RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 MTERF2Q49AM1 385 aa20.3■□□□□ 0.84
CXCL12-204ENST00000395793 NAALADL2Q58DX5 795 aa20.3■□□□□ 0.84
CXCL12-204ENST00000395793 FAM43BQ6ZT52 329 aaPredicted RBP20.3■□□□□ 0.84
CXCL12-204ENST00000395793 POF1BQ8WVV4 589 aa20.3■□□□□ 0.84
CXCL12-204ENST00000395793 NIFKQ9BYG3 293 aaKnown RBP20.3■□□□□ 0.84
CXCL12-204ENST00000395793 KCNMB3Q9NPA1 279 aa20.3■□□□□ 0.84
CXCL12-204ENST00000395793 TMEM161AQ9NX61 479 aa20.3■□□□□ 0.84
CXCL12-204ENST00000395793 FDPSP14324 419 aaKnown RBP20.29■□□□□ 0.84
CXCL12-204ENST00000395793 DARSP14868 501 aaKnown RBP20.29■□□□□ 0.84
CXCL12-204ENST00000395793 EIF4BP23588 611 aaKnown RBP20.29■□□□□ 0.84
CXCL12-204ENST00000395793 TMOD1P28289 359 aa20.29■□□□□ 0.84
CXCL12-204ENST00000395793 XKR3Q5GH77 459 aa20.29■□□□□ 0.84
CXCL12-204ENST00000395793 NECAB1Q8N987 351 aa20.29■□□□□ 0.84
CXCL12-204ENST00000395793 CWH43Q9H720 699 aa20.29■□□□□ 0.84
CXCL12-204ENST00000395793 IGKV6-21A0A0C4DH24 114 aa20.28■□□□□ 0.84
CXCL12-204ENST00000395793 CCDC194A0A1B0GVG4 234 aa20.28■□□□□ 0.84
CXCL12-204ENST00000395793 CSDE1O75534 798 aaKnown RBP20.28■□□□□ 0.84
CXCL12-204ENST00000395793 CLUL1Q15846 466 aa20.28■□□□□ 0.84
CXCL12-204ENST00000395793 ME3Q16798 604 aa20.28■□□□□ 0.84
CXCL12-204ENST00000395793 PIK3AP1Q6ZUJ8 805 aa20.28■□□□□ 0.84
CXCL12-204ENST00000395793 ANO5Q75V66 913 aa20.28■□□□□ 0.84
CXCL12-204ENST00000395793 NEK8Q86SG6 692 aa20.28■□□□□ 0.84
CXCL12-204ENST00000395793 IGFLR1Q9H665 355 aa20.28■□□□□ 0.84
CXCL12-204ENST00000395793 ELAC1Q9H777 363 aaKnown RBP20.28■□□□□ 0.84
CXCL12-204ENST00000395793 ATP6V0A4Q9HBG4 840 aa20.28■□□□□ 0.84
CXCL12-204ENST00000395793 C11orf16Q9NQ32 467 aa20.28■□□□□ 0.84
CXCL12-204ENST00000395793 TYW1Q9NV66 732 aaKnown RBP20.28■□□□□ 0.84
CXCL12-204ENST00000395793 WRAP73Q9P2S5 460 aaPredicted RBP20.28■□□□□ 0.84
CXCL12-204ENST00000395793 ORC3Q9UBD5 711 aaPredicted RBP20.28■□□□□ 0.84
CXCL12-204ENST00000395793 PPP2R5CQ13362 524 aa20.27■□□□□ 0.84
CXCL12-204ENST00000395793 PUS10Q3MIT2 529 aaKnown RBP20.27■□□□□ 0.84
CXCL12-204ENST00000395793 PLA2G4FQ68DD2 849 aa20.27■□□□□ 0.84
CXCL12-204ENST00000395793 PPP4R3AQ6IN85 833 aa20.27■□□□□ 0.84
CXCL12-204ENST00000395793 LRRC55Q6ZSA7 311 aa20.27■□□□□ 0.84
CXCL12-204ENST00000395793 ECHDC2Q86YB7 292 aa20.27■□□□□ 0.84
CXCL12-204ENST00000395793 GJD3Q8N144 294 aa20.27■□□□□ 0.84
CXCL12-204ENST00000395793 COLGALT1Q8NBJ5 622 aa20.27■□□□□ 0.84
CXCL12-204ENST00000395793 HAS1Q92839 578 aa20.27■□□□□ 0.84
CXCL12-204ENST00000395793 CASD1Q96PB1 797 aa20.27■□□□□ 0.84
CXCL12-204ENST00000395793 ATF7P17544 494 aaPredicted RBP20.26■□□□□ 0.83
CXCL12-204ENST00000395793 ST3GAL1Q11201 340 aa20.26■□□□□ 0.83
CXCL12-204ENST00000395793 NR5A1Q13285 461 aa20.26■□□□□ 0.83
CXCL12-204ENST00000395793 ADAM15Q13444 863 aa20.26■□□□□ 0.83
CXCL12-204ENST00000395793 SPOUT1Q5T280 376 aaKnown RBP20.26■□□□□ 0.83
CXCL12-204ENST00000395793 POTEDQ86YR6 584 aa20.26■□□□□ 0.83
CXCL12-204ENST00000395793 ZNF579Q8NAF0 562 aaKnown RBP20.26■□□□□ 0.83
CXCL12-204ENST00000395793 NLRP7Q8WX94 980 aa20.26■□□□□ 0.83
CXCL12-204ENST00000395793 TNFRSF25Q93038 417 aa20.26■□□□□ 0.83
CXCL12-204ENST00000395793 SCLT1Q96NL6 688 aa20.26■□□□□ 0.83
CXCL12-204ENST00000395793 C1QTNF1Q9BXJ1 281 aa20.26■□□□□ 0.83
CXCL12-204ENST00000395793 TMEM117Q9H0C3 514 aa20.26■□□□□ 0.83
CXCL12-204ENST00000395793 DDX11L8A8MPP1 907 aa20.25■□□□□ 0.83
CXCL12-204ENST00000395793 MBTPS2O43462 519 aa20.25■□□□□ 0.83
CXCL12-204ENST00000395793 NCK2O43639 380 aa20.25■□□□□ 0.83
CXCL12-204ENST00000395793 CCNT1O60563 726 aaKnown RBP20.25■□□□□ 0.83
CXCL12-204ENST00000395793 MAFO75444 373 aaPredicted RBP20.25■□□□□ 0.83
CXCL12-204ENST00000395793 FGF18O76093 207 aa20.25■□□□□ 0.83
CXCL12-204ENST00000395793 SEC24BO95487 1268 aa20.25■□□□□ 0.83
CXCL12-204ENST00000395793 GCFC2P16383 781 aaKnown RBP20.25■□□□□ 0.83
CXCL12-204ENST00000395793 NPEPPSP55786 919 aa20.25■□□□□ 0.83
CXCL12-204ENST00000395793 PSMC5P62195 406 aa20.25■□□□□ 0.83
CXCL12-204ENST00000395793 ZP2Q05996 745 aa20.25■□□□□ 0.83
CXCL12-204ENST00000395793 CLLU1OSQ5K130 101 aa20.25■□□□□ 0.83
CXCL12-204ENST00000395793 ZNF710Q8N1W2 664 aa20.25■□□□□ 0.83
CXCL12-204ENST00000395793 GTF3C6Q969F1 213 aa20.25■□□□□ 0.83
CXCL12-204ENST00000395793 FAM20AQ96MK3 541 aa20.25■□□□□ 0.83
CXCL12-204ENST00000395793 RNF216Q9NWF9 866 aaPredicted RBP20.25■□□□□ 0.83
CXCL12-204ENST00000395793 PCDHB12Q9Y5F1 795 aa20.25■□□□□ 0.83
CXCL12-204ENST00000395793 A0A087WZ62 844 aa20.24■□□□□ 0.83
CXCL12-204ENST00000395793 PI4K2BG5E9Z4 385 aa20.24■□□□□ 0.83
CXCL12-204ENST00000395793 GLP2RO95838 553 aa20.24■□□□□ 0.83
CXCL12-204ENST00000395793 ZSCAN20P17040 1043 aaPredicted RBP20.24■□□□□ 0.83
CXCL12-204ENST00000395793 NRIP1P48552 1158 aa20.24■□□□□ 0.83
CXCL12-204ENST00000395793 ERVFC1P60507 584 aa20.24■□□□□ 0.83
CXCL12-204ENST00000395793 SPIRE1Q08AE8 756 aa20.24■□□□□ 0.83
CXCL12-204ENST00000395793 ANKRD1Q15327 319 aa20.24■□□□□ 0.83
CXCL12-204ENST00000395793 ERICH6BQ5W0A0 696 aa20.24■□□□□ 0.83
CXCL12-204ENST00000395793 RBM23Q86U06 439 aaKnown RBP20.24■□□□□ 0.83
CXCL12-204ENST00000395793 ZNF598Q86UK7 904 aaKnown RBP20.24■□□□□ 0.83
CXCL12-204ENST00000395793 KSR1Q8IVT5 923 aa20.24■□□□□ 0.83
CXCL12-204ENST00000395793 NSUN7Q8NE18 718 aaKnown RBP20.24■□□□□ 0.83
CXCL12-204ENST00000395793 MSLNLQ96KJ4 702 aa20.24■□□□□ 0.83
CXCL12-204ENST00000395793 FDXACB1Q9BRP7 624 aaPredicted RBP20.24■□□□□ 0.83
CXCL12-204ENST00000395793 LRFN3Q9BTN0 628 aa20.24■□□□□ 0.83
CXCL12-204ENST00000395793 CLEC1BQ9P126 229 aa20.24■□□□□ 0.83
CXCL12-204ENST00000395793 FAM86C2PA6NEL3 165 aa20.23■□□□□ 0.83
CXCL12-204ENST00000395793 WNT7AO00755 349 aa20.23■□□□□ 0.83
CXCL12-204ENST00000395793 JAK2O60674 1132 aa20.23■□□□□ 0.83
CXCL12-204ENST00000395793 XBP1P17861 261 aa20.23■□□□□ 0.83
CXCL12-204ENST00000395793 SSTR3P32745 418 aaPredicted RBP20.23■□□□□ 0.83
CXCL12-204ENST00000395793 PBX3P40426 434 aa20.23■□□□□ 0.83
CXCL12-204ENST00000395793 QARSP47897 775 aaKnown RBP20.23■□□□□ 0.83
CXCL12-204ENST00000395793 RBM10P98175 930 aaKnown RBP20.23■□□□□ 0.83
CXCL12-204ENST00000395793 UBE3AQ05086 875 aa20.23■□□□□ 0.83
CXCL12-204ENST00000395793 THNSL1Q8IYQ7 743 aa20.23■□□□□ 0.83
CXCL12-204ENST00000395793 EFHBQ8N7U6 833 aa20.23■□□□□ 0.83
CXCL12-204ENST00000395793 RNF169Q8NCN4 708 aa20.23■□□□□ 0.83
CXCL12-204ENST00000395793 CYP26B1Q9NR63 512 aa20.23■□□□□ 0.83
CXCL12-204ENST00000395793 AAASQ9NRG9 546 aa20.23■□□□□ 0.83
CXCL12-204ENST00000395793 SUCLA2Q9P2R7 463 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 363.7 ms