 1265 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 USP20Q9Y2K6 914 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 GAKO14976 1311 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 SFNP31947 248 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 ZNF568Q3ZCX4 644 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 CATSPER4Q7RTX7 472 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 PURBQ96QR8 312 aaKnown RBP12.07□□□□□ -0.48
PTPRF-204ENST00000412568 EHD4Q9H223 541 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 FHOD1Q9Y613 1164 aa12.07□□□□□ -0.48
PTPRF-204ENST00000412568 CHD2O14647 1828 aaKnown RBP12.06□□□□□ -0.48
PTPRF-204ENST00000412568 RNF40O75150 1001 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 GNGT1P63211 74 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 APBA1Q02410 837 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 TMEM62Q0P6H9 643 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 RINT1Q6NUQ1 792 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 POTEAQ6S8J7 498 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 RUFY4Q6ZNE9 571 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 HAUS1Q96CS2 278 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 INTS2Q9H0H0 1204 aaKnown RBP12.06□□□□□ -0.48
PTPRF-204ENST00000412568 TUFT1Q9NNX1 390 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 PNMA3Q9UL41 463 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 STAM2O75886 525 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 FGGP02679 453 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 NEDD9Q14511 834 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 CASC4Q6P4E1 433 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 RPUSD2Q8IZ73 545 aaKnown RBP12.06□□□□□ -0.48
PTPRF-204ENST00000412568 ELMO3Q96BJ8 720 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 C11orf70Q9BRQ4 267 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 HEMGNQ9BXL5 484 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 SEMA6BQ9H3T3 888 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 COMMD10Q9Y6G5 202 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 DUSP10Q9Y6W6 482 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 EIF3CLB5ME19 914 aaKnown RBP12.06□□□□□ -0.48
PTPRF-204ENST00000412568 PDXKO00764 312 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 EPC2Q52LR7 807 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 SCYL3Q8IZE3 742 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 CCDC89Q8N998 374 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 EIF3CQ99613 913 aaKnown RBP12.06□□□□□ -0.48
PTPRF-204ENST00000412568 PPANQ9NQ55 473 aaKnown RBP12.06□□□□□ -0.48
PTPRF-204ENST00000412568 RAB20Q9NX57 234 aa12.06□□□□□ -0.48
PTPRF-204ENST00000412568 PGRMC1O00264 195 aaKnown RBP12.05□□□□□ -0.48
PTPRF-204ENST00000412568 CAPN9O14815 690 aa12.05□□□□□ -0.48
PTPRF-204ENST00000412568 RNF8O76064 485 aa12.05□□□□□ -0.48
PTPRF-204ENST00000412568 CCDC6Q16204 474 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms