RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CLIP3Q96DZ5 547 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 EPB41L4BQ9H329 900 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 DMRT3Q9NQL9 472 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 ZNF277Q9NRM2 450 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 DDX20Q9UHI6 824 aaKnown RBP5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 EVLQ9UI08 416 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 IRS2Q9Y4H2 1338 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 CCDC194A0A1B0GVG4 234 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 ITGB5P18084 799 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 LPOP22079 712 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 UAP1L1Q3KQV9 507 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 IFIT1BQ5T764 474 aaKnown RBP5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 OLFML2BQ68BL8 750 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 NXNQ6DKJ4 435 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 SLC41A1Q8IVJ1 513 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 CALML6Q8TD86 181 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 MZB1Q8WU39 189 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 CPA5Q8WXQ8 436 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 AUTS2Q8WXX7 1259 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 CCDC136Q96JN2 1154 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 NOL10Q9BSC4 688 aaKnown RBP5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 OR10A5Q9H207 317 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 IFT122Q9HBG6 1241 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 TCF7L1Q9HCS4 588 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 DLL4Q9NR61 685 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 HSPBP1Q9NZL4 362 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 PRSS50Q9UI38 385 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 CDC42EP3Q9UKI2 254 aa5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P17-201ENST00000403495 AP1G1O43747 822 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 OPHN1O60890 802 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 APEX1P27695 318 aaKnown RBP5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 MRPS9P82933 396 aaKnown RBP5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 FOXO4P98177 505 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 MAP9Q49MG5 647 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 KANK2Q63ZY3 851 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 B3GNT8Q7Z7M8 397 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 NBPF11Q86T75 865 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 DPF2Q92785 391 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 RPGRQ92834 1020 aaKnown RBP5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 CAMKK2Q96RR4 588 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 BTBD2Q9BX70 525 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 SLC12A5Q9H2X9 1139 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 GCM1Q9NP62 436 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 FTSJ1Q9UET6 329 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 DENND2AQ9ULE3 1009 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 DNM3Q9UQ16 869 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 CDY2AQ9Y6F7 541 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 NUMBLQ9Y6R0 609 aa5.08□□□□□ -1.6
HMGB1P17-201ENST00000403495 LRRC10BA6NIK2 292 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 HRKO00198 91 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 N4BP3O15049 544 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 PLA2G1BP04054 148 aaKnown RBP5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 IGFBP6P24592 240 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 CYP2C19P33261 490 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 KRT85P78386 507 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 GRM3Q14832 879 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 TARBP2Q15633 366 aaKnown RBP5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 WDR72Q3MJ13 1102 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 RRP12Q5JTH9 1297 aaKnown RBP5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 MBNL2Q5VZF2 373 aaKnown RBP5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 KSR2Q6VAB6 950 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 MIER2Q8N344 545 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 OR5AN1Q8NGI8 311 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 WDR48Q8TAF3 677 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 NRG4Q8WWG1 115 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 GAB3Q8WWW8 586 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 ZBTB8AQ96BR9 441 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 RAX2Q96IS3 184 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 TMEM209Q96SK2 561 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 FDXACB1Q9BRP7 624 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 C11orf84Q9BUA3 381 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 ACE2Q9BYF1 805 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 GTPBP4Q9BZE4 634 aaKnown RBP5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 RNF38Q9H0F5 515 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 KCND1Q9NSA2 647 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 OBP2AQ9NY56 170 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 DNAI1Q9UI46 699 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 PNMA8BQ9ULN7 279 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 PCDHB6Q9Y5E3 794 aa5.07□□□□□ -1.6
HMGB1P17-201ENST00000403495 A0A0A6YYJ9 748 aa5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 A0A0A6YYK5 440 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 KIF3BO15066 747 aa5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 HNRNPLP14866 589 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 PFKLP17858 780 aa5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 STAT5BP51692 787 aa5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 MLLT6P55198 1093 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 MGAT5Q09328 741 aa5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 SPIDRQ14159 915 aa5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 GFOD2Q3B7J2 385 aa5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 ARHGAP29Q52LW3 1261 aa5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 CXorf57Q6NSI4 855 aaKnown RBP5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 OTOP2Q7RTS6 562 aa5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 GRAMD1CQ8IYS0 662 aa5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 THEMISQ8N1K5 641 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 OR14C36Q8NHC7 312 aa5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 RAB24Q969Q5 203 aa5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 CLIC6Q96NY7 704 aa5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 SOX7Q9BT81 388 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms