RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 SUPT3HB4E1H0 165 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 XPO1O14980 1071 aaKnown RBP8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 XPOTO43592 962 aaKnown RBP8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 PNMA6AP0CW24 399 aaPredicted RBP8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 COPB2P35606 906 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 PGM1P36871 562 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 CAPZA2P47755 286 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 ARL4CP56559 192 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 PPP2R2AP63151 447 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 SPDYE7PQ495Y7 208 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 KRT39Q6A163 491 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 GALNT4Q8N4A0 578 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 SPATA5Q8NB90 893 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 NFATC2IPQ8NCF5 419 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 LINS1Q8NG48 757 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 OTUD7AQ8TE49 926 aaPredicted RBP8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 SCG3Q8WXD2 468 aaKnown RBP8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 ACCSQ96QU6 501 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 ZSCAN10Q96SZ4 725 aaPredicted RBP8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 SLC5A4Q9NY91 659 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 ARPP21Q9UBL0 812 aaPredicted RBP8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 LRFN2Q9ULH4 789 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 UBE4BO95155 1302 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 CAPN1P07384 714 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 EIF4A3P38919 411 aaKnown RBP8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 LRRC14Q15048 493 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 LRRC41Q15345 812 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 ZNF654Q8IZM8 581 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 RTL3Q8N8U3 475 aaKnown RBP8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 KMT5AQ9NQR1 393 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 ASXL1Q8IXJ9 1541 aa8.4□□□□□ -1.07
RBFOX2-205ENST00000405409 ABCC5O15440 1437 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 LINC00854A0A1B0GVQ3 168 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 HNRNPDLO14979 420 aaKnown RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 CMA1P23946 247 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 ATXN3P54252 364 aaPredicted RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 PMS2P54278 862 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 CYP4A11Q02928 519 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 FAM26FQ5R3K3 315 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 TMC5Q6UXY8 1006 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 IL17RAQ96F46 866 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 GCNAQ96QF7 691 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 NRBP2Q9NSY0 501 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 SYBUQ9NX95 663 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 PCDHA5Q9Y5H7 936 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 DPP8Q6V1X1 898 aaPredicted RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 EXOSC4Q9NPD3 245 aaKnown RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 NXF1Q9UBU9 619 aaKnown RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 M0R3G1 203 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 UBTFL6P0CB48 400 aaPredicted RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 SMARCA1P28370 1054 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 CLK1P49759 484 aaKnown RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 PLIN5Q00G26 463 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 PLOD1Q02809 727 aaPredicted RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 BTKQ06187 659 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 LRRC74AQ0VAA2 488 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 TRIM16LQ309B1 348 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 FBXO38Q6PIJ6 1188 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 CCDC81Q6ZN84 652 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 ANKS3Q6ZW76 656 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 CDH24Q86UP0 819 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 UPF1Q92900 1129 aaKnown RBP eCLIP8.39□□□□□ -1.071e-9■■■■□ 21.9
RBFOX2-205ENST00000405409 PPP1R14AQ96A00 147 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 C19orf60Q96EN9 201 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 TMA16Q96EY4 203 aaKnown RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 PRPF18Q99633 342 aaKnown RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 PRMT1Q99873 361 aaKnown RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 LBHD1Q9BQE6 289 aaPredicted RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 MPP6Q9NZW5 540 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 RNF14Q9UBS8 474 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 GGT7Q9UJ14 662 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 MRPL11Q9Y3B7 192 aaKnown RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 MYL1P05976 194 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 C4BPBP20851 252 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 MAPRE1Q15691 268 aaKnown RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 PKN3Q6P5Z2 889 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 APOA5Q6Q788 366 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 LRRC47Q8N1G4 583 aaKnown RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 CASP10Q92851 521 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 DBNDD2Q9BQY9 259 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 YIPF2Q9BWQ6 316 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 RPAP3Q9H6T3 665 aaPredicted RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 KLHL8Q9P2G9 620 aaPredicted RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 PCDHA7Q9UN72 937 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 TFAMQ00059 246 aaKnown RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 CACNB1Q02641 598 aaPredicted RBP8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 TERF2Q15554 542 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 KLHL38Q2WGJ6 581 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 CHMP1BQ7LBR1 199 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 CXorf56Q9H5V9 222 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 MAN1B1Q9UKM7 699 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 ABCA8O94911 1581 aa8.39□□□□□ -1.07
RBFOX2-205ENST00000405409 KCNA2P16389 499 aa8.38□□□□□ -1.07
RBFOX2-205ENST00000405409 PTGDRQ13258 359 aa8.38□□□□□ -1.07
RBFOX2-205ENST00000405409 MAPRE2Q15555 327 aa8.38□□□□□ -1.07
RBFOX2-205ENST00000405409 KIAA1755Q5JYT7 1200 aa8.38□□□□□ -1.07
RBFOX2-205ENST00000405409 FAM162AQ96A26 154 aa8.38□□□□□ -1.07
RBFOX2-205ENST00000405409 CENPTQ96BT3 561 aa8.38□□□□□ -1.07
RBFOX2-205ENST00000405409 C8orf37Q96NL8 207 aa8.38□□□□□ -1.07
RBFOX2-205ENST00000405409 FHDC1Q9C0D6 1143 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms