RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 DNAJB3Q8WWF6 145 aa36.91■■■■□ 3.5
CSNK1E-204ENST00000403904 WNT8BQ93098 351 aa36.91■■■■□ 3.5
CSNK1E-204ENST00000403904 MYH11P35749 1972 aa36.91■■■■□ 3.5
CSNK1E-204ENST00000403904 MDM2Q00987 491 aaPredicted RBP36.91■■■■□ 3.5
CSNK1E-204ENST00000403904 TAF2Q6P1X5 1199 aa36.91■■■■□ 3.5
CSNK1E-204ENST00000403904 DAW1Q8N136 415 aa36.91■■■■□ 3.5
CSNK1E-204ENST00000403904 TIPINQ9BVW5 301 aa36.91■■■■□ 3.5
CSNK1E-204ENST00000403904 POLR3FQ9H1D9 316 aaPredicted RBP36.91■■■■□ 3.5
CSNK1E-204ENST00000403904 SUCLA2Q9P2R7 463 aaPredicted RBP36.91■■■■□ 3.5
CSNK1E-204ENST00000403904 SFI1A8K8P3 1242 aa36.9■■■■□ 3.5
CSNK1E-204ENST00000403904 MAPK7Q13164 816 aa36.9■■■■□ 3.5
CSNK1E-204ENST00000403904 PTK7Q13308 1070 aa36.9■■■■□ 3.5
CSNK1E-204ENST00000403904 POSTNQ15063 836 aa36.9■■■■□ 3.5
CSNK1E-204ENST00000403904 CAMK4Q16566 473 aa36.9■■■■□ 3.5
CSNK1E-204ENST00000403904 IER5Q5VY09 327 aa36.9■■■■□ 3.5
CSNK1E-204ENST00000403904 TCP11Q8WWU5 503 aa36.9■■■■□ 3.5
CSNK1E-204ENST00000403904 TOX2Q96NM4 488 aa36.9■■■■□ 3.5
CSNK1E-204ENST00000403904 GTPBP6O43824 516 aaPredicted RBP36.89■■■■□ 3.5
CSNK1E-204ENST00000403904 PNOCQ13519 176 aa36.89■■■■□ 3.5
CSNK1E-204ENST00000403904 AKT3Q9Y243 479 aa36.89■■■■□ 3.5
CSNK1E-204ENST00000403904 DCDC2CA8MYV0 355 aa36.88■■■■□ 3.49
CSNK1E-204ENST00000403904 TLR3O15455 904 aaKnown RBP36.88■■■■□ 3.49
CSNK1E-204ENST00000403904 ARL2P36404 184 aa36.88■■■■□ 3.49
CSNK1E-204ENST00000403904 ASIC1P78348 528 aa36.88■■■■□ 3.49
CSNK1E-204ENST00000403904 PRPF31Q8WWY3 499 aaKnown RBP36.88■■■■□ 3.49
CSNK1E-204ENST00000403904 DHX38Q92620 1227 aaKnown RBP36.88■■■■□ 3.49
CSNK1E-204ENST00000403904 ERCC4Q92889 916 aaPredicted RBP36.88■■■■□ 3.49
CSNK1E-204ENST00000403904 ODF2LQ9ULJ1 636 aa36.88■■■■□ 3.49
CSNK1E-204ENST00000403904 VTNP04004 478 aa36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 IDEP14735 1019 aa36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 PSPC1Q8WXF1 523 aaKnown RBP36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 KIFAP3Q92845 792 aa36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 DRC1Q96MC2 740 aa36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 MAP7D2Q96T17 732 aa36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 ZHX3Q9H4I2 956 aa36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 HOOK1Q9UJC3 728 aaKnown RBP36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 TMEM62Q0P6H9 643 aa36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 FAAP100Q0VG06 881 aa36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 CNNM4Q6P4Q7 775 aa36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 RHPN2Q8IUC4 686 aa36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 KSR1Q8IVT5 923 aa36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 ELOA2Q8IYF1 753 aaPredicted RBP36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 ASAP3Q8TDY4 903 aa36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 CLSTN2Q9H4D0 955 aa36.87■■■■□ 3.49
CSNK1E-204ENST00000403904 TBCAO75347 108 aaKnown RBP36.86■■■■□ 3.49
CSNK1E-204ENST00000403904 MYL1P05976 194 aa36.86■■■■□ 3.49
CSNK1E-204ENST00000403904 DPYDQ12882 1025 aa36.86■■■■□ 3.49
CSNK1E-204ENST00000403904 PPP1R16BQ96T49 567 aa36.86■■■■□ 3.49
CSNK1E-204ENST00000403904 FAM13AO94988 1023 aa36.85■■■■□ 3.49
CSNK1E-204ENST00000403904 BSNDQ8WZ55 320 aa36.85■■■■□ 3.49
CSNK1E-204ENST00000403904 ZNF668Q96K58 619 aaPredicted RBP36.85■■■■□ 3.49
CSNK1E-204ENST00000403904 NUP62CLQ9H1M0 184 aa36.85■■■■□ 3.49
CSNK1E-204ENST00000403904 COL4A3BPQ9Y5P4 624 aa36.85■■■■□ 3.49
CSNK1E-204ENST00000403904 GLRA2P23416 452 aa36.84■■■■□ 3.49
CSNK1E-204ENST00000403904 LAMTOR4Q0VGL1 99 aa36.84■■■■□ 3.49
CSNK1E-204ENST00000403904 PANK4Q9NVE7 773 aa36.84■■■■□ 3.49
CSNK1E-204ENST00000403904 ALPK3Q96L96 1907 aa36.84■■■■□ 3.49
CSNK1E-204ENST00000403904 THPOP40225 353 aa36.83■■■■□ 3.49
CSNK1E-204ENST00000403904 TRIM71Q2Q1W2 868 aaKnown RBP36.83■■■■□ 3.49
CSNK1E-204ENST00000403904 KLHL40Q2TBA0 621 aa36.83■■■■□ 3.49
CSNK1E-204ENST00000403904 RSPH3Q86UC2 560 aa36.83■■■■□ 3.49
CSNK1E-204ENST00000403904 NME8Q8N427 588 aa36.83■■■■□ 3.49
CSNK1E-204ENST00000403904 PARVGQ9HBI0 331 aa36.83■■■■□ 3.49
CSNK1E-204ENST00000403904 ZNF131P52739 623 aa36.83■■■■□ 3.49
CSNK1E-204ENST00000403904 MXD4Q14582 209 aaPredicted RBP36.83■■■■□ 3.49
CSNK1E-204ENST00000403904 MYCT1Q8N699 235 aa36.83■■■■□ 3.49
CSNK1E-204ENST00000403904 FRMD3A2A2Y4 597 aa36.82■■■■□ 3.48
CSNK1E-204ENST00000403904 PEX3P56589 373 aa36.82■■■■□ 3.48
CSNK1E-204ENST00000403904 RPAINQ86UA6 219 aa36.82■■■■□ 3.48
CSNK1E-204ENST00000403904 CCDC65Q8IXS2 484 aa36.82■■■■□ 3.48
CSNK1E-204ENST00000403904 KLRC4O43908 158 aa36.81■■■■□ 3.48
CSNK1E-204ENST00000403904 SRGAP2CP0DJJ0 459 aa36.81■■■■□ 3.48
CSNK1E-204ENST00000403904 PLS3P13797 630 aa36.81■■■■□ 3.48
CSNK1E-204ENST00000403904 NLRP11P59045 1033 aaKnown RBP36.81■■■■□ 3.48
CSNK1E-204ENST00000403904 UNC13DQ70J99 1090 aa36.81■■■■□ 3.48
CSNK1E-204ENST00000403904 IFT74Q96LB3 600 aa36.81■■■■□ 3.48
CSNK1E-204ENST00000403904 NLRP4Q96MN2 994 aa36.81■■■■□ 3.48
CSNK1E-204ENST00000403904 LARSQ9P2J5 1176 aaKnown RBP36.81■■■■□ 3.48
CSNK1E-204ENST00000403904 PCDHA5Q9Y5H7 936 aa36.81■■■■□ 3.48
CSNK1E-204ENST00000403904 ASAP2O43150 1006 aa36.8■■■■□ 3.48
CSNK1E-204ENST00000403904 TRAK2O60296 914 aa36.8■■■■□ 3.48
CSNK1E-204ENST00000403904 RPN1P04843 607 aaKnown RBP36.8■■■■□ 3.48
CSNK1E-204ENST00000403904 CLTBP09497 229 aa36.8■■■■□ 3.48
CSNK1E-204ENST00000403904 CTSHP09668 335 aa36.8■■■■□ 3.48
CSNK1E-204ENST00000403904 CAPSQ13938 189 aa36.8■■■■□ 3.48
CSNK1E-204ENST00000403904 KIZQ2M2Z5 673 aa36.8■■■■□ 3.48
CSNK1E-204ENST00000403904 HERC4Q5GLZ8 1057 aaPredicted RBP36.8■■■■□ 3.48
CSNK1E-204ENST00000403904 ODR4Q5SWX8 454 aa36.8■■■■□ 3.48
CSNK1E-204ENST00000403904 C17orf75Q9HAS0 396 aa36.8■■■■□ 3.48
CSNK1E-204ENST00000403904 GINS2Q9Y248 185 aa36.8■■■■□ 3.48
CSNK1E-204ENST00000403904 PVALEFA0A1B0GWK0 134 aa36.79■■■■□ 3.48
CSNK1E-204ENST00000403904 CKBP12277 381 aa36.79■■■■□ 3.48
CSNK1E-204ENST00000403904 GPC3P51654 580 aa36.79■■■■□ 3.48
CSNK1E-204ENST00000403904 COASYQ13057 564 aa36.79■■■■□ 3.48
CSNK1E-204ENST00000403904 SKOR2Q2VWA4 1001 aaPredicted RBP36.79■■■■□ 3.48
CSNK1E-204ENST00000403904 CAVIN1Q6NZI2 390 aaKnown RBP36.79■■■■□ 3.48
CSNK1E-204ENST00000403904 SFR1Q86XK3 245 aa36.79■■■■□ 3.48
CSNK1E-204ENST00000403904 RNF149Q8NC42 400 aa36.79■■■■□ 3.48
CSNK1E-204ENST00000403904 TMEM63CQ9P1W3 806 aa36.79■■■■□ 3.48
CSNK1E-204ENST00000403904 GPR32O75388 356 aa36.78■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms