RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 C1QBPQ07021 282 aaKnown RBP11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 TMEM62Q0P6H9 643 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 LPIN1Q14693 890 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 KARSQ15046 597 aaKnown RBP11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 FBXO47Q5MNV8 452 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 TMEM240Q5SV17 173 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 CNKSR3Q6P9H4 555 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 SHC4Q6S5L8 630 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 PADI6Q6TGC4 694 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 CHRDL2Q6WN34 429 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 TSHZ1Q6ZSZ6 1077 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 FAM43BQ6ZT52 329 aaPredicted RBP11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 DEFB128Q7Z7B8 93 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 ZNF410Q86VK4 478 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 SYT2Q8N9I0 419 aaPredicted RBP11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 MCPH1Q8NEM0 835 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 CDK5RAP3Q96JB5 506 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 CHAMP1Q96JM3 812 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 SPATA32Q96LK8 384 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 CCDC43Q96MW1 224 aaKnown RBP11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 IPO9Q96P70 1041 aaKnown RBP11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 CDHR5Q9HBB8 845 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 BLOC1S4Q9NUP1 217 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 KCND2Q9NZV8 630 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 CHMP5Q9NZZ3 219 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 SUCLA2Q9P2R7 463 aaPredicted RBP11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 CCDC39Q9UFE4 941 aa11.62□□□□□ -0.55
CYCSP55-201ENST00000399027 ASAP2O43150 1006 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 BAIAP3O94812 1187 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 FGBP02675 491 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 ACRP10323 421 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 ARL2P36404 184 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 ME1P48163 572 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 NLRP11P59045 1033 aaKnown RBP11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 MXD4Q14582 209 aaPredicted RBP11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 KIZQ2M2Z5 673 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 RASIP1Q5U651 963 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 RESP18Q5W5W9 173 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 ADALQ6DHV7 355 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 RINT1Q6NUQ1 792 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 C1orf186Q6ZWK4 172 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 ZNF365Q70YC5 407 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 RHPN2Q8IUC4 686 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 TDHQ8IZJ6 230 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 TMEM40Q8WWA1 233 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 PSPC1Q8WXF1 523 aaKnown RBP11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 HERVK_113Q902F9 699 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 RAD54LQ92698 747 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 APBB2Q92870 758 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 TMEM143Q96AN5 459 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 PLIN2Q99541 437 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 BMP2KQ9NSY1 1161 aaPredicted RBP11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 STK17AQ9UEE5 414 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 COLQQ9Y215 455 aaPredicted RBP11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 COL4A3BPQ9Y5P4 624 aa11.61□□□□□ -0.55
CYCSP55-201ENST00000399027 A0A087X0B3 334 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 PLA2G4BP0C869 781 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 GHRP10912 638 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 ACTN1P12814 892 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 NCLP19338 710 aaKnown RBP11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 EIF4BP23588 611 aaKnown RBP11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 GUCY2CP25092 1073 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 POU5F1BQ06416 359 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 LAMTOR4Q0VGL1 99 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 SHHQ15465 462 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 ZRSR1Q15695 479 aaKnown RBP11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 TCTN1Q2MV58 587 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 NAALADL2Q58DX5 795 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 C9orf50Q5SZB4 431 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 CCDC73Q6ZRK6 1079 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 IFNLR1Q8IU57 520 aaPredicted RBP11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 DBF4BQ8NFT6 615 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 PRPF31Q8WWY3 499 aaKnown RBP11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 LARP4BQ92615 738 aaKnown RBP11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 OSMRQ99650 979 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 RUSC1Q9BVN2 902 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 TIPINQ9BVW5 301 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 NFKBIZQ9BYH8 718 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 IFIH1Q9BYX4 1025 aaKnown RBP11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 AGO3Q9H9G7 860 aaKnown RBP11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 IFT122Q9HBG6 1241 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 CEP290O15078 2479 aa11.6□□□□□ -0.55
CYCSP55-201ENST00000399027 A0A087WZ62 844 aa11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 FAM237AA0A1B0GTK4 181 aa11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 ABHD14A-ACY1A0A1B0GW23 586 aa11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 DARSP14868 501 aaKnown RBP11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 GLRA2P23416 452 aa11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 MAPK7Q13164 816 aa11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 CAPSQ13938 189 aa11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 E2F4Q16254 413 aa11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 ARSHQ5FYA8 562 aa11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 ODR4Q5SWX8 454 aa11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 RRAGBQ5VZM2 374 aa11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 KSR1Q8IVT5 923 aa11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 RASSF8Q8NHQ8 419 aa11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 ASAP3Q8TDY4 903 aa11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 NLRP7Q8WX94 980 aa11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 SEPT8Q92599 483 aa11.59□□□□□ -0.55
CYCSP55-201ENST00000399027 KIFAP3Q92845 792 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms