RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 MAPK8IP2Q13387 824 aaPredicted RBP22.66■■□□□ 1.22
USP39-203ENST00000409470 TUBB2AQ13885 445 aa22.66■■□□□ 1.22
USP39-203ENST00000409470 HGSNATQ68CP4 663 aa22.66■■□□□ 1.22
USP39-203ENST00000409470 SWSAP1Q6NVH7 229 aa22.66■■□□□ 1.22
USP39-203ENST00000409470 NCAPG2Q86XI2 1143 aa22.66■■□□□ 1.22
USP39-203ENST00000409470 TUBB2BQ9BVA1 445 aa22.66■■□□□ 1.22
USP39-203ENST00000409470 PDCL3Q9H2J4 239 aa22.66■■□□□ 1.22
USP39-203ENST00000409470 CDC23Q9UJX2 597 aa22.66■■□□□ 1.22
USP39-203ENST00000409470 LCA5LO95447 670 aa22.65■■□□□ 1.22
USP39-203ENST00000409470 HAUS6Q7Z4H7 955 aa22.65■■□□□ 1.22
USP39-203ENST00000409470 CEP170P1Q96L14 293 aa22.65■■□□□ 1.22
USP39-203ENST00000409470 PAGR1Q9BTK6 254 aa22.65■■□□□ 1.22
USP39-203ENST00000409470 SPATC1LQ9H0A9 340 aa22.65■■□□□ 1.22
USP39-203ENST00000409470 GCNT4Q9P109 453 aa22.65■■□□□ 1.22
USP39-203ENST00000409470 LOC285556D6RIA3 1793 aa22.65■■□□□ 1.22
USP39-203ENST00000409470 CXCL11O14625 94 aa22.65■■□□□ 1.22
USP39-203ENST00000409470 TLR2O60603 784 aa22.65■■□□□ 1.22
USP39-203ENST00000409470 EIF3JO75822 258 aaKnown RBP22.65■■□□□ 1.22
USP39-203ENST00000409470 UCHL3P15374 230 aa22.65■■□□□ 1.22
USP39-203ENST00000409470 ACTR2P61160 394 aa22.65■■□□□ 1.22
USP39-203ENST00000409470 ARID5AQ03989 594 aa22.65■■□□□ 1.22
USP39-203ENST00000409470 ASIC2Q16515 512 aa22.65■■□□□ 1.22
USP39-203ENST00000409470 KLHDC7AQ5VTJ3 777 aa22.65■■□□□ 1.22
USP39-203ENST00000409470 SLC9A9Q8IVB4 645 aa22.65■■□□□ 1.22
USP39-203ENST00000409470 GTPBP10A4D1E9 387 aaKnown RBP22.64■■□□□ 1.22
USP39-203ENST00000409470 SPDYE5A6NIY4 337 aa22.64■■□□□ 1.22
USP39-203ENST00000409470 SLC16A4O15374 487 aa22.64■■□□□ 1.22
USP39-203ENST00000409470 MYBPC2Q14324 1141 aa22.64■■□□□ 1.22
USP39-203ENST00000409470 MIS18BP1Q6P0N0 1132 aa22.64■■□□□ 1.22
USP39-203ENST00000409470 FAM133AQ8N9E0 248 aa22.64■■□□□ 1.22
USP39-203ENST00000409470 ZC3H15Q8WU90 426 aaKnown RBP22.64■■□□□ 1.22
USP39-203ENST00000409470 L3MBTL3Q96JM7 780 aaPredicted RBP22.64■■□□□ 1.22
USP39-203ENST00000409470 SPAG5Q96R06 1193 aa22.64■■□□□ 1.22
USP39-203ENST00000409470 AIPL1Q9NZN9 384 aa22.64■■□□□ 1.22
USP39-203ENST00000409470 TELO2Q9Y4R8 837 aa22.64■■□□□ 1.22
USP39-203ENST00000409470 LCTP09848 1927 aa22.64■■□□□ 1.21
USP39-203ENST00000409470 MACROD2A1Z1Q3 448 aa22.64■■□□□ 1.21
USP39-203ENST00000409470 ZNF862O60290 1169 aa22.64■■□□□ 1.21
USP39-203ENST00000409470 GFPT1Q06210 699 aaPredicted RBP22.64■■□□□ 1.21
USP39-203ENST00000409470 ASTE1Q2TB18 679 aaPredicted RBP22.64■■□□□ 1.21
USP39-203ENST00000409470 SLC17A8Q8NDX2 589 aa22.64■■□□□ 1.21
USP39-203ENST00000409470 ASCC2Q9H1I8 757 aaPredicted RBP22.64■■□□□ 1.21
USP39-203ENST00000409470 DUSP10Q9Y6W6 482 aa22.64■■□□□ 1.21
USP39-203ENST00000409470 CCDC169A6NNP5 214 aa22.63■■□□□ 1.21
USP39-203ENST00000409470 POTEB2H3BUK9 544 aa22.63■■□□□ 1.21
USP39-203ENST00000409470 MAGEA1P43355 309 aa22.63■■□□□ 1.21
USP39-203ENST00000409470 ALDH5A1P51649 535 aaPredicted RBP22.63■■□□□ 1.21
USP39-203ENST00000409470 GTF2BQ00403 316 aa22.63■■□□□ 1.21
USP39-203ENST00000409470 KLHL30Q0D2K2 578 aa22.63■■□□□ 1.21
USP39-203ENST00000409470 PPP2R5AQ15172 486 aa22.63■■□□□ 1.21
USP39-203ENST00000409470 DPY19L2P1Q6NXN4 242 aa22.63■■□□□ 1.21
USP39-203ENST00000409470 SEPT14Q6ZU15 432 aa22.63■■□□□ 1.21
USP39-203ENST00000409470 RDH13Q8NBN7 331 aa22.63■■□□□ 1.21
USP39-203ENST00000409470 SECISBP2LQ93073 1101 aaKnown RBP22.63■■□□□ 1.21
USP39-203ENST00000409470 ST6GALNAC4Q9H4F1 302 aa22.63■■□□□ 1.21
USP39-203ENST00000409470 PCIF1Q9H4Z3 704 aa22.63■■□□□ 1.21
USP39-203ENST00000409470 FHOD1Q9Y613 1164 aa22.63■■□□□ 1.21
USP39-203ENST00000409470 DOCK5Q9H7D0 1870 aa22.63■■□□□ 1.21
USP39-203ENST00000409470 SMTNP53814 917 aa22.62■■□□□ 1.21
USP39-203ENST00000409470 NCKAP1LP55160 1127 aa22.62■■□□□ 1.21
USP39-203ENST00000409470 FSTL1Q12841 308 aa22.62■■□□□ 1.21
USP39-203ENST00000409470 DMP1Q13316 513 aaPredicted RBP22.62■■□□□ 1.21
USP39-203ENST00000409470 ENOX2Q16206 610 aaKnown RBP22.62■■□□□ 1.21
USP39-203ENST00000409470 ABHD15Q6UXT9 468 aa22.62■■□□□ 1.21
USP39-203ENST00000409470 CCDC60Q8IWA6 550 aaPredicted RBP22.62■■□□□ 1.21
USP39-203ENST00000409470 CEP112Q8N8E3 955 aa22.62■■□□□ 1.21
USP39-203ENST00000409470 SEPT9Q9UHD8 586 aaPredicted RBP22.62■■□□□ 1.21
USP39-203ENST00000409470 A0A0G2JMZ2 1700 aa22.62■■□□□ 1.21
USP39-203ENST00000409470 ICAM3P32942 547 aa22.62■■□□□ 1.21
USP39-203ENST00000409470 FMO5P49326 533 aa22.62■■□□□ 1.21
USP39-203ENST00000409470 SP2Q02086 613 aa22.62■■□□□ 1.21
USP39-203ENST00000409470 PRKCEQ02156 737 aa22.62■■□□□ 1.21
USP39-203ENST00000409470 CYFIP1Q7L576 1253 aa22.62■■□□□ 1.21
USP39-203ENST00000409470 TXLNBQ8N3L3 684 aa22.62■■□□□ 1.21
USP39-203ENST00000409470 AGTPBP1Q9UPW5 1226 aa22.62■■□□□ 1.21
USP39-203ENST00000409470 TISP43B9A030 160 aa22.61■■□□□ 1.21
USP39-203ENST00000409470 SUPT20HL2P0C7V6 817 aa22.61■■□□□ 1.21
USP39-203ENST00000409470 TRIM49P0CI25 452 aa22.61■■□□□ 1.21
USP39-203ENST00000409470 TRIM49CP0CI26 452 aa22.61■■□□□ 1.21
USP39-203ENST00000409470 KRT13P13646 458 aa22.61■■□□□ 1.21
USP39-203ENST00000409470 BFSP1Q12934 665 aa22.61■■□□□ 1.21
USP39-203ENST00000409470 PPIL2Q13356 520 aa22.61■■□□□ 1.21
USP39-203ENST00000409470 EAPPQ56P03 285 aaPredicted RBP22.61■■□□□ 1.21
USP39-203ENST00000409470 KIFAP3Q92845 792 aa22.61■■□□□ 1.21
USP39-203ENST00000409470 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.61■■□□□ 1.21
USP39-203ENST00000409470 SIX2Q9NPC8 291 aa22.61■■□□□ 1.21
USP39-203ENST00000409470 MYO6Q9UM54 1294 aa22.61■■□□□ 1.21
USP39-203ENST00000409470 WDR81Q562E7 1941 aa22.61■■□□□ 1.21
USP39-203ENST00000409470 ENC1O14682 589 aa22.6■■□□□ 1.21
USP39-203ENST00000409470 STBD1O95210 358 aa22.6■■□□□ 1.21
USP39-203ENST00000409470 TEX35Q5T0J7 233 aa22.6■■□□□ 1.21
USP39-203ENST00000409470 SRGAP1Q7Z6B7 1085 aa22.6■■□□□ 1.21
USP39-203ENST00000409470 GOLGA1Q92805 767 aa22.6■■□□□ 1.21
USP39-203ENST00000409470 OPTNQ96CV9 577 aa22.6■■□□□ 1.21
USP39-203ENST00000409470 PUF60Q9UHX1 559 aaKnown RBP22.6■■□□□ 1.21
USP39-203ENST00000409470 FBXL5Q9UKA1 691 aa22.6■■□□□ 1.21
USP39-203ENST00000409470 EXOC7Q9UPT5 735 aa22.6■■□□□ 1.21
USP39-203ENST00000409470 KCNH4Q9UQ05 1017 aa22.6■■□□□ 1.21
USP39-203ENST00000409470 NPTX2P47972 431 aa22.6■■□□□ 1.21
USP39-203ENST00000409470 ARMC9Q7Z3E5 817 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms