RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 ECE2O60344 883 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 FLOT1O75955 427 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 LMNB1P20700 586 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 HSD17B3P37058 310 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 PTGER2P43116 358 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 FNTAP49354 379 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 PRELPP51888 382 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 GUCY2DQ02846 1103 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 EPC2Q52LR7 807 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 TDRD12Q587J7 1177 aaKnown RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 DNAJC21Q5F1R6 531 aaKnown RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 C11orf63Q6NUN7 778 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 MTMR14Q8NCE2 650 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 NEK9Q8TD19 979 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 LMBR1Q8WVP7 490 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 CD101Q93033 1021 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 TLCD1Q96CP7 247 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 DRC1Q96MC2 740 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 GDAP1L1Q96MZ0 367 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 EPN3Q9H201 632 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 BHMT2Q9H2M3 363 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 AGPAT3Q9NRZ7 376 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 PACSIN2Q9UNF0 486 aaPredicted RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 NOC2LQ9Y3T9 749 aaKnown RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 A0A087WUV0 522 aaPredicted RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 F8W031 263 aaPredicted RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 PGRMC1O00264 195 aaKnown RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 EVI5O60447 810 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 VCAM1P19320 739 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 CTNNA2P26232 953 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 STAT1P42224 750 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 PTGIRP43119 386 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 GALCP54803 685 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 PTENP60484 403 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 SETQ01105 290 aaPredicted RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 ZNF844Q08AG5 666 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 CLUL1Q15846 466 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 CYP1B1Q16678 543 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 CBWD6Q4V339 395 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 CBWD3Q5JTY5 395 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 CBWD5Q5RIA9 395 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 FKBP1CQ5VVH2 108 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 DUPD1Q68J44 220 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 SAMD3Q8N6K7 520 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 RNPC3Q96LT9 517 aaKnown RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 CCDC43Q96MW1 224 aaKnown RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 RIT2Q99578 217 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 FAM107BQ9H098 131 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 GCNT4Q9P109 453 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 IGSF9BQ9UPX0 1349 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 SPDYE3A6NKU9 549 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 MPHOSPH10O00566 681 aaKnown RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 SART1O43290 800 aaKnown RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 H2AFZP0C0S5 128 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 PEX5P50542 639 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 BIRC3Q13489 604 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 ALCAMQ13740 583 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 CTTNQ14247 550 aaKnown RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 PTGISQ16647 500 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 PHLDB3Q6NSJ2 640 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 GJB7Q6PEY0 223 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 H2AFVQ71UI9 128 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 TMC3Q7Z5M5 1100 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 PACS2Q86VP3 889 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 GOLGA6L1Q8N7Z2 621 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 RFFLQ8WZ73 363 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 CENPTQ96BT3 561 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 DYDC2Q96IM9 177 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 NACC1Q96RE7 527 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 TMEM109Q9BVC6 243 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 CARD9Q9H257 536 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 UNC45AQ9H3U1 944 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 EFCC1Q9HA90 598 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 PARVGQ9HBI0 331 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 RGL1Q9NZL6 768 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 COG5Q9UP83 839 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 YDJCA8MPS7 323 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 MYO1FO00160 1098 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 FSBPO95073 299 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 KRT14P02533 472 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 NUDT17P0C025 328 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 NMT1P30419 496 aaKnown RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 LSP1P33241 339 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 MDH1P40925 334 aaKnown RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 GNGT1P63211 74 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 MRPS25P82663 173 aaKnown RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 GTF2BQ00403 316 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 COG2Q14746 738 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 PPP2R5EQ16537 467 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 SUGP1Q8IWZ8 645 aaKnown RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 FAM186BQ8IYM0 893 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 C12orf50Q8NA57 414 aaPredicted RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 FLAD1Q8NFF5 587 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 SLC35G2Q8TBE7 412 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 SLCO2A1Q92959 643 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 RPS6KC1Q96S38 1066 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 PSMB7Q99436 277 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 INTS2Q9H0H0 1204 aaKnown RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 MAP3K20Q9NYL2 800 aaKnown RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 APEX2Q9UBZ4 518 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms