RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PLA2G4FQ68DD2 849 aa23.16■■□□□ 1.3
TPM1-208ENST00000404484 GLIS3Q8NEA6 775 aa23.16■■□□□ 1.3
TPM1-208ENST00000404484 NRBP2Q9NSY0 501 aa23.16■■□□□ 1.3
TPM1-208ENST00000404484 ZHX1Q9UKY1 873 aaPredicted RBP23.16■■□□□ 1.3
TPM1-208ENST00000404484 PPME1Q9Y570 386 aa23.16■■□□□ 1.3
TPM1-208ENST00000404484 LRRC10BA6NIK2 292 aa23.15■■□□□ 1.3
TPM1-208ENST00000404484 TCF7P36402 384 aaPredicted RBP23.15■■□□□ 1.3
TPM1-208ENST00000404484 STAT5BP51692 787 aa23.15■■□□□ 1.3
TPM1-208ENST00000404484 KNOP1Q1ED39 458 aaKnown RBP23.15■■□□□ 1.3
TPM1-208ENST00000404484 TAPT1Q6NXT6 567 aa23.15■■□□□ 1.3
TPM1-208ENST00000404484 ZNF507Q8TCN5 953 aa23.15■■□□□ 1.3
TPM1-208ENST00000404484 KIFAP3Q92845 792 aa23.15■■□□□ 1.3
TPM1-208ENST00000404484 SPATA33Q96N06 139 aa23.15■■□□□ 1.3
TPM1-208ENST00000404484 GPR20Q99678 358 aa23.15■■□□□ 1.3
TPM1-208ENST00000404484 CYP26B1Q9NR63 512 aa23.15■■□□□ 1.3
TPM1-208ENST00000404484 TELO2Q9Y4R8 837 aa23.15■■□□□ 1.3
TPM1-208ENST00000404484 PCDHB13Q9Y5F0 798 aa23.15■■□□□ 1.3
TPM1-208ENST00000404484 LGR5O75473 907 aa23.14■■□□□ 1.3
TPM1-208ENST00000404484 GH1P01241 217 aa23.14■■□□□ 1.3
TPM1-208ENST00000404484 PLS3P13797 630 aa23.14■■□□□ 1.3
TPM1-208ENST00000404484 SLC26A2P50443 739 aa23.14■■□□□ 1.3
TPM1-208ENST00000404484 NPEPPSP55786 919 aa23.14■■□□□ 1.3
TPM1-208ENST00000404484 FKBP3Q00688 224 aaKnown RBP23.14■■□□□ 1.3
TPM1-208ENST00000404484 KRT31Q15323 416 aa23.14■■□□□ 1.3
TPM1-208ENST00000404484 EDRF1Q3B7T1 1238 aa23.14■■□□□ 1.3
TPM1-208ENST00000404484 ZCWPW2Q504Y3 356 aa23.14■■□□□ 1.3
TPM1-208ENST00000404484 NECAB2Q7Z6G3 386 aa23.14■■□□□ 1.3
TPM1-208ENST00000404484 DAW1Q8N136 415 aa23.14■■□□□ 1.3
TPM1-208ENST00000404484 CEP63Q96MT8 703 aa23.14■■□□□ 1.3
TPM1-208ENST00000404484 NAP1L5Q96NT1 182 aaPredicted RBP23.14■■□□□ 1.3
TPM1-208ENST00000404484 FGFBP2Q9BYJ0 223 aa23.14■■□□□ 1.3
TPM1-208ENST00000404484 C17orf75Q9HAS0 396 aa23.14■■□□□ 1.3
TPM1-208ENST00000404484 EMSYQ7Z589 1322 aa23.14■■□□□ 1.3
TPM1-208ENST00000404484 MYH11P35749 1972 aa23.14■■□□□ 1.3
TPM1-208ENST00000404484 ARID2Q68CP9 1835 aa23.14■■□□□ 1.29
TPM1-208ENST00000404484 SFI1A8K8P3 1242 aa23.14■■□□□ 1.29
TPM1-208ENST00000404484 MYBP10242 640 aa23.14■■□□□ 1.29
TPM1-208ENST00000404484 AKR1A1P14550 325 aa23.14■■□□□ 1.29
TPM1-208ENST00000404484 GSDMDP57764 484 aa23.14■■□□□ 1.29
TPM1-208ENST00000404484 CCDC144BQ3MJ40 725 aa23.14■■□□□ 1.29
TPM1-208ENST00000404484 PLPPR4Q7Z2D5 763 aa23.14■■□□□ 1.29
TPM1-208ENST00000404484 APTXQ7Z2E3 356 aaKnown RBP23.14■■□□□ 1.29
TPM1-208ENST00000404484 NELFCDQ8IXH7 590 aa23.14■■□□□ 1.29
TPM1-208ENST00000404484 EMID1Q96A84 441 aaPredicted RBP23.14■■□□□ 1.29
TPM1-208ENST00000404484 LENG1Q96BZ8 264 aaPredicted RBP23.14■■□□□ 1.29
TPM1-208ENST00000404484 NIFKQ9BYG3 293 aaKnown RBP23.14■■□□□ 1.29
TPM1-208ENST00000404484 KCTD10Q9H3F6 313 aa23.14■■□□□ 1.29
TPM1-208ENST00000404484 ATP6V0A4Q9HBG4 840 aa23.14■■□□□ 1.29
TPM1-208ENST00000404484 PDGFCQ9NRA1 345 aa23.14■■□□□ 1.29
TPM1-208ENST00000404484 KCNG1Q9UIX4 513 aa23.14■■□□□ 1.29
TPM1-208ENST00000404484 FAM184BQ9ULE4 1060 aa23.14■■□□□ 1.29
TPM1-208ENST00000404484 TMEM150BA6NC51 233 aa23.13■■□□□ 1.29
TPM1-208ENST00000404484 PDXKO00764 312 aa23.13■■□□□ 1.29
TPM1-208ENST00000404484 NKRFO15226 690 aaKnown RBP eCLIP23.13■■□□□ 1.29
TPM1-208ENST00000404484 CALUO43852 315 aaPredicted RBP23.13■■□□□ 1.29
TPM1-208ENST00000404484 GNA14O95837 355 aa23.13■■□□□ 1.29
TPM1-208ENST00000404484 RARBP10826 455 aa23.13■■□□□ 1.29
TPM1-208ENST00000404484 CASP5P51878 434 aa23.13■■□□□ 1.29
TPM1-208ENST00000404484 COPB1P53618 953 aaKnown RBP23.13■■□□□ 1.29
TPM1-208ENST00000404484 NR1I3Q14994 352 aa23.13■■□□□ 1.29
TPM1-208ENST00000404484 ZNF720Q7Z2F6 126 aa23.13■■□□□ 1.29
TPM1-208ENST00000404484 TRMT1LQ7Z2T5 733 aaKnown RBP23.13■■□□□ 1.29
TPM1-208ENST00000404484 IRF2BP1Q8IU81 584 aa23.13■■□□□ 1.29
TPM1-208ENST00000404484 VSTM4Q8IW00 320 aa23.13■■□□□ 1.29
TPM1-208ENST00000404484 DNAH12Q6ZR08 3092 aa23.12■■□□□ 1.29
TPM1-208ENST00000404484 N4BP3O15049 544 aa23.12■■□□□ 1.29
TPM1-208ENST00000404484 ADCY6O43306 1168 aa23.12■■□□□ 1.29
TPM1-208ENST00000404484 RTP1P59025 263 aa23.12■■□□□ 1.29
TPM1-208ENST00000404484 GJC2Q5T442 439 aaPredicted RBP23.12■■□□□ 1.29
TPM1-208ENST00000404484 FAM102BQ5T8I3 360 aa23.12■■□□□ 1.29
TPM1-208ENST00000404484 TMC6Q7Z403 805 aa23.12■■□□□ 1.29
TPM1-208ENST00000404484 ARRDC4Q8NCT1 418 aa23.12■■□□□ 1.29
TPM1-208ENST00000404484 GLG1Q92896 1179 aa23.12■■□□□ 1.29
TPM1-208ENST00000404484 CNOT6LQ96LI5 555 aaKnown RBP23.12■■□□□ 1.29
TPM1-208ENST00000404484 PCYT2Q99447 389 aa23.12■■□□□ 1.29
TPM1-208ENST00000404484 TYW1Q9NV66 732 aaKnown RBP23.12■■□□□ 1.29
TPM1-208ENST00000404484 TRAF3IP3Q9Y228 551 aa23.12■■□□□ 1.29
TPM1-208ENST00000404484 CEP290O15078 2479 aa23.12■■□□□ 1.29
TPM1-208ENST00000404484 COL6A1P12109 1028 aa23.11■■□□□ 1.29
TPM1-208ENST00000404484 RFC5P40937 340 aa23.11■■□□□ 1.29
TPM1-208ENST00000404484 ARHGAP1Q07960 439 aa23.11■■□□□ 1.29
TPM1-208ENST00000404484 HSDL1Q3SXM5 330 aa23.11■■□□□ 1.29
TPM1-208ENST00000404484 MTERF2Q49AM1 385 aa23.11■■□□□ 1.29
TPM1-208ENST00000404484 IQSEC1Q6DN90 963 aa23.11■■□□□ 1.29
TPM1-208ENST00000404484 MAEAQ7L5Y9 396 aa23.11■■□□□ 1.29
TPM1-208ENST00000404484 CREBRFQ8IUR6 639 aa23.11■■□□□ 1.29
TPM1-208ENST00000404484 EXOC8Q8IYI6 725 aa23.11■■□□□ 1.29
TPM1-208ENST00000404484 GOLGA5Q8TBA6 731 aa23.11■■□□□ 1.29
TPM1-208ENST00000404484 FIZ1Q96SL8 496 aa23.11■■□□□ 1.29
TPM1-208ENST00000404484 ST6GALNAC4Q9H4F1 302 aa23.11■■□□□ 1.29
TPM1-208ENST00000404484 SMARCAD1Q9H4L7 1026 aa23.11■■□□□ 1.29
TPM1-208ENST00000404484 C11orf49Q9H6J7 331 aa23.11■■□□□ 1.29
TPM1-208ENST00000404484 RTN4Q9NQC3 1192 aaKnown RBP23.11■■□□□ 1.29
TPM1-208ENST00000404484 XPNPEP3Q9NQH7 507 aa23.11■■□□□ 1.29
TPM1-208ENST00000404484 K7ENM7 598 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 PRPF6O94906 941 aaKnown RBP23.1■■□□□ 1.29
TPM1-208ENST00000404484 PGK1P00558 417 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 ATP4AP20648 1035 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 NMT1P30419 496 aaKnown RBP23.1■■□□□ 1.29
TPM1-208ENST00000404484 ABCD1P33897 745 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms