RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 SCN5AQ14524 2016 aa32.58■■■□□ 2.81
USP42-202ENST00000404008 CTSHP09668 335 aa32.58■■■□□ 2.81
USP42-202ENST00000404008 MLLT1Q03111 559 aaPredicted RBP32.58■■■□□ 2.81
USP42-202ENST00000404008 MGAT3Q09327 533 aa32.58■■■□□ 2.81
USP42-202ENST00000404008 SV2BQ7L1I2 683 aa32.58■■■□□ 2.81
USP42-202ENST00000404008 MAEAQ7L5Y9 396 aa32.58■■■□□ 2.81
USP42-202ENST00000404008 GPBP1Q86WP2 473 aa32.58■■■□□ 2.81
USP42-202ENST00000404008 PSPC1Q8WXF1 523 aaKnown RBP32.58■■■□□ 2.81
USP42-202ENST00000404008 GPRC5CQ9NQ84 441 aa32.58■■■□□ 2.81
USP42-202ENST00000404008 PCDH10Q9P2E7 1040 aa32.58■■■□□ 2.81
USP42-202ENST00000404008 MYH11P35749 1972 aa32.57■■■□□ 2.8
USP42-202ENST00000404008 CHRNA1P02708 482 aa32.57■■■□□ 2.8
USP42-202ENST00000404008 GUCY2CP25092 1073 aa32.57■■■□□ 2.8
USP42-202ENST00000404008 ARL2P36404 184 aa32.57■■■□□ 2.8
USP42-202ENST00000404008 SYKP43405 635 aa32.57■■■□□ 2.8
USP42-202ENST00000404008 PRPF31Q8WWY3 499 aaKnown RBP32.57■■■□□ 2.8
USP42-202ENST00000404008 POLR3FQ9H1D9 316 aaPredicted RBP32.57■■■□□ 2.8
USP42-202ENST00000404008 RSPH10B2B2RC85 870 aa32.56■■■□□ 2.8
USP42-202ENST00000404008 PRPF40AO75400 957 aaKnown RBP32.56■■■□□ 2.8
USP42-202ENST00000404008 IQCF3P0C7M6 154 aa32.56■■■□□ 2.8
USP42-202ENST00000404008 RSPH10BP0C881 870 aa32.56■■■□□ 2.8
USP42-202ENST00000404008 CCL23P55773 120 aa32.56■■■□□ 2.8
USP42-202ENST00000404008 FAM102BQ5T8I3 360 aa32.56■■■□□ 2.8
USP42-202ENST00000404008 MFSD5Q6N075 450 aa32.56■■■□□ 2.8
USP42-202ENST00000404008 RHPN2Q8IUC4 686 aa32.56■■■□□ 2.8
USP42-202ENST00000404008 TIPINQ9BVW5 301 aa32.56■■■□□ 2.8
USP42-202ENST00000404008 CDY2AQ9Y6F7 541 aa32.56■■■□□ 2.8
USP42-202ENST00000404008 GPR32O75388 356 aa32.55■■■□□ 2.8
USP42-202ENST00000404008 GPC3P51654 580 aa32.55■■■□□ 2.8
USP42-202ENST00000404008 ZNF710Q8N1W2 664 aa32.55■■■□□ 2.8
USP42-202ENST00000404008 CELF4Q9BZC1 486 aaKnown RBP32.55■■■□□ 2.8
USP42-202ENST00000404008 TNMDQ9H2S6 317 aa32.55■■■□□ 2.8
USP42-202ENST00000404008 MAGEF1Q9HAY2 307 aa32.55■■■□□ 2.8
USP42-202ENST00000404008 KBTBD4Q9NVX7 518 aa32.55■■■□□ 2.8
USP42-202ENST00000404008 USP25Q9UHP3 1055 aa32.55■■■□□ 2.8
USP42-202ENST00000404008 COL4A3BPQ9Y5P4 624 aa32.55■■■□□ 2.8
USP42-202ENST00000404008 TRPV2Q9Y5S1 764 aa32.55■■■□□ 2.8
USP42-202ENST00000404008 NPHP3-ACAD11A0A0J9YXS1 232 aa32.54■■■□□ 2.8
USP42-202ENST00000404008 M0QZ92 97 aa32.54■■■□□ 2.8
USP42-202ENST00000404008 ACTN4O43707 911 aaKnown RBP32.54■■■□□ 2.8
USP42-202ENST00000404008 NLRP11P59045 1033 aaKnown RBP32.54■■■□□ 2.8
USP42-202ENST00000404008 UBE2HP62256 183 aa32.54■■■□□ 2.8
USP42-202ENST00000404008 CDC42EP1Q00587 391 aa32.54■■■□□ 2.8
USP42-202ENST00000404008 LAMTOR4Q0VGL1 99 aa32.54■■■□□ 2.8
USP42-202ENST00000404008 MXD4Q14582 209 aaPredicted RBP32.54■■■□□ 2.8
USP42-202ENST00000404008 KIZQ2M2Z5 673 aa32.54■■■□□ 2.8
USP42-202ENST00000404008 LONRF3Q496Y0 759 aa32.54■■■□□ 2.8
USP42-202ENST00000404008 KSR1Q8IVT5 923 aa32.54■■■□□ 2.8
USP42-202ENST00000404008 SCLYQ96I15 445 aa32.54■■■□□ 2.8
USP42-202ENST00000404008 PPP1R16BQ96T49 567 aa32.54■■■□□ 2.8
USP42-202ENST00000404008 ADAMTS10Q9H324 1103 aa32.54■■■□□ 2.8
USP42-202ENST00000404008 SERTAD1Q9UHV2 236 aa32.54■■■□□ 2.8
USP42-202ENST00000404008 HIP1RO75146 1068 aa32.53■■■□□ 2.8
USP42-202ENST00000404008 SLFN14P0C7P3 912 aa32.53■■■□□ 2.8
USP42-202ENST00000404008 RAD51AP2Q09MP3 1159 aa32.53■■■□□ 2.8
USP42-202ENST00000404008 MAPK7Q13164 816 aa32.53■■■□□ 2.8
USP42-202ENST00000404008 MBTPS1Q14703 1052 aa32.53■■■□□ 2.8
USP42-202ENST00000404008 FMR1NBQ8N0W7 255 aaPredicted RBP32.53■■■□□ 2.8
USP42-202ENST00000404008 DAW1Q8N136 415 aa32.53■■■□□ 2.8
USP42-202ENST00000404008 ASAP3Q8TDY4 903 aa32.53■■■□□ 2.8
USP42-202ENST00000404008 KIFAP3Q92845 792 aa32.53■■■□□ 2.8
USP42-202ENST00000404008 POLD4Q9HCU8 107 aa32.53■■■□□ 2.8
USP42-202ENST00000404008 ASAP2O43150 1006 aa32.52■■■□□ 2.8
USP42-202ENST00000404008 GLRA2P23416 452 aa32.52■■■□□ 2.8
USP42-202ENST00000404008 CEP57L1Q8IYX8 460 aa32.52■■■□□ 2.8
USP42-202ENST00000404008 ENGASEQ8NFI3 743 aa32.52■■■□□ 2.8
USP42-202ENST00000404008 BADQ92934 168 aa32.52■■■□□ 2.8
USP42-202ENST00000404008 DRC1Q96MC2 740 aa32.52■■■□□ 2.8
USP42-202ENST00000404008 REEP2Q9BRK0 252 aa32.52■■■□□ 2.8
USP42-202ENST00000404008 CDHR5Q9HBB8 845 aa32.52■■■□□ 2.8
USP42-202ENST00000404008 MYMKA6NI61 221 aa32.51■■■□□ 2.79
USP42-202ENST00000404008 ZNF202O95125 648 aa32.51■■■□□ 2.79
USP42-202ENST00000404008 PARNO95453 639 aaKnown RBP32.51■■■□□ 2.79
USP42-202ENST00000404008 CRYBB1P53674 252 aaPredicted RBP32.51■■■□□ 2.79
USP42-202ENST00000404008 FAM160A1Q05DH4 1040 aa32.51■■■□□ 2.79
USP42-202ENST00000404008 SNW1Q13573 536 aaKnown RBP32.51■■■□□ 2.79
USP42-202ENST00000404008 ZNF410Q86VK4 478 aa32.51■■■□□ 2.79
USP42-202ENST00000404008 TMEM199Q8N511 208 aa32.51■■■□□ 2.79
USP42-202ENST00000404008 STAMQ92783 540 aa32.51■■■□□ 2.79
USP42-202ENST00000404008 ZNF668Q96K58 619 aaPredicted RBP32.51■■■□□ 2.79
USP42-202ENST00000404008 NLRP4Q96MN2 994 aa32.51■■■□□ 2.79
USP42-202ENST00000404008 ODF2LQ9ULJ1 636 aa32.51■■■□□ 2.79
USP42-202ENST00000404008 GINS2Q9Y248 185 aa32.51■■■□□ 2.79
USP42-202ENST00000404008 KRT18P05783 430 aaKnown RBP32.5■■■□□ 2.79
USP42-202ENST00000404008 RFC2P35250 354 aa32.5■■■□□ 2.79
USP42-202ENST00000404008 GIT2Q14161 759 aa32.5■■■□□ 2.79
USP42-202ENST00000404008 GPNMBQ14956 572 aa32.5■■■□□ 2.79
USP42-202ENST00000404008 NLRP7Q8WX94 980 aa32.5■■■□□ 2.79
USP42-202ENST00000404008 DDX12PQ92771 950 aa32.5■■■□□ 2.79
USP42-202ENST00000404008 OSMRQ99650 979 aa32.5■■■□□ 2.79
USP42-202ENST00000404008 PDE4DIPQ5VU43 2346 aa32.49■■■□□ 2.79
USP42-202ENST00000404008 LIG1P18858 919 aa32.49■■■□□ 2.79
USP42-202ENST00000404008 CACNB1Q02641 598 aaPredicted RBP32.49■■■□□ 2.79
USP42-202ENST00000404008 CAPSQ13938 189 aa32.49■■■□□ 2.79
USP42-202ENST00000404008 BSNDQ8WZ55 320 aa32.49■■■□□ 2.79
USP42-202ENST00000404008 OSBPL7Q9BZF2 842 aa32.49■■■□□ 2.79
USP42-202ENST00000404008 LRRC27Q9C0I9 530 aa32.49■■■□□ 2.79
USP42-202ENST00000404008 CEP290O15078 2479 aa32.48■■■□□ 2.79
USP42-202ENST00000404008 A0A087WZ62 844 aa32.48■■■□□ 2.79
USP42-202ENST00000404008 NBNO60934 754 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms