RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 NPTX2P47972 431 aa14.02□□□□□ -0.17
TRIM39-204ENST00000396548 GRM1Q13255 1194 aa14.02□□□□□ -0.17
TRIM39-204ENST00000396548 ALCAMQ13740 583 aa14.02□□□□□ -0.17
TRIM39-204ENST00000396548 FAM102BQ5T8I3 360 aa14.02□□□□□ -0.17
TRIM39-204ENST00000396548 PAXIP1Q6ZW49 1069 aaPredicted RBP14.02□□□□□ -0.17
TRIM39-204ENST00000396548 TRMT1LQ7Z2T5 733 aaKnown RBP14.02□□□□□ -0.17
TRIM39-204ENST00000396548 EEF2KMTQ96G04 330 aa14.02□□□□□ -0.17
TRIM39-204ENST00000396548 TSG101Q99816 390 aa14.02□□□□□ -0.17
TRIM39-204ENST00000396548 ADGRA3Q8IWK6 1321 aa14.02□□□□□ -0.17
TRIM39-204ENST00000396548 HTTP42858 3142 aa14.02□□□□□ -0.17
TRIM39-204ENST00000396548 LGALS2P05162 132 aa14.02□□□□□ -0.17
TRIM39-204ENST00000396548 AFG1LQ8WV93 481 aa14.02□□□□□ -0.17
TRIM39-204ENST00000396548 AZI2Q9H6S1 392 aa14.02□□□□□ -0.17
TRIM39-204ENST00000396548 DMAC2Q9NW81 257 aa14.02□□□□□ -0.17
TRIM39-204ENST00000396548 GABRQQ9UN88 632 aa14.02□□□□□ -0.17
TRIM39-204ENST00000396548 CYP2B6P20813 491 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 CYP2C19P33261 490 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 PSMC4P43686 418 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 FCGRTP55899 365 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 MCCD1P59942 119 aaPredicted RBP14.01□□□□□ -0.17
TRIM39-204ENST00000396548 MKRN4PQ13434 485 aaPredicted RBP14.01□□□□□ -0.17
TRIM39-204ENST00000396548 FAM114A1Q8IWE2 563 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 TRPV1Q8NER1 839 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 TAB2Q9NYJ8 693 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 PCDHB13Q9Y5F0 798 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 TBC1D8O95759 1140 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 MMP3P08254 477 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 MAP2K2P36507 400 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 TNFAIP2Q03169 654 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 PTPN21Q16825 1174 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 CCDC186Q7Z3E2 898 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 BORCS6Q96GS4 357 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 TUBGCP2Q9BSJ2 902 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 RNPEPQ9H4A4 650 aa14.01□□□□□ -0.17
TRIM39-204ENST00000396548 ZHX1Q9UKY1 873 aaPredicted RBP14.01□□□□□ -0.17
TRIM39-204ENST00000396548 ITIH6Q6UXX5 1313 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 LGALS16A8MUM7 142 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 PPFIA4O75335 1185 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 ECM2O94769 699 aaPredicted RBP14□□□□□ -0.17
TRIM39-204ENST00000396548 VEGFBP49765 207 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 PEX3P56589 373 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 TAS1R3Q7RTX0 852 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 SLC17A8Q8NDX2 589 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 CCDC43Q96MW1 224 aaKnown RBP14□□□□□ -0.17
TRIM39-204ENST00000396548 RNF186Q9NXI6 227 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 A6NJR5 290 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 K7ENM7 598 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 FGFR1OPO95684 399 aaKnown RBP14□□□□□ -0.17
TRIM39-204ENST00000396548 TMC6Q7Z403 805 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 HAUS6Q7Z4H7 955 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 ASAP3Q8TDY4 903 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 POLR3FQ9H1D9 316 aaPredicted RBP14□□□□□ -0.17
TRIM39-204ENST00000396548 VPS16Q9H269 839 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 ARHGAP28Q9P2N2 729 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 Q9Y3F1 56 aa14□□□□□ -0.17
TRIM39-204ENST00000396548 CALUO43852 315 aaPredicted RBP13.99□□□□□ -0.17
TRIM39-204ENST00000396548 ARID5BQ14865 1188 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 SLC9A9Q8IVB4 645 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 LINC01465Q8N7H1 131 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 GLG1Q92896 1179 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 HVCN1Q96D96 273 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 ERAP1Q9NZ08 941 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRIM39-204ENST00000396548 CENPFP49454 3210 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 SLC16A4O15374 487 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 NR3C1P04150 777 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 GLRA2P23416 452 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 POLGP54098 1239 aaPredicted RBP13.99□□□□□ -0.17
TRIM39-204ENST00000396548 ADAM9Q13443 819 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 ARMCX5Q6P1M9 558 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 STXBP4Q6ZWJ1 553 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 C12orf56Q8IXR9 622 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 TRIB2Q92519 343 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 AGPAT3Q9NRZ7 376 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 HBP1O60381 514 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 MARK3P27448 753 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 SPECC1LQ69YQ0 1117 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 MAP4K3Q8IVH8 894 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 TRIM59Q8IWR1 403 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 DRC7Q8IY82 874 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 OR6J1Q8NGC5 347 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 TMEM143Q96AN5 459 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 TBX20Q9UMR3 447 aa13.99□□□□□ -0.17
TRIM39-204ENST00000396548 GOLGA6L6A8MZA4 724 aa13.98□□□□□ -0.17
TRIM39-204ENST00000396548 GNA14O95837 355 aa13.98□□□□□ -0.17
TRIM39-204ENST00000396548 TPM3P06753 285 aa13.98□□□□□ -0.17
TRIM39-204ENST00000396548 CYBAP13498 195 aa13.98□□□□□ -0.17
TRIM39-204ENST00000396548 NR2F2P24468 414 aa13.98□□□□□ -0.17
TRIM39-204ENST00000396548 DMP1Q13316 513 aaPredicted RBP13.98□□□□□ -0.17
TRIM39-204ENST00000396548 DRP2Q13474 957 aa13.98□□□□□ -0.17
TRIM39-204ENST00000396548 MYBPC2Q14324 1141 aa13.98□□□□□ -0.17
TRIM39-204ENST00000396548 CEP135Q66GS9 1140 aa13.98□□□□□ -0.17
TRIM39-204ENST00000396548 CACTINQ8WUQ7 758 aaKnown RBP13.98□□□□□ -0.17
TRIM39-204ENST00000396548 KIFC3Q9BVG8 833 aa13.98□□□□□ -0.17
TRIM39-204ENST00000396548 TMEM206Q9H813 350 aa13.98□□□□□ -0.17
TRIM39-204ENST00000396548 MAGEC2Q9UBF1 373 aaPredicted RBP13.98□□□□□ -0.17
TRIM39-204ENST00000396548 A0A1W2PQC6 194 aa13.98□□□□□ -0.17
TRIM39-204ENST00000396548 SLC16A3O15427 465 aaKnown RBP13.98□□□□□ -0.17
TRIM39-204ENST00000396548 AKAP3O75969 853 aa13.98□□□□□ -0.17
TRIM39-204ENST00000396548 SNRPFP62306 86 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms