RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 RPS6KC1Q96S38 1066 aa12.07□□□□□ -0.48
IFT140-202ENST00000397417 TMEM206Q9H813 350 aa12.07□□□□□ -0.48
IFT140-202ENST00000397417 NGRNQ9NPE2 291 aaKnown RBP12.07□□□□□ -0.48
IFT140-202ENST00000397417 TBC1D22BQ9NU19 505 aa12.07□□□□□ -0.48
IFT140-202ENST00000397417 HESX1Q9UBX0 185 aa12.07□□□□□ -0.48
IFT140-202ENST00000397417 KNL1Q8NG31 2342 aa12.07□□□□□ -0.48
IFT140-202ENST00000397417 SRCAPQ6ZRS2 3230 aa12.07□□□□□ -0.48
IFT140-202ENST00000397417 PVALEFA0A1B0GWK0 134 aa12.07□□□□□ -0.48
IFT140-202ENST00000397417 PPP1R3GB7ZBB8 358 aa12.07□□□□□ -0.48
IFT140-202ENST00000397417 RGL2O15211 777 aa12.07□□□□□ -0.48
IFT140-202ENST00000397417 C6orf222P0C671 652 aaPredicted RBP12.07□□□□□ -0.48
IFT140-202ENST00000397417 NYAP1Q6ZVC0 841 aa12.07□□□□□ -0.48
IFT140-202ENST00000397417 IFT20Q8IY31 132 aa12.07□□□□□ -0.48
IFT140-202ENST00000397417 HEXIM2Q96MH2 286 aaKnown RBP12.07□□□□□ -0.48
IFT140-202ENST00000397417 TARS2Q9BW92 718 aaKnown RBP12.07□□□□□ -0.48
IFT140-202ENST00000397417 ATP6V0A4Q9HBG4 840 aa12.07□□□□□ -0.48
IFT140-202ENST00000397417 PCSK1NQ9UHG2 260 aa12.07□□□□□ -0.48
IFT140-202ENST00000397417 CCL15-CCL14A0A0B4J2E2 113 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 GOLGA6CA6NDK9 693 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 TISP43B9A030 160 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 PLSCR1O15162 318 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 GOLGA6DP0CG33 693 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 SAT1P21673 171 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 HOXA10P31260 410 aaPredicted RBP12.06□□□□□ -0.48
IFT140-202ENST00000397417 CCL15Q16663 113 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 OR6B3Q8NGW1 331 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 PSPC1Q8WXF1 523 aaKnown RBP12.06□□□□□ -0.48
IFT140-202ENST00000397417 BPIFA3Q9BQP9 254 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 FAM204AQ9H8W3 233 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 VPS37BQ9H9H4 285 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 GOLGA6AQ9NYA3 693 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 CYP26A1O43174 497 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 GYPCP04921 128 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 IFNAR2P48551 515 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 KRT76Q01546 638 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 PPP2R5AQ15172 486 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 SRGAP1Q7Z6B7 1085 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 IPO4Q8TEX9 1081 aaKnown RBP12.06□□□□□ -0.48
IFT140-202ENST00000397417 MS4A14Q96JA4 679 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 NUCKS1Q9H1E3 243 aaKnown RBP12.06□□□□□ -0.48
IFT140-202ENST00000397417 ZWILCHQ9H900 591 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 FHOD1Q9Y613 1164 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 ATP2A1O14983 1001 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 LMNB1P20700 586 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 VAMP7P51809 220 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 GJC2Q5T442 439 aaPredicted RBP12.06□□□□□ -0.48
IFT140-202ENST00000397417 OR6B2Q6IFH4 312 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 FBXO16Q8IX29 292 aaPredicted RBP12.06□□□□□ -0.48
IFT140-202ENST00000397417 NME8Q8N427 588 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 TC2NQ8N9U0 490 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 FAM76AQ8TAV0 307 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 UNC45AQ9H3U1 944 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 TBK1Q9UHD2 729 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 ATP8A1Q9Y2Q0 1164 aa12.06□□□□□ -0.48
IFT140-202ENST00000397417 MED1Q15648 1581 aaPredicted RBP12.05□□□□□ -0.48
IFT140-202ENST00000397417 LRRD1A4D1F6 860 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 TNPO2O14787 897 aaKnown RBP12.05□□□□□ -0.48
IFT140-202ENST00000397417 EYA4O95677 639 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 EGFRP00533 1210 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 CYP11B2P19099 503 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 CTNNA1P35221 906 aaKnown RBP12.05□□□□□ -0.48
IFT140-202ENST00000397417 PRKCEQ02156 737 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 PSMD2Q13200 908 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 PPP6R3Q5H9R7 873 aaPredicted RBP12.05□□□□□ -0.48
IFT140-202ENST00000397417 FAM184BQ9ULE4 1060 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 ATP1A1P05023 1023 aaKnown RBP12.05□□□□□ -0.48
IFT140-202ENST00000397417 FERP16591 822 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 RNASELQ05823 741 aaKnown RBP12.05□□□□□ -0.48
IFT140-202ENST00000397417 EPHA7Q15375 998 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 AGBL3Q8NEM8 1001 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 TRAPPC12Q8WVT3 735 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 RNF25Q96BH1 459 aaPredicted RBP12.05□□□□□ -0.48
IFT140-202ENST00000397417 DDX47Q9H0S4 455 aaKnown RBP12.05□□□□□ -0.48
IFT140-202ENST00000397417 TYW1Q9NV66 732 aaKnown RBP12.05□□□□□ -0.48
IFT140-202ENST00000397417 TXNDC16Q9P2K2 825 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 SALL1Q9NSC2 1324 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 EML1O00423 815 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 OPA1O60313 960 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 SLC4A1P02730 911 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 RARBP10826 455 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 KRT15P19012 456 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 CLCN6P51797 869 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 MUM1L1Q5H9M0 696 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 DENND2CQ68D51 928 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 FAM117BQ6P1L5 589 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 TRPM4Q8TD43 1214 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 MTRQ99707 1265 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 ANAPC7Q9UJX3 599 aa12.05□□□□□ -0.48
IFT140-202ENST00000397417 TTC7AQ9ULT0 858 aaPredicted RBP12.05□□□□□ -0.48
IFT140-202ENST00000397417 YDJCA8MPS7 323 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 FGGP02679 453 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 MYL1P05976 194 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 TCP1P17987 556 aaKnown RBP12.04□□□□□ -0.48
IFT140-202ENST00000397417 KRT81Q14533 505 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 GLRA4Q5JXX5 417 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 RPUSD2Q8IZ73 545 aaKnown RBP12.04□□□□□ -0.48
IFT140-202ENST00000397417 CCDC89Q8N998 374 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 RPF1Q9H9Y2 349 aaKnown RBP12.04□□□□□ -0.48
IFT140-202ENST00000397417 LIMA1Q9UHB6 759 aaKnown RBP12.04□□□□□ -0.48
IFT140-202ENST00000397417 PITPNM2Q9BZ72 1349 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms