RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 RHOBTB3O94955 611 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 EFEMP2O95967 443 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 SYPP08247 313 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 ZBTB48P10074 688 aaPredicted RBP5.92□□□□□ -1.46
LSM5-205ENST00000409952 PEX2P28328 305 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 KIR2DL1P43626 348 aaPredicted RBP5.92□□□□□ -1.46
LSM5-205ENST00000409952 KIR2DL2P43627 348 aaPredicted RBP5.92□□□□□ -1.46
LSM5-205ENST00000409952 NOP2P46087 812 aaKnown RBP5.92□□□□□ -1.46
LSM5-205ENST00000409952 MTNR1BP49286 362 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 CACNB3P54284 484 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 IRF9Q00978 393 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 SRSF2Q01130 221 aaKnown RBP5.92□□□□□ -1.46
LSM5-205ENST00000409952 TNFAIP2Q03169 654 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 SNX17Q15036 470 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 PPP4R3AQ6IN85 833 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 RCSD1Q6JBY9 416 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 CRTC3Q6UUV7 619 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 USP45Q70EL2 814 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 GPR155Q7Z3F1 870 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 MAATS1Q7Z4T9 603 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 SPPL2CQ8IUH8 684 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 LIN37Q96GY3 246 aaPredicted RBP5.92□□□□□ -1.46
LSM5-205ENST00000409952 CDK5RAP3Q96JB5 506 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 MAP6Q96JE9 813 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 APOL5Q9BWW9 433 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 NUP62CLQ9H1M0 184 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 PCIF1Q9H4Z3 704 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 L1RE1Q9UN81 338 aa5.92□□□□□ -1.46
LSM5-205ENST00000409952 ZNF561-AS1K7EIQ3 104 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 DVL2O14641 736 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 DTNBO60941 627 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 NDUFS2O75306 463 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 UBXN7O94888 489 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 IFNGR1P15260 489 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 VAV1P15498 845 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 PDE6AP16499 860 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 PDCP20941 246 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 ENDOUP21128 410 aaKnown RBP5.91□□□□□ -1.46
LSM5-205ENST00000409952 ENPP1P22413 925 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 TRHRP34981 398 aaPredicted RBP5.91□□□□□ -1.46
LSM5-205ENST00000409952 IL6STP40189 918 aaPredicted RBP5.91□□□□□ -1.46
LSM5-205ENST00000409952 MAPK9P45984 424 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 KIF23Q02241 960 aaPredicted RBP5.91□□□□□ -1.46
LSM5-205ENST00000409952 RTP2Q5QGT7 225 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 RNF220Q5VTB9 566 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 EEF1DP3Q658K8 133 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 ZZZ3Q8IYH5 903 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 BHLHE22Q8NFJ8 381 aaPredicted RBP5.91□□□□□ -1.46
LSM5-205ENST00000409952 HHIPL1Q96JK4 782 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 FCRL2Q96LA5 508 aaPredicted RBP5.91□□□□□ -1.46
LSM5-205ENST00000409952 FCRL3Q96P31 734 aaPredicted RBP5.91□□□□□ -1.46
LSM5-205ENST00000409952 MMP19Q99542 508 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 B3GNT5Q9BYG0 378 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 RNF32Q9H0A6 362 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 MYLK2Q9H1R3 596 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 VPS11Q9H270 941 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 ZMAT4Q9H898 229 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 PPARGC1AQ9UBK2 798 aaKnown RBP5.91□□□□□ -1.46
LSM5-205ENST00000409952 RABGAP1Q9Y3P9 1069 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 PCDHA2Q9Y5H9 948 aa5.91□□□□□ -1.46
LSM5-205ENST00000409952 TRBV23OR9-2A0A075B6M9 112 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 LRRC10BA6NIK2 292 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 MYO1BO43795 1136 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 FARP2O94887 1054 aaPredicted RBP5.9□□□□□ -1.46
LSM5-205ENST00000409952 C8AP07357 584 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 TNFAIP3P21580 790 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 CD40P25942 277 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 PPM1AP35813 382 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 PRIM2P49643 509 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 FXR1P51114 621 aaKnown RBP eCLIP5.9□□□□□ -1.46
LSM5-205ENST00000409952 FSCN1Q16658 493 aaKnown RBP5.9□□□□□ -1.46
LSM5-205ENST00000409952 UAP1L1Q3KQV9 507 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 TOR2AQ5JU69 321 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 HHIPL2Q6UWX4 724 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 ZPBP2Q6X784 338 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 NLRX1Q86UT6 975 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 PRR18Q8N4B5 295 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 MYCT1Q8N699 235 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 NAXEQ8NCW5 288 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 PPM1MQ96MI6 270 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 EIF2AK1Q9BQI3 630 aaKnown RBP5.9□□□□□ -1.46
LSM5-205ENST00000409952 SLC12A9Q9BXP2 914 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 C19orf44Q9H6X5 657 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 SMURF1Q9HCE7 757 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 DMRT3Q9NQL9 472 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 GPRC5BQ9NZH0 403 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 TNFRSF10DQ9UBN6 386 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.9□□□□□ -1.46
LSM5-205ENST00000409952 SERPINB13Q9UIV8 391 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 TUBD1Q9UJT1 453 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 GPR52Q9Y2T5 361 aa5.9□□□□□ -1.46
LSM5-205ENST00000409952 YBX2Q9Y2T7 364 aaKnown RBP5.9□□□□□ -1.46
LSM5-205ENST00000409952 LRRFIP2Q9Y608 721 aaKnown RBP5.9□□□□□ -1.46
LSM5-205ENST00000409952 LCHNA4D1U4 455 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 CAPN8A6NHC0 703 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 PRSS47A8MTI9 375 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 FADS2P1A8MWK0 482 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 J3KRW8 73 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 MGEA5O60502 916 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 HIP1RO75146 1068 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms