RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 LRRC15Q8TF66 581 aa16.44■□□□□ 0.22
SUMO1-207ENST00000409498 HERVK_113Q902F9 699 aa16.44■□□□□ 0.22
SUMO1-207ENST00000409498 CDK5RAP3Q96JB5 506 aa16.44■□□□□ 0.22
SUMO1-207ENST00000409498 CCDC43Q96MW1 224 aaKnown RBP16.44■□□□□ 0.22
SUMO1-207ENST00000409498 IPO9Q96P70 1041 aaKnown RBP16.44■□□□□ 0.22
SUMO1-207ENST00000409498 OSBPL7Q9BZF2 842 aa16.44■□□□□ 0.22
SUMO1-207ENST00000409498 BLOC1S4Q9NUP1 217 aa16.44■□□□□ 0.22
SUMO1-207ENST00000409498 KCND2Q9NZV8 630 aa16.44■□□□□ 0.22
SUMO1-207ENST00000409498 CHMP5Q9NZZ3 219 aa16.44■□□□□ 0.22
SUMO1-207ENST00000409498 CCDC39Q9UFE4 941 aa16.44■□□□□ 0.22
SUMO1-207ENST00000409498 ARHGEF35A5YM69 484 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 BAIAP3O94812 1187 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 FGBP02675 491 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 ACRP10323 421 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 TXLNAP40222 546 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 SLC12A3P55017 1021 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 NLRP11P59045 1033 aaKnown RBP16.43■□□□□ 0.22
SUMO1-207ENST00000409498 TMEM62Q0P6H9 643 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 MXD4Q14582 209 aaPredicted RBP16.43■□□□□ 0.22
SUMO1-207ENST00000409498 KARSQ15046 597 aaKnown RBP16.43■□□□□ 0.22
SUMO1-207ENST00000409498 SPECC1Q5M775 1068 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 ADALQ6DHV7 355 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 RINT1Q6NUQ1 792 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 SHC4Q6S5L8 630 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 TSHZ1Q6ZSZ6 1077 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 C1orf186Q6ZWK4 172 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 PSPC1Q8WXF1 523 aaKnown RBP16.43■□□□□ 0.22
SUMO1-207ENST00000409498 APBB2Q92870 758 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 SPATA32Q96LK8 384 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 TIPINQ9BVW5 301 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 CDHR5Q9HBB8 845 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 STK17AQ9UEE5 414 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 COLQQ9Y215 455 aaPredicted RBP16.43■□□□□ 0.22
SUMO1-207ENST00000409498 AKT3Q9Y243 479 aa16.43■□□□□ 0.22
SUMO1-207ENST00000409498 USO1O60763 962 aaKnown RBP16.42■□□□□ 0.22
SUMO1-207ENST00000409498 PLCG1P19174 1290 aa16.42■□□□□ 0.22
SUMO1-207ENST00000409498 SHHQ15465 462 aa16.42■□□□□ 0.22
SUMO1-207ENST00000409498 NAALADL2Q58DX5 795 aa16.42■□□□□ 0.22
SUMO1-207ENST00000409498 C9orf50Q5SZB4 431 aa16.42■□□□□ 0.22
SUMO1-207ENST00000409498 DEFB128Q7Z7B8 93 aa16.42■□□□□ 0.22
SUMO1-207ENST00000409498 IFNLR1Q8IU57 520 aaPredicted RBP16.42■□□□□ 0.22
SUMO1-207ENST00000409498 TDHQ8IZJ6 230 aa16.42■□□□□ 0.22
SUMO1-207ENST00000409498 DBF4BQ8NFT6 615 aa16.42■□□□□ 0.22
SUMO1-207ENST00000409498 TMEM40Q8WWA1 233 aa16.42■□□□□ 0.22
SUMO1-207ENST00000409498 PRPF31Q8WWY3 499 aaKnown RBP16.42■□□□□ 0.22
SUMO1-207ENST00000409498 RAD54LQ92698 747 aa16.42■□□□□ 0.22
SUMO1-207ENST00000409498 TMEM143Q96AN5 459 aa16.42■□□□□ 0.22
SUMO1-207ENST00000409498 CHAMP1Q96JM3 812 aa16.42■□□□□ 0.22
SUMO1-207ENST00000409498 NFKBIZQ9BYH8 718 aa16.42■□□□□ 0.22
SUMO1-207ENST00000409498 AGO3Q9H9G7 860 aaKnown RBP16.42■□□□□ 0.22
SUMO1-207ENST00000409498 COL4A3BPQ9Y5P4 624 aa16.42■□□□□ 0.22
SUMO1-207ENST00000409498 ABHD14A-ACY1A0A1B0GW23 586 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 EFCAB14O75071 495 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 PLA2G4BP0C869 781 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 ACTN1P12814 892 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 DARSP14868 501 aaKnown RBP16.41■□□□□ 0.22
SUMO1-207ENST00000409498 EIF4BP23588 611 aaKnown RBP16.41■□□□□ 0.22
SUMO1-207ENST00000409498 GUCY2CP25092 1073 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 ME1P48163 572 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 LAMTOR4Q0VGL1 99 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 KIZQ2M2Z5 673 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 TCTN1Q2MV58 587 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 ODR4Q5SWX8 454 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 RESP18Q5W5W9 173 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 CCDC73Q6ZRK6 1079 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 RHPN2Q8IUC4 686 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 SEPT8Q92599 483 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 PLIN2Q99541 437 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 OSMRQ99650 979 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 IFIH1Q9BYX4 1025 aaKnown RBP16.41■□□□□ 0.22
SUMO1-207ENST00000409498 IFT122Q9HBG6 1241 aa16.41■□□□□ 0.22
SUMO1-207ENST00000409498 A0A087WZ62 844 aa16.4■□□□□ 0.22
SUMO1-207ENST00000409498 A0A087X0B3 334 aa16.4■□□□□ 0.22
SUMO1-207ENST00000409498 FAM237AA0A1B0GTK4 181 aa16.4■□□□□ 0.22
SUMO1-207ENST00000409498 GHRP10912 638 aa16.4■□□□□ 0.22
SUMO1-207ENST00000409498 NCLP19338 710 aaKnown RBP16.4■□□□□ 0.22
SUMO1-207ENST00000409498 GLRA2P23416 452 aa16.4■□□□□ 0.22
SUMO1-207ENST00000409498 CMA1P23946 247 aa16.4■□□□□ 0.22
SUMO1-207ENST00000409498 ZRSR1Q15695 479 aaKnown RBP16.4■□□□□ 0.22
SUMO1-207ENST00000409498 E2F4Q16254 413 aa16.4■□□□□ 0.22
SUMO1-207ENST00000409498 RRAGBQ5VZM2 374 aa16.4■□□□□ 0.22
SUMO1-207ENST00000409498 SRGAP1Q7Z6B7 1085 aa16.4■□□□□ 0.22
SUMO1-207ENST00000409498 LARP4BQ92615 738 aaKnown RBP16.4■□□□□ 0.22
SUMO1-207ENST00000409498 KIFAP3Q92845 792 aa16.4■□□□□ 0.22
SUMO1-207ENST00000409498 FDXACB1Q9BRP7 624 aaPredicted RBP16.4■□□□□ 0.22
SUMO1-207ENST00000409498 FTHL17Q9BXU8 183 aa16.4■□□□□ 0.22
SUMO1-207ENST00000409498 GCOM2Q9BZD3 368 aaPredicted RBP16.4■□□□□ 0.22
SUMO1-207ENST00000409498 INO80BQ9C086 356 aaPredicted RBP16.4■□□□□ 0.22
SUMO1-207ENST00000409498 C17orf75Q9HAS0 396 aa16.4■□□□□ 0.22
SUMO1-207ENST00000409498 ERVK-5Q9HDB9 667 aa16.4■□□□□ 0.22
SUMO1-207ENST00000409498 PADI3Q9ULW8 664 aa16.4■□□□□ 0.22
SUMO1-207ENST00000409498 NOC2LQ9Y3T9 749 aaKnown RBP16.4■□□□□ 0.22
SUMO1-207ENST00000409498 A0A1W2PQ27 194 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 A0A1W2PQ64 194 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 A0A1W2PQD8 194 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 GPR182O15218 404 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 RPS6KA5O75582 802 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 PTENP60484 403 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 IKBKEQ14164 716 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 TFDP1Q14186 410 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms