RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 DRP2Q13474 957 aa26.16■■□□□ 1.78
TSPAN4-203ENST00000397397 PNOCQ13519 176 aa26.16■■□□□ 1.78
TSPAN4-203ENST00000397397 CAMK4Q16566 473 aa26.16■■□□□ 1.78
TSPAN4-203ENST00000397397 TRIM60Q495X7 471 aa26.16■■□□□ 1.78
TSPAN4-203ENST00000397397 FAM126BQ8IXS8 530 aa26.16■■□□□ 1.78
TSPAN4-203ENST00000397397 DNAJC19Q96DA6 116 aa26.16■■□□□ 1.78
TSPAN4-203ENST00000397397 CTAGE1Q96RT6 745 aa26.16■■□□□ 1.78
TSPAN4-203ENST00000397397 NUP62CLQ9H1M0 184 aa26.16■■□□□ 1.78
TSPAN4-203ENST00000397397 SUCLA2Q9P2R7 463 aaPredicted RBP26.16■■□□□ 1.78
TSPAN4-203ENST00000397397 ODF2LQ9ULJ1 636 aa26.16■■□□□ 1.78
TSPAN4-203ENST00000397397 MYH11P35749 1972 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 RSPH10B2B2RC85 870 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 TLR3O15455 904 aaKnown RBP26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 TBCAO75347 108 aaKnown RBP26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 RSPH10BP0C881 870 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 IDEP14735 1019 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 RTP1P59025 263 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 PTK7Q13308 1070 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 LRRC26Q2I0M4 334 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 TAF2Q6P1X5 1199 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 CNNM4Q6P4Q7 775 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 SERINC5Q86VE9 423 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 KIFAP3Q92845 792 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 DRC1Q96MC2 740 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 MAP7D2Q96T17 732 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 ZHX3Q9H4I2 956 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 AKT3Q9Y243 479 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 ATP11BQ9Y2G3 1177 aa26.15■■□□□ 1.78
TSPAN4-203ENST00000397397 FAM13AO94988 1023 aa26.14■■□□□ 1.78
TSPAN4-203ENST00000397397 ARL2P36404 184 aa26.14■■□□□ 1.78
TSPAN4-203ENST00000397397 KLHL40Q2TBA0 621 aa26.14■■□□□ 1.78
TSPAN4-203ENST00000397397 SKOR2Q2VWA4 1001 aaPredicted RBP26.14■■□□□ 1.78
TSPAN4-203ENST00000397397 ANKRD33Q7Z3H0 272 aa26.14■■□□□ 1.78
TSPAN4-203ENST00000397397 KIAA0319LQ8IZA0 1049 aa26.14■■□□□ 1.78
TSPAN4-203ENST00000397397 DAW1Q8N136 415 aa26.14■■□□□ 1.78
TSPAN4-203ENST00000397397 DNAJB3Q8WWF6 145 aa26.14■■□□□ 1.78
TSPAN4-203ENST00000397397 PSPC1Q8WXF1 523 aaKnown RBP26.14■■□□□ 1.78
TSPAN4-203ENST00000397397 SFI1A8K8P3 1242 aa26.14■■□□□ 1.77
TSPAN4-203ENST00000397397 DCDC2CA8MYV0 355 aa26.14■■□□□ 1.77
TSPAN4-203ENST00000397397 CD4P01730 458 aa26.14■■□□□ 1.77
TSPAN4-203ENST00000397397 TLE2Q04725 743 aa26.14■■□□□ 1.77
TSPAN4-203ENST00000397397 DPYDQ12882 1025 aa26.14■■□□□ 1.77
TSPAN4-203ENST00000397397 MAPK7Q13164 816 aa26.14■■□□□ 1.77
TSPAN4-203ENST00000397397 PRPF31Q8WWY3 499 aaKnown RBP26.14■■□□□ 1.77
TSPAN4-203ENST00000397397 CCDC65Q8IXS2 484 aa26.13■■□□□ 1.77
TSPAN4-203ENST00000397397 ASAP3Q8TDY4 903 aa26.13■■□□□ 1.77
TSPAN4-203ENST00000397397 ERCC4Q92889 916 aaPredicted RBP26.13■■□□□ 1.77
TSPAN4-203ENST00000397397 WNT8BQ93098 351 aa26.13■■□□□ 1.77
TSPAN4-203ENST00000397397 TOX2Q96NM4 488 aa26.13■■□□□ 1.77
TSPAN4-203ENST00000397397 PANK4Q9NVE7 773 aa26.13■■□□□ 1.77
TSPAN4-203ENST00000397397 COL4A3BPQ9Y5P4 624 aa26.13■■□□□ 1.77
TSPAN4-203ENST00000397397 PDE4DIPQ5VU43 2346 aa26.12■■□□□ 1.77
TSPAN4-203ENST00000397397 TRAK2O60296 914 aa26.12■■□□□ 1.77
TSPAN4-203ENST00000397397 VTNP04004 478 aa26.12■■□□□ 1.77
TSPAN4-203ENST00000397397 CAVIN1Q6NZI2 390 aaKnown RBP26.12■■□□□ 1.77
TSPAN4-203ENST00000397397 UNC13DQ70J99 1090 aa26.12■■□□□ 1.77
TSPAN4-203ENST00000397397 RSPH3Q86UC2 560 aa26.12■■□□□ 1.77
TSPAN4-203ENST00000397397 RHPN2Q8IUC4 686 aa26.12■■□□□ 1.77
TSPAN4-203ENST00000397397 DHX38Q92620 1227 aaKnown RBP26.12■■□□□ 1.77
TSPAN4-203ENST00000397397 IFT74Q96LB3 600 aa26.12■■□□□ 1.77
TSPAN4-203ENST00000397397 PARVGQ9HBI0 331 aa26.12■■□□□ 1.77
TSPAN4-203ENST00000397397 SMC2O95347 1197 aa26.11■■□□□ 1.77
TSPAN4-203ENST00000397397 RPN1P04843 607 aaKnown RBP26.11■■□□□ 1.77
TSPAN4-203ENST00000397397 GLRA2P23416 452 aa26.11■■□□□ 1.77
TSPAN4-203ENST00000397397 LAMTOR4Q0VGL1 99 aa26.11■■□□□ 1.77
TSPAN4-203ENST00000397397 MXD4Q14582 209 aaPredicted RBP26.11■■□□□ 1.77
TSPAN4-203ENST00000397397 CCDC183Q5T5S1 534 aa26.11■■□□□ 1.77
TSPAN4-203ENST00000397397 NME8Q8N427 588 aa26.11■■□□□ 1.77
TSPAN4-203ENST00000397397 MYCT1Q8N699 235 aa26.11■■□□□ 1.77
TSPAN4-203ENST00000397397 BSNDQ8WZ55 320 aa26.11■■□□□ 1.77
TSPAN4-203ENST00000397397 PVALEFA0A1B0GWK0 134 aa26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 FRMD3A2A2Y4 597 aa26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 ASAP2O43150 1006 aa26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 KLRC4O43908 158 aa26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 RPLP2P05387 115 aaKnown RBP26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 PLS3P13797 630 aa26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 GAP43P17677 238 aa26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 ZNF131P52739 623 aa26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 TMEM62Q0P6H9 643 aa26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 KSR1Q8IVT5 923 aa26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 SMARCE1Q969G3 411 aa26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 CCDC47Q96A33 483 aaKnown RBP26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 SYAP1Q96A49 352 aaPredicted RBP26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 PPP1R16BQ96T49 567 aa26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 TMEM63CQ9P1W3 806 aa26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 PCDHA5Q9Y5H7 936 aa26.1■■□□□ 1.77
TSPAN4-203ENST00000397397 THPOP40225 353 aa26.09■■□□□ 1.77
TSPAN4-203ENST00000397397 PEX3P56589 373 aa26.09■■□□□ 1.77
TSPAN4-203ENST00000397397 FAAP100Q0VG06 881 aa26.09■■□□□ 1.77
TSPAN4-203ENST00000397397 COASYQ13057 564 aa26.09■■□□□ 1.77
TSPAN4-203ENST00000397397 PPP2R5AQ15172 486 aa26.09■■□□□ 1.77
TSPAN4-203ENST00000397397 TRIM71Q2Q1W2 868 aaKnown RBP26.09■■□□□ 1.77
TSPAN4-203ENST00000397397 HERC4Q5GLZ8 1057 aaPredicted RBP26.09■■□□□ 1.77
TSPAN4-203ENST00000397397 RPAINQ86UA6 219 aa26.09■■□□□ 1.77
TSPAN4-203ENST00000397397 SFR1Q86XK3 245 aa26.09■■□□□ 1.77
TSPAN4-203ENST00000397397 ZNF668Q96K58 619 aaPredicted RBP26.09■■□□□ 1.77
TSPAN4-203ENST00000397397 C17orf75Q9HAS0 396 aa26.09■■□□□ 1.77
TSPAN4-203ENST00000397397 LARSQ9P2J5 1176 aaKnown RBP26.09■■□□□ 1.77
TSPAN4-203ENST00000397397 SRGAP2CP0DJJ0 459 aa26.08■■□□□ 1.77
TSPAN4-203ENST00000397397 NLRP11P59045 1033 aaKnown RBP26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms