RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 KIFC3Q9BVG8 833 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 POLR3FQ9H1D9 316 aaPredicted RBP15.48■□□□□ 0.07
GPNMB-203ENST00000409458 ABHD16BQ9H3Z7 469 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 ST6GALNAC4Q9H4F1 302 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 RRAGDQ9NQL2 400 aaPredicted RBP15.48■□□□□ 0.07
GPNMB-203ENST00000409458 CETN3O15182 167 aa15.47■□□□□ 0.07
GPNMB-203ENST00000409458 CLIC2O15247 247 aa15.47■□□□□ 0.07
GPNMB-203ENST00000409458 TPM2P07951 284 aa15.47■□□□□ 0.07
GPNMB-203ENST00000409458 HOXC6P09630 235 aa15.47■□□□□ 0.07
GPNMB-203ENST00000409458 SMPD1P17405 629 aa15.47■□□□□ 0.07
GPNMB-203ENST00000409458 SFPQP23246 707 aaKnown RBP eCLIP15.47■□□□□ 0.07
GPNMB-203ENST00000409458 NPTX2P47972 431 aa15.47■□□□□ 0.07
GPNMB-203ENST00000409458 CCZ1BP86790 482 aa15.47■□□□□ 0.07
GPNMB-203ENST00000409458 CCZ1P86791 482 aaPredicted RBP15.47■□□□□ 0.07
GPNMB-203ENST00000409458 LAMC2Q13753 1193 aa15.47■□□□□ 0.07
GPNMB-203ENST00000409458 MAN2A1Q16706 1144 aa15.47■□□□□ 0.07
GPNMB-203ENST00000409458 PLPPR4Q7Z2D5 763 aa15.47■□□□□ 0.07
GPNMB-203ENST00000409458 EMID1Q96A84 441 aaPredicted RBP15.47■□□□□ 0.07
GPNMB-203ENST00000409458 FAM167AQ96KS9 214 aa15.47■□□□□ 0.07
GPNMB-203ENST00000409458 DHX33Q9H6R0 707 aaKnown RBP15.47■□□□□ 0.07
GPNMB-203ENST00000409458 NRBP2Q9NSY0 501 aa15.47■□□□□ 0.07
GPNMB-203ENST00000409458 TNPO2O14787 897 aaKnown RBP15.46■□□□□ 0.07
GPNMB-203ENST00000409458 ADCY6O43306 1168 aa15.46■□□□□ 0.07
GPNMB-203ENST00000409458 GNA14O95837 355 aa15.46■□□□□ 0.07
GPNMB-203ENST00000409458 MARSP56192 900 aaKnown RBP15.46■□□□□ 0.07
GPNMB-203ENST00000409458 GTF2BQ00403 316 aa15.46■□□□□ 0.07
GPNMB-203ENST00000409458 PLCB4Q15147 1175 aa15.46■□□□□ 0.07
GPNMB-203ENST00000409458 CCL14Q16627 93 aa15.46■□□□□ 0.07
GPNMB-203ENST00000409458 NFIL3Q16649 462 aa15.46■□□□□ 0.07
GPNMB-203ENST00000409458 VWA3BQ502W6 1294 aa15.46■□□□□ 0.07
GPNMB-203ENST00000409458 HAUS6Q7Z4H7 955 aa15.46■□□□□ 0.07
GPNMB-203ENST00000409458 TMEM161BQ8NDZ6 487 aa15.46■□□□□ 0.07
GPNMB-203ENST00000409458 PPTC7Q8NI37 304 aa15.46■□□□□ 0.07
GPNMB-203ENST00000409458 ATP8B4Q8TF62 1192 aa15.46■□□□□ 0.07
GPNMB-203ENST00000409458 SOCS4Q8WXH5 440 aa15.46■□□□□ 0.07
GPNMB-203ENST00000409458 BBXQ8WY36 941 aaPredicted RBP15.46■□□□□ 0.07
GPNMB-203ENST00000409458 AGPAT3Q9NRZ7 376 aa15.46■□□□□ 0.07
GPNMB-203ENST00000409458 SIP14410 1827 aa15.46■□□□□ 0.07
GPNMB-203ENST00000409458 ADGRA3Q8IWK6 1321 aa15.46■□□□□ 0.06
GPNMB-203ENST00000409458 CCDC169A6NNP5 214 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 CYP2B6P20813 491 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 RFC5P40937 340 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 RGS2P41220 211 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 DNM2P50570 870 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 RTP1P59025 263 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 NOGQ13253 232 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 DUSP28Q4G0W2 176 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 SLC17A8Q8NDX2 589 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 ASAP3Q8TDY4 903 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 AFG1LQ8WV93 481 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 SPIRE2Q8WWL2 714 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 TMEM143Q96AN5 459 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 ACCSQ96QU6 501 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 APBA2Q99767 749 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 GBP3Q9H0R5 595 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 SMARCAD1Q9H4L7 1026 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 C17orf75Q9HAS0 396 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 GJD2Q9UKL4 321 aa15.45■□□□□ 0.06
GPNMB-203ENST00000409458 A0A1W2PQC6 194 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 RASSF10A6NK89 507 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 ZBTB42B2RXF5 422 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 SLC16A3O15427 465 aaKnown RBP15.44■□□□□ 0.06
GPNMB-203ENST00000409458 AKAP3O75969 853 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 GYPCP04921 128 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 LGALS2P05162 132 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 RPL13P26373 211 aaKnown RBP15.44■□□□□ 0.06
GPNMB-203ENST00000409458 ADKP55263 362 aaKnown RBP15.44■□□□□ 0.06
GPNMB-203ENST00000409458 RBL2Q08999 1139 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 PRAMEF19Q5SWL8 479 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 HS2ST1Q7LGA3 356 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 TRIM59Q8IWR1 403 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 SYCP3Q8IZU3 236 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 TC2NQ8N9U0 490 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 SLC7A3Q8WY07 619 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 CAPNS2Q96L46 248 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 ARHGAP39Q9C0H5 1083 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 NDST4Q9H3R1 872 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 TMEM206Q9H813 350 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 KMT5AQ9NQR1 393 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 TISP43B9A030 160 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 CASP4P49662 377 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 KLK7P49862 253 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 SLC26A2P50443 739 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 SMTNP53814 917 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 TBC1D8BQ0IIM8 1120 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 DEFB115Q30KQ5 88 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 FKBP15Q5T1M5 1219 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 OLFML2BQ68BL8 750 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 C17orf53Q8N3J3 647 aaPredicted RBP15.44■□□□□ 0.06
GPNMB-203ENST00000409458 OR6J1Q8NGC5 347 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 CREBZFQ9NS37 354 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 PPME1Q9Y570 386 aa15.44■□□□□ 0.06
GPNMB-203ENST00000409458 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.44■□□□□ 0.06
GPNMB-203ENST00000409458 DENND3A2RUS2 1198 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 AKR1B15C9JRZ8 316 aaPredicted RBP15.43■□□□□ 0.06
GPNMB-203ENST00000409458 MAFO75444 373 aaPredicted RBP15.43■□□□□ 0.06
GPNMB-203ENST00000409458 ALDH1A1P00352 501 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 ZNF286BP0CG31 522 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 ZNF865P0CJ78 1059 aaPredicted RBP15.43■□□□□ 0.06
GPNMB-203ENST00000409458 EPB41P11171 864 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms