RNA–Protein interactions for RNA: ENST00000408742.1

MIR548N-201, Transcript of microRNA 548n, humanhuman

BASIC

Gene MIR548N, Length 75 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548N-201ENST00000408742 UBXN2BQ14CS0 331 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 TRIP6Q15654 476 aaKnown RBP-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 TWIST1Q15672 202 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 FAM189A2Q15884 450 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 CCDC6Q16204 474 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 CR1LQ2VPA4 569 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 PRAMEF13Q5VWM6 474 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 DAB2IPQ5VWQ8 1189 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 ZCCHC12Q6PEW1 402 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 ZNF771Q7L3S4 317 aaPredicted RBP-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 ZNF438Q7Z4V0 828 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 SRGAP1Q7Z6B7 1085 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 ZC3H18Q86VM9 953 aaKnown RBP-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 MARCH9Q86YJ5 346 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 PHTF2Q8N3S3 785 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 SYNPOQ8N3V7 929 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 NFAM1Q8NET5 270 aaPredicted RBP-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 PRSS3P2Q8NHM4 247 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 DDX54Q8TDD1 881 aaKnown RBP-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 NEUROG1Q92886 237 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 KCNB2Q92953 911 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 FOXRED1Q96CU9 486 aaPredicted RBP-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 SCMH1Q96GD3 660 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 PEX11GQ96HA9 241 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 ZNF599Q96NL3 588 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 FAM193BQ96PV7 902 aaPredicted RBP-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 EBF4Q9BQW3 602 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 FAM234AQ9H0X4 552 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 TMEM63CQ9P1W3 806 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 MED16Q9Y2X0 877 aa-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 TDRD6O60522 2096 aaKnown RBP-0.81□□□□□ -2.54
MIR548N-201ENST00000408742 A0A096LPE4 126 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 A0A1W2PPI3 338 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 A0A1W2PPZ6 126 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 AHRRA9YTQ3 701 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 MAN2B1O00754 1011 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 FANCGO15287 622 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 TCEA3O75764 348 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 CYP7B1O75881 506 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 NCR1O76036 304 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 B3GALT4O96024 378 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 GSTP1P09211 210 aaKnown RBP-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 EGR2P11161 476 aaPredicted RBP-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 ITGAMP11215 1152 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 CES1P23141 567 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 DRD3P35462 400 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 KCNJ5P48544 419 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 DLX5P56178 289 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 RBM6P78332 1123 aaKnown RBP-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 PSME1Q06323 249 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 TRIM26Q12899 539 aaPredicted RBP-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 RBMS2Q15434 407 aaKnown RBP-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 SHHQ15465 462 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 RNF212Q495C1 297 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 TSTD2Q5T7W7 516 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 ABHD17BQ5VST6 288 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 C1QL3Q5VWW1 255 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 SPATA2LQ8IUW3 424 aaPredicted RBP-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 KLHDC8BQ8IXV7 354 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 KCT2Q8NC54 265 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 ZNF248Q8NDW4 579 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 PJA1Q8NG27 643 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 ZNF507Q8TCN5 953 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 DPF2Q92785 391 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 ATP2A3Q93084 1043 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 TCTN2Q96GX1 697 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 MPHOSPH9Q99550 1183 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 CDADC1Q9BWV3 514 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 KATNBL1Q9H079 304 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 NELFAQ9H3P2 528 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 PLEKHA4Q9H4M7 779 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 MRPL44Q9H9J2 332 aaKnown RBP-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 PDGFCQ9NRA1 345 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 KRT82Q9NSB4 513 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 NYAP2Q9P242 653 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 WASF3Q9UPY6 502 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 SLC6A5Q9Y345 797 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 NCOR2Q9Y618 2525 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 TNXBP22105 4242 aa-0.82□□□□□ -2.54
MIR548N-201ENST00000408742 HERC1Q15751 4861 aa-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 SHANK1Q9Y566 2161 aa-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 A0A1W2PRX2 142 aa-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 SRRM4A7MD48 611 aaKnown RBP-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 ARHGAP6O43182 974 aa-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 ZBTB7AO95365 584 aa-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 IGKV3-15P01624 115 aa-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 CKMP06732 381 aa-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 COL6A2P12110 1019 aa-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 ARSAP15289 507 aa-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 IL4RP24394 825 aa-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 ETV3P41162 512 aa-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 USP5P45974 858 aa-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 SOX8P57073 446 aa-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 MRPS35P82673 323 aaKnown RBP-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 SMAD3P84022 425 aaKnown RBP-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 GUCY1B3Q02153 619 aa-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 NR1H3Q13133 447 aa-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 TBX2Q13207 712 aaPredicted RBP-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 ELAVL1Q15717 326 aaKnown RBP-0.83□□□□□ -2.54
MIR548N-201ENST00000408742 IZUMO4Q1ZYL8 232 aa-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms